data_6B77
#
_model_server_result.job_id            4zxyhoxezt78FAPtaZAJXw 
_model_server_result.datetime_utc      '2024-12-24 16:50:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6b77 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":303}' 
#
_entry.id    6B77 
#
_exptl.entry_id    6B77 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              126.904 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'IODIDE ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6B77 
_cell.length_a            79.402 
_cell.length_b            79.402 
_cell.length_c            122.246 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6B77 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        80 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 41' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 E N N 
? 5 F N N 
#
_pdbx_entity_branch.entity_id    3 
_pdbx_entity_branch.type         oligosaccharide 
#
_pdbx_entity_branch_link.link_id                     1 
_pdbx_entity_branch_link.details                     ? 
_pdbx_entity_branch_link.entity_id                   3 
_pdbx_entity_branch_link.entity_branch_list_num_1    2 
_pdbx_entity_branch_link.entity_branch_list_num_2    1 
_pdbx_entity_branch_link.comp_id_1                   NAG 
_pdbx_entity_branch_link.comp_id_2                   NAG 
_pdbx_entity_branch_link.atom_id_1                   C1 
_pdbx_entity_branch_link.leaving_atom_id_1           O1 
_pdbx_entity_branch_link.atom_stereo_config_1        . 
_pdbx_entity_branch_link.atom_id_2                   O4 
_pdbx_entity_branch_link.leaving_atom_id_2           HO4 
_pdbx_entity_branch_link.atom_stereo_config_2        . 
_pdbx_entity_branch_link.value_order                 sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
3 n C NAG 1 C 1 NAG B 301 NAG 
3 n C NAG 2 C 2 NAG B 302 NAG 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 A CYS 340 1_555 B SG CYS 114 B CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
disulf ? disulf2 B SG CYS 25 B CYS 42 1_555 B SG CYS 41 B CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
disulf ? disulf3 B SG CYS 33 B CYS 50 1_555 B SG CYS 103 B CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? 
disulf ? disulf4 B SG CYS 64 B CYS 77 1_555 B SG CYS 67 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? 
disulf ? disulf5 B SG CYS 160 B CYS 168 1_555 B SG CYS 176 B CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf6 B SG CYS 187 B CYS 191 1_555 B SG CYS 218 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
covale ? covale1 B ND2 ASN 61 B ASN 74 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.471 ? 
covale ? covale2 B OG SER 191 B SER 195 1_555 D B14 CWV . B CWV 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.562 ? 
covale ? covale3 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 sing 
#
_chem_comp.formula           'I -1' 
_chem_comp.formula_weight    126.904 
_chem_comp.id                IOD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'IODIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6B77 
_atom_sites.fract_transf_matrix[1][1]    0.012594 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012594 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00818 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 CWV B 1 301 251 CWV CD1 . 
E 5 IOD B 1 302 252 IOD IOD . 
F 5 IOD B 1 303 253 IOD IOD . 
G 6 SO4 B 1 304 254 SO4 SO4 . 
H 6 SO4 B 1 305 255 SO4 SO4 . 
I 6 SO4 B 1 306 256 SO4 SO4 . 
J 7 GOL B 1 307 257 GOL GOL . 
K 8 HOH A 1 401 71 HOH HOH . 
K 8 HOH A 2 402 95 HOH HOH . 
K 8 HOH A 3 403 72 HOH HOH . 
L 8 HOH B 1 401 61 HOH HOH . 
L 8 HOH B 2 402 73 HOH HOH . 
L 8 HOH B 3 403 22 HOH HOH . 
L 8 HOH B 4 404 18 HOH HOH . 
L 8 HOH B 5 405 4 HOH HOH . 
L 8 HOH B 6 406 96 HOH HOH . 
L 8 HOH B 7 407 11 HOH HOH . 
L 8 HOH B 8 408 3 HOH HOH . 
L 8 HOH B 9 409 21 HOH HOH . 
L 8 HOH B 10 410 80 HOH HOH . 
L 8 HOH B 11 411 17 HOH HOH . 
L 8 HOH B 12 412 89 HOH HOH . 
L 8 HOH B 13 413 37 HOH HOH . 
L 8 HOH B 14 414 35 HOH HOH . 
L 8 HOH B 15 415 91 HOH HOH . 
L 8 HOH B 16 416 34 HOH HOH . 
L 8 HOH B 17 417 68 HOH HOH . 
L 8 HOH B 18 418 7 HOH HOH . 
L 8 HOH B 19 419 1 HOH HOH . 
L 8 HOH B 20 420 67 HOH HOH . 
L 8 HOH B 21 421 16 HOH HOH . 
L 8 HOH B 22 422 77 HOH HOH . 
L 8 HOH B 23 423 46 HOH HOH . 
L 8 HOH B 24 424 65 HOH HOH . 
L 8 HOH B 25 425 69 HOH HOH . 
L 8 HOH B 26 426 75 HOH HOH . 
L 8 HOH B 27 427 59 HOH HOH . 
L 8 HOH B 28 428 93 HOH HOH . 
L 8 HOH B 29 429 78 HOH HOH . 
L 8 HOH B 30 430 10 HOH HOH . 
L 8 HOH B 31 431 8 HOH HOH . 
L 8 HOH B 32 432 31 HOH HOH . 
L 8 HOH B 33 433 44 HOH HOH . 
L 8 HOH B 34 434 13 HOH HOH . 
L 8 HOH B 35 435 48 HOH HOH . 
L 8 HOH B 36 436 54 HOH HOH . 
L 8 HOH B 37 437 39 HOH HOH . 
L 8 HOH B 38 438 53 HOH HOH . 
L 8 HOH B 39 439 5 HOH HOH . 
L 8 HOH B 40 440 64 HOH HOH . 
L 8 HOH B 41 441 6 HOH HOH . 
L 8 HOH B 42 442 57 HOH HOH . 
L 8 HOH B 43 443 20 HOH HOH . 
L 8 HOH B 44 444 2 HOH HOH . 
L 8 HOH B 45 445 15 HOH HOH . 
L 8 HOH B 46 446 9 HOH HOH . 
L 8 HOH B 47 447 66 HOH HOH . 
L 8 HOH B 48 448 12 HOH HOH . 
L 8 HOH B 49 449 24 HOH HOH . 
L 8 HOH B 50 450 79 HOH HOH . 
L 8 HOH B 51 451 19 HOH HOH . 
L 8 HOH B 52 452 62 HOH HOH . 
L 8 HOH B 53 453 63 HOH HOH . 
L 8 HOH B 54 454 36 HOH HOH . 
L 8 HOH B 55 455 45 HOH HOH . 
L 8 HOH B 56 456 40 HOH HOH . 
L 8 HOH B 57 457 33 HOH HOH . 
L 8 HOH B 58 458 23 HOH HOH . 
L 8 HOH B 59 459 97 HOH HOH . 
L 8 HOH B 60 460 94 HOH HOH . 
L 8 HOH B 61 461 60 HOH HOH . 
L 8 HOH B 62 462 85 HOH HOH . 
L 8 HOH B 63 463 14 HOH HOH . 
L 8 HOH B 64 464 38 HOH HOH . 
L 8 HOH B 65 465 51 HOH HOH . 
L 8 HOH B 66 466 27 HOH HOH . 
L 8 HOH B 67 467 92 HOH HOH . 
L 8 HOH B 68 468 70 HOH HOH . 
L 8 HOH B 69 469 30 HOH HOH . 
L 8 HOH B 70 470 41 HOH HOH . 
L 8 HOH B 71 471 43 HOH HOH . 
L 8 HOH B 72 472 49 HOH HOH . 
L 8 HOH B 73 473 32 HOH HOH . 
L 8 HOH B 74 474 52 HOH HOH . 
L 8 HOH B 75 475 50 HOH HOH . 
L 8 HOH B 76 476 82 HOH HOH . 
L 8 HOH B 77 477 56 HOH HOH . 
L 8 HOH B 78 478 87 HOH HOH . 
L 8 HOH B 79 479 84 HOH HOH . 
L 8 HOH B 80 480 86 HOH HOH . 
L 8 HOH B 81 481 74 HOH HOH . 
L 8 HOH B 82 482 58 HOH HOH . 
L 8 HOH B 83 483 42 HOH HOH . 
L 8 HOH B 84 484 88 HOH HOH . 
L 8 HOH B 85 485 83 HOH HOH . 
L 8 HOH B 86 486 25 HOH HOH . 
L 8 HOH B 87 487 76 HOH HOH . 
L 8 HOH B 88 488 29 HOH HOH . 
L 8 HOH B 89 489 55 HOH HOH . 
L 8 HOH B 90 490 90 HOH HOH . 
L 8 HOH B 91 491 81 HOH HOH . 
L 8 HOH B 92 492 28 HOH HOH . 
L 8 HOH B 93 493 26 HOH HOH . 
L 8 HOH B 94 494 47 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           I 
_atom_site.label_atom_id         I 
_atom_site.label_comp_id         IOD 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         F 
_atom_site.label_entity_id       5 
_atom_site.Cartn_x               106.901 
_atom_site.Cartn_y               69.228 
_atom_site.Cartn_z               37.25 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        68.09 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          I 
_atom_site.auth_comp_id          IOD 
_atom_site.auth_seq_id           303 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           328 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           1 
#