data_6B7F # _model_server_result.job_id WyC3RkhqOqgQUyO_BJwgrg _model_server_result.datetime_utc '2025-09-21 03:00:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6b7f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 6B7F # _exptl.entry_id 6B7F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6B7F _cell.length_a 135.78 _cell.length_b 135.78 _cell.length_c 135.78 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6B7F _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA hexameric 6 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N 1 1,2,3 A,B,C,D,E,F,G,H,I,J,K,L,M,N 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_467 z-1,-x+1,-y+2 0 0 1 -1 0 0 0 -1 0 -135.78 135.78 271.56 3 'crystal symmetry operation' 12_676 -y+1,-z+2,x+1 0 -1 0 0 0 -1 1 0 0 135.78 271.56 135.78 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 G O DMS . B DMS 201 1_555 H K K . B K 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.332 ? metalc ? metalc2 H K K . B K 202 1_555 N O HOH . B HOH 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.014 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 108 n n S C1 DMS sing 109 n n S C2 DMS sing 110 n n C1 H11 DMS sing 111 n n C1 H12 DMS sing 112 n n C1 H13 DMS sing 113 n n C2 H21 DMS sing 114 n n C2 H22 DMS sing 115 n n C2 H23 DMS sing 116 n n # _atom_sites.entry_id 6B7F _atom_sites.fract_transf_matrix[1][1] 0.007365 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007365 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007365 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DMS A 1 201 1 DMS DMS . D 3 TRS A 1 202 1 TRS TRS . E 4 SO4 A 1 203 1 SO4 SO4 . F 5 POP A 1 204 4 POP POP . G 2 DMS B 1 201 2 DMS DMS . H 6 K B 1 202 1 K K . I 7 CW4 B 1 203 1 CW4 LI1 . J 4 SO4 B 1 204 2 SO4 SO4 . K 4 SO4 B 1 205 3 SO4 SO4 . L 4 SO4 B 1 206 4 SO4 SO4 . M 8 HOH A 1 301 171 HOH HOH . M 8 HOH A 2 302 72 HOH HOH . M 8 HOH A 3 303 258 HOH HOH . M 8 HOH A 4 304 161 HOH HOH . M 8 HOH A 5 305 30 HOH HOH . M 8 HOH A 6 306 228 HOH HOH . M 8 HOH A 7 307 14 HOH HOH . M 8 HOH A 8 308 227 HOH HOH . M 8 HOH A 9 309 233 HOH HOH . M 8 HOH A 10 310 20 HOH HOH . M 8 HOH A 11 311 199 HOH HOH . M 8 HOH A 12 312 19 HOH HOH . M 8 HOH A 13 313 185 HOH HOH . M 8 HOH A 14 314 249 HOH HOH . M 8 HOH A 15 315 4 HOH HOH . M 8 HOH A 16 316 3 HOH HOH . M 8 HOH A 17 317 1 HOH HOH . M 8 HOH A 18 318 39 HOH HOH . M 8 HOH A 19 319 229 HOH HOH . M 8 HOH A 20 320 56 HOH HOH . M 8 HOH A 21 321 103 HOH HOH . M 8 HOH A 22 322 87 HOH HOH . M 8 HOH A 23 323 18 HOH HOH . M 8 HOH A 24 324 151 HOH HOH . M 8 HOH A 25 325 86 HOH HOH . M 8 HOH A 26 326 75 HOH HOH . M 8 HOH A 27 327 116 HOH HOH . M 8 HOH A 28 328 70 HOH HOH . M 8 HOH A 29 329 13 HOH HOH . M 8 HOH A 30 330 35 HOH HOH . M 8 HOH A 31 331 74 HOH HOH . M 8 HOH A 32 332 21 HOH HOH . M 8 HOH A 33 333 69 HOH HOH . M 8 HOH A 34 334 82 HOH HOH . M 8 HOH A 35 335 55 HOH HOH . M 8 HOH A 36 336 184 HOH HOH . M 8 HOH A 37 337 67 HOH HOH . M 8 HOH A 38 338 89 HOH HOH . M 8 HOH A 39 339 2 HOH HOH . M 8 HOH A 40 340 8 HOH HOH . M 8 HOH A 41 341 53 HOH HOH . M 8 HOH A 42 342 50 HOH HOH . M 8 HOH A 43 343 29 HOH HOH . M 8 HOH A 44 344 26 HOH HOH . M 8 HOH A 45 345 272 HOH HOH . M 8 HOH A 46 346 40 HOH HOH . M 8 HOH A 47 347 99 HOH HOH . M 8 HOH A 48 348 32 HOH HOH . M 8 HOH A 49 349 154 HOH HOH . M 8 HOH A 50 350 139 HOH HOH . M 8 HOH A 51 351 192 HOH HOH . M 8 HOH A 52 352 52 HOH HOH . M 8 HOH A 53 353 215 HOH HOH . M 8 HOH A 54 354 278 HOH HOH . M 8 HOH A 55 355 23 HOH HOH . M 8 HOH A 56 356 133 HOH HOH . M 8 HOH A 57 357 109 HOH HOH . M 8 HOH A 58 358 275 HOH