data_6B74 # _model_server_result.job_id WKWZqRcADTpsukWcZ6_ACQ _model_server_result.datetime_utc '2024-12-25 05:45:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6b74 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":307}' # _entry.id 6B74 # _exptl.entry_id 6B74 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6B74 _cell.length_a 80.289 _cell.length_b 80.289 _cell.length_c 121.731 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6B74 _symmetry.cell_setting ? _symmetry.Int_Tables_number 80 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 G N N ? 6 H N N ? 6 I N N ? 6 J N N # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 3 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 3 n C NAG 1 C 1 NAG B 301 NAG 3 n C NAG 2 C 2 NAG B 302 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 340 1_555 B SG CYS 114 B CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 B SG CYS 25 B CYS 42 1_555 B SG CYS 41 B CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf3 B SG CYS 33 B CYS 50 1_555 B SG CYS 103 B CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 B SG CYS 64 B CYS 77 1_555 B SG CYS 67 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf5 B SG CYS 128 B CYS 136 1_555 B SG CYS 197 B CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf6 B SG CYS 160 B CYS 168 1_555 B SG CYS 176 B CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf7 B SG CYS 187 B CYS 191 1_555 B SG CYS 218 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? covale ? covale1 B ND2 ASN 61 B ASN 74 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? covale ? covale2 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 sing # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 350 n n S O2 SO4 doub 351 n n S O3 SO4 sing 352 n n S O4 SO4 sing 353 n n # _atom_sites.entry_id 6B74 _atom_sites.fract_transf_matrix[1][1] 0.012455 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012455 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008215 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 BEN B 1 301 251 BEN BEN . E 5 IOD B 1 302 252 IOD IOD . F 5 IOD B 1 303 253 IOD IOD . G 6 SO4 B 1 304 254 SO4 SO4 . H 6 SO4 B 1 305 255 SO4 SO4 . I 6 SO4 B 1 306 256 SO4 SO4 . J 6 SO4 B 1 307 257 SO4 SO4 . K 7 GOL B 1 308 258 GOL GOL . L 8 HOH B 1 401 36 HOH HOH . L 8 HOH B 2 402 22 HOH HOH . L 8 HOH B 3 403 41 HOH HOH . L 8 HOH B 4 404 35 HOH HOH . L 8 HOH B 5 405 44 HOH HOH . L 8 HOH B 6 406 13 HOH HOH . L 8 HOH B 7 407 15 HOH HOH . L 8 HOH B 8 408 33 HOH HOH . L 8 HOH B 9 409 28 HOH HOH . L 8 HOH B 10 410 40 HOH HOH . L 8 HOH B 11 411 7 HOH HOH . L 8 HOH B 12 412 8 HOH HOH . L 8 HOH B 13 413 30 HOH HOH . L 8 HOH B 14 414 29 HOH HOH . L 8 HOH B 15 415 27 HOH HOH . L 8 HOH B 16 416 32 HOH HOH . L 8 HOH B 17 417 25 HOH HOH . L 8 HOH B 18 418 5 HOH HOH . L 8 HOH B 19 419 10 HOH HOH . L 8 HOH B 20 420 49 HOH HOH . L 8 HOH B 21 421 51 HOH HOH . L 8 HOH B 22 422 24 HOH HOH . L 8 HOH B 23 423 2 HOH HOH . L 8 HOH B 24 424 18 HOH HOH . L 8 HOH B 25 425 16 HOH HOH . L 8 HOH B 26 426 23 HOH HOH . L 8 HOH B 27 427 45 HOH HOH . L 8 HOH B 28 428 4 HOH HOH . L 8 HOH B 29 429 20 HOH HOH . L 8 HOH B 30 430 9 HOH HOH . L 8 HOH B 31 431 31 HOH HOH . L 8 HOH B 32 432 19 HOH HOH . L 8 HOH B 33 433 3 HOH HOH . L 8 HOH B 34 434 43 HOH HOH . L 8 HOH B 35 435 46 HOH HOH . L 8 HOH B 36 436 12 HOH HOH . L 8 HOH B 37 437 50 HOH HOH . L 8 HOH B 38 438 1 HOH HOH . L 8 HOH B 39 439 48 HOH HOH . L 8 HOH B 40 440 37 HOH HOH . L 8 HOH B 41 441 6 HOH HOH . L 8 HOH B 42 442 38 HOH HOH . L 8 HOH B 43 443 47 HOH HOH . L 8 HOH B 44 444 21 HOH HOH . L 8 HOH B 45 445 14 HOH HOH . L 8 HOH B 46 446 34 HOH HOH . L 8 HOH B 47 447 42 HOH HOH . L 8 HOH B 48 448 39 HOH HOH . L 8 HOH B 49 449 11 HOH HOH . L 8 HOH B 50 450 17 HOH HOH . L 8 HOH B 51 451 26 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . J 6 62.098 -6.576 13.484 1 144.75 ? S SO4 307 B 1 HETATM 2 O O1 SO4 . . . J 6 60.991 -5.65 13.204 1 122.12 ? O1 SO4 307 B 1 HETATM 3 O O2 SO4 . . . J 6 62.716 -6.223 14.776 1 133.13 ? O2 SO4 307 B 1 HETATM 4 O O3 SO4 . . . J 6 61.573 -7.951 13.565 1 130.64 ? O3 SO4 307 B 1 HETATM 5 O O4 SO4 . . . J 6 63.096 -6.48 12.404 1 121.93 ? O4 SO4 307 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 34 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 19 _model_server_stats.element_count 5 #