data_6B73
#
_model_server_result.job_id            bWiXOJs06htbmMvHfMFecw 
_model_server_result.datetime_utc      '2025-02-28 22:19:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6b73 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":2001}' 
#
_entry.id    6B73 
#
_exptl.entry_id    6B73 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              554.419 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-[(5alpha,6beta)-17-(cyclopropylmethyl)-3-hydroxy-7,8-didehydro-4,5-epoxymorphinan-6-yl]-3-iodobenzamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          105.66 
_cell.angle_gamma         90 
_cell.entry_id            6B73 
_cell.length_a            62.31 
_cell.length_b            150.75 
_cell.length_c            100.28 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6B73 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 software_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,G 1 1 
B,C,H,I 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 191 A CYS 131 1_555 A SG CYS 270 A CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf2 B SG CYS 191 B CYS 131 1_555 B SG CYS 270 B CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf3 C SG CYS 24 C CYS 24 1_555 C SG CYS 96 C CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf4 D SG CYS 24 D CYS 24 1_555 D SG CYS 96 D CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
#
_chem_comp.formula           'C27 H27 I N2 O3' 
_chem_comp.formula_weight    554.419 
_chem_comp.id                CVV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-[(5alpha,6beta)-17-(cyclopropylmethyl)-3-hydroxy-7,8-didehydro-4,5-epoxymorphinan-6-yl]-3-iodobenzamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C15 C14 CVV doub 147 n y 
C15 C10 CVV sing 148 n y 
C14 C13 CVV sing 149 n y 
O2 C9 CVV doub 150 n n 
C9 C10 CVV sing 151 n n 
C9 N1 CVV sing 152 n n 
C10 C11 CVV doub 153 n y 
C13 C12 CVV doub 154 n y 
N1 C8 CVV sing 155 n n 
C8 C7 CVV sing 156 n n 
C8 C16 CVV sing 157 n n 
C11 C12 CVV sing 158 n y 
C12 I1 CVV sing 159 n n 
C7 C6 CVV doub 160 n n 
O4 C20 CVV sing 161 n n 
O3 C16 CVV sing 162 n n 
O3 C19 CVV sing 163 n n 
C16 C17 CVV sing 164 n n 
C20 C19 CVV doub 165 n y 
C20 C21 CVV sing 166 n y 
C19 C18 CVV sing 167 n y 
C6 C5 CVV sing 168 n n 
C17 C18 CVV sing 169 n n 
C17 C5 CVV sing 170 n n 
C17 C22 CVV sing 171 n n 
C21 C1 CVV doub 172 n y 
C18 C2 CVV doub 173 n y 
C5 C4 CVV sing 174 n n 
C22 C23 CVV sing 175 n n 
C1 C2 CVV sing 176 n y 
C2 C3 CVV sing 177 n n 
C4 C3 CVV sing 178 n n 
C4 N2 CVV sing 179 n n 
C23 N2 CVV sing 180 n n 
N2 C24 CVV sing 181 n n 
C24 C25 CVV sing 182 n n 
C25 C26 CVV sing 183 n n 
C25 C27 CVV sing 184 n n 
C26 C27 CVV sing 185 n n 
N1 H1 CVV sing 186 n n 
C4 H2 CVV sing 187 n n 
C5 H3 CVV sing 188 n n 
C6 H4 CVV sing 189 n n 
C7 H5 CVV sing 190 n n 
C8 H6 CVV sing 191 n n 
C13 H7 CVV sing 192 n n 
C15 H8 CVV sing 193 n n 
C21 H9 CVV sing 194 n n 
C22 H10 CVV sing 195 n n 
C22 H11 CVV sing 196 n n 
C24 H12 CVV sing 197 n n 
C24 H13 CVV sing 198 n n 
C26 H14 CVV sing 199 n n 
C26 H15 CVV sing 200 n n 
C1 H16 CVV sing 201 n n 
C11 H17 CVV sing 202 n n 
C14 H18 CVV sing 203 n n 
C16 H19 CVV sing 204 n n 
C23 H21 CVV sing 205 n n 
C23 H22 CVV sing 206 n n 
C25 H23 CVV sing 207 n n 
C27 H24 CVV sing 208 n n 
C27 H25 CVV sing 209 n n 
C3 H26 CVV sing 210 n n 
C3 H27 CVV sing 211 n n 
O4 H28 CVV sing 212 n n 
#
_atom_sites.entry_id                     6B73 
_atom_sites.fract_transf_matrix[1][1]    0.016049 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004499 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006633 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010357 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 CVV A 1 2001 2001 CVV LIG . 
F 4 CLR A 1 2002 2003 CLR CLR . 
G 5 OLA A 1 2003 2004 OLA OLA . 
H 3 CVV B 1 2001 2001 CVV LIG . 
I 4 CLR B 1 2002 2003 CLR CLR . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 CVV . . . H 3 54.93 17.499 6.972 1 85.07 ? N1 CVV 2001 B 1 
HETATM 2 C C4 CVV . . . H 3 57.153 16.692 2.784 1 76.95 ? C4 CVV 2001 B 1 
HETATM 3 C C5 CVV . . . H 3 56.523 16.774 4.173 1 78.63 ? C5 CVV 2001 B 1 
HETATM 4 C C6 CVV . . . H 3 57.577 16.807 5.267 1 78.99 ? C6 CVV 2001 B 1 
HETATM 5 C C7 CVV . . . H 3 57.167 16.554 6.522 1 80.44 ? C7 CVV 2001 B 1 
HETATM 6 C C8 CVV . . . H 3 55.7 16.224 6.848 1 82.38 ? C8 CVV 2001 B 1 
HETATM 7 C C10 CVV . . . H 3 54.303 19.594 7.834 1 90.06 ? C10 CVV 2001 B 1 
HETATM 8 C C13 CVV . . . H 3 52.957 22.062 7.532 1 93.16 ? C13 CVV 2001 B 1 
HETATM 9 C C15 CVV . . . H 3 53.887 20.338 8.95 1 90.29 ? C15 CVV 2001 B 1 
HETATM 10 C C17 CVV . . . H 3 55.629 15.535 4.325 1 80.37 ? C17 CVV 2001 B 1 
HETATM 11 C C20 CVV . . . H 3 56.859 12.275 5.181 1 84.25 ? C20 CVV 2001 B 1 
HETATM 12 C C21 CVV . . . H 3 57.936 12.043 4.305 1 83.76 ? C21 CVV 2001 B 1 
HETATM 13 C C22 CVV . . . H 3 54.496 15.599 3.296 1 78 ? C22 CVV 2001 B 1 
HETATM 14 C C24 CVV . . . H 3 56.538 17.063 0.429 1 72.01 ? C24 CVV 2001 B 1 
HETATM 15 C C26 CVV . . . H 3 58.795 18.236 -0.012 1 69.55 ? C26 CVV 2001 B 1 
HETATM 16 I I1 CVV . . . H 3 53.014 22.108 4.428 1 98.02 ? I1 CVV 2001 B 1 
HETATM 17 C C1 CVV . . . H 3 58.298 13.02 3.368 1 82.13 ? C1 CVV 2001 B 1 
HETATM 18 C C11 CVV . . . H 3 54.062 20.134 6.559 1 93.12 ? C11 CVV 2001 B 1 
HETATM 19 C C12 CVV . . . H 3 53.383 21.354 6.394 1 95.19 ? C12 CVV 2001 B 1 
HETATM 20 C C14 CVV . . . H 3 53.2 21.549 8.811 1 91.01 ? C14 CVV 2001 B 1 
HETATM 21 C C16 CVV . . . H 3 55.029 15.335 5.721 1 81.34 ? C16 CVV 2001 B 1 
HETATM 22 C C18 CVV . . . H 3 56.48 14.31 4.188 1 82 ? C18 CVV 2001 B 1 
HETATM 23 C C19 CVV . . . H 3 56.157 13.426 5.15 1 82.79 ? C19 CVV 2001 B 1 
HETATM 24 O O2 CVV . . . H 3 55.727 18.218 8.987 1 87 ? O2 CVV 2001 B 1 
HETATM 25 C C2 CVV . . . H 3 57.558 14.205 3.362 1 81.18 ? C2 CVV 2001 B 1 
HETATM 26 N N2 CVV . . . H 3 56.025 16.906 1.832 1 74.39 ? N2 CVV 2001 B 1 
HETATM 27 C C23 CVV . . . H 3 55.056 15.785 1.88 1 75.78 ? C23 CVV 2001 B 1 
HETATM 28 C C25 CVV . . . H 3 57.29 18.37 0.167 1 70.37 ? C25 CVV 2001 B 1 
HETATM 29 C C27 CVV . . . H 3 57.902 18.444 -1.217 1 69.96 ? C27 CVV 2001 B 1 
HETATM 30 O O3 CVV . . . H 3 55.132 13.88 5.945 1 81.74 ? O3 CVV 2001 B 1 
HETATM 31 C C3 CVV . . . H 3 57.917 15.34 2.451 1 78.83 ? C3 CVV 2001 B 1 
HETATM 32 O O4 CVV . . . H 3 56.483 11.346 6.109 1 85.25 ? O4 CVV 2001 B 1 
HETATM 33 C C9 CVV . . . H 3 55.02 18.392 7.993 1 87.18 ? C9 CVV 2001 B 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           291 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           33 
#