HOH . M 8 HOH A 59 359 128 HOH HOH . M 8 HOH A 60 360 211 HOH HOH . M 8 HOH A 61 361 263 HOH HOH . M 8 HOH A 62 362 212 HOH HOH . M 8 HOH A 63 363 137 HOH HOH . M 8 HOH A 64 364 181 HOH HOH . M 8 HOH A 65 365 254 HOH HOH . M 8 HOH A 66 366 48 HOH HOH . M 8 HOH A 67 367 261 HOH HOH . M 8 HOH A 68 368 264 HOH HOH . M 8 HOH A 69 369 157 HOH HOH . M 8 HOH A 70 370 256 HOH HOH . M 8 HOH A 71 371 273 HOH HOH . M 8 HOH A 72 372 242 HOH HOH . M 8 HOH A 73 373 138 HOH HOH . M 8 HOH A 74 374 167 HOH HOH . N 8 HOH B 1 301 107 HOH HOH . N 8 HOH B 2 302 85 HOH HOH . N 8 HOH B 3 303 41 HOH HOH . N 8 HOH B 4 304 6 HOH HOH . N 8 HOH B 5 305 124 HOH HOH . N 8 HOH B 6 306 12 HOH HOH . N 8 HOH B 7 307 277 HOH HOH . N 8 HOH B 8 308 172 HOH HOH . N 8 HOH B 9 309 125 HOH HOH . N 8 HOH B 10 310 7 HOH HOH . N 8 HOH B 11 311 80 HOH HOH . N 8 HOH B 12 312 262 HOH HOH . N 8 HOH B 13 313 31 HOH HOH . N 8 HOH B 14 314 37 HOH HOH . N 8 HOH B 15 315 61 HOH HOH . N 8 HOH B 16 316 241 HOH HOH . N 8 HOH B 17 317 28 HOH HOH . N 8 HOH B 18 318 57 HOH HOH . N 8 HOH B 19 319 120 HOH HOH . N 8 HOH B 20 320 104 HOH HOH . N 8 HOH B 21 321 276 HOH HOH . N 8 HOH B 22 322 126 HOH HOH . N 8 HOH B 23 323 9 HOH HOH . N 8 HOH B 24 324 236 HOH HOH . N 8 HOH B 25 325 105 HOH HOH . N 8 HOH B 26 326 68 HOH HOH . N 8 HOH B 27 327 36 HOH HOH . N 8 HOH B 28 328 118 HOH HOH . N 8 HOH B 29 329 71 HOH HOH . N 8 HOH B 30 330 123 HOH HOH . N 8 HOH B 31 331 34 HOH HOH . N 8 HOH B 32 332 266 HOH HOH . N 8 HOH B 33 333 194 HOH HOH . N 8 HOH B 34 334 106 HOH HOH . N 8 HOH B 35 335 188 HOH HOH . N 8 HOH B 36 336 193 HOH HOH . N 8 HOH B 37 337 25 HOH HOH . N 8 HOH B 38 338 179 HOH HOH . N 8 HOH B 39 339 88 HOH HOH . N 8 HOH B 40 340 42 HOH HOH . N 8 HOH B 41 341 255 HOH HOH . N 8 HOH B 42 342 110 HOH HOH . N 8 HOH B 43 343 113 HOH HOH . N 8 HOH B 44 344 173 HOH HOH . N 8 HOH B 45 345 33 HOH HOH . N 8 HOH B 46 346 93 HOH HOH . N 8 HOH B 47 347 47 HOH HOH . N 8 HOH B 48 348 274 HOH HOH . N 8 HOH B 49 349 51 HOH HOH . N 8 HOH B 50 350 16 HOH HOH . N 8 HOH B 51 351 79 HOH HOH . N 8 HOH B 52 352 84 HOH HOH . N 8 HOH B 53 353 77 HOH HOH . N 8 HOH B 54 354 260 HOH HOH . N 8 HOH B 55 355 204 HOH HOH . N 8 HOH B 56 356 201 HOH HOH . N 8 HOH B 57 357 76 HOH HOH . N 8 HOH B 58 358 98 HOH HOH . N 8 HOH B 59 359 267 HOH HOH . N 8 HOH B 60 360 11 HOH HOH . N 8 HOH B 61 361 134 HOH HOH . N 8 HOH B 62 362 66 HOH HOH . N 8 HOH B 63 363 24 HOH HOH . N 8 HOH B 64 364 91 HOH HOH . N 8 HOH B 65 365 253 HOH HOH . N 8 HOH B 66 366 131 HOH HOH . N 8 HOH B 67 367 159 HOH HOH . N 8 HOH B 68 368 210 HOH HOH . N 8 HOH B 69 369 271 HOH HOH . N 8 HOH B 70 370 65 HOH HOH . N 8 HOH B 71 371 208 HOH HOH . N 8 HOH B 72 372 22 HOH HOH . N 8 HOH B 73 373 152 HOH HOH . N 8 HOH B 74 374 43 HOH HOH . N 8 HOH B 75 375 238 HOH HOH . N 8 HOH B 76 376 240 HOH HOH . N 8 HOH B 77 377 160 HOH HOH . N 8 HOH B 78 378 59 HOH HOH . N 8 HOH B 79 379 183 HOH HOH . N 8 HOH B 80 380 117 HOH HOH . N 8 HOH B 81 381 73 HOH HOH . N 8 HOH B 82 382 81 HOH HOH . N 8 HOH B 83 383 114 HOH HOH . N 8 HOH B 84 384 136 HOH HOH . N 8 HOH B 85 385 165 HOH HOH . N 8 HOH B 86 386 248 HOH HOH . N 8 HOH B 87 387 269 HOH HOH . N 8 HOH B 88 388 265 HOH HOH . N 8 HOH B 89 389 225 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . C 2 44.159 112.049 180.599 1 93.81 ? S DMS 201 A 1 HETATM 2 O O DMS . . . C 2 44.564 111.225 181.781 1 98.23 ? O DMS 201 A 1 HETATM 3 C C1 DMS . . . C 2 45.212 111.617 179.185 1 92.65 ? C1 DMS 201 A 1 HETATM 4 C C2 DMS . . . C 2 42.544 111.5 179.986 1 89.31 ? C2 DMS 201 A 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #