data_6B7H # _model_server_result.job_id OF2xpsoE9FE_zNR6fulDJg _model_server_result.datetime_utc '2025-07-08 02:55:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6b7h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":806}' # _entry.id 6B7H # _exptl.entry_id 6B7H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 334.324 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(1S,2S,4S,5R,6S)-2-amino-4-[(3-methoxybenzene-1-carbonyl)amino]bicyclo[3.1.0]hexane-2,6-dicarboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6B7H _cell.length_a 80.081 _cell.length_b 80.081 _cell.length_c 161.887 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6B7H _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B NAG 1 B 1 NAG A 801 NAG 2 n B NAG 2 B 2 NAG A 804 NAG 2 n C NAG 1 C 1 NAG A 802 NAG 2 n C NAG 2 C 2 NAG A 805 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 59 A CYS 57 1_555 A SG CYS 101 A CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf2 A SG CYS 363 A CYS 361 1_555 A SG CYS 375 A CYS 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf3 A SG CYS 414 A CYS 412 1_555 A SG CYS 421 A CYS 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? covale ? covale1 A ND2 ASN 211 A ASN 209 1_555 B C1 NAG . B NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? covale ? covale2 A ND2 ASN 240 A ASN 238 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale3 A ND2 ASN 416 A ASN 414 1_555 D C1 NAG . A NAG 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale4 B O4 NAG . B NAG 1 1_555 B C1 NAG . B NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale5 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? metalc ? metalc1 A O ILE 81 A ILE 79 1_555 F CA CA . A CA 807 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.532 ? metalc ? metalc2 A O LEU 87 A LEU 85 1_555 F CA CA . A CA 807 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.167 ? metalc ? metalc3 A O LEU 88 A LEU 86 1_555 F CA CA . A CA 807 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? # _chem_comp.formula 'C16 H18 N2 O6' _chem_comp.formula_weight 334.324 _chem_comp.id CWY _chem_comp.mon_nstd_flag . _chem_comp.name '(1S,2S,4S,5R,6S)-2-amino-4-[(3-methoxybenzene-1-carbonyl)amino]bicyclo[3.1.0]hexane-2,6-dicarboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C2 CWY doub 70 n n C2 O1 CWY sing 71 n n C2 C1 CWY sing 72 n n N C1 CWY sing 73 n n C1 C CWY sing 74 n n C1 C3 CWY sing 75 n n C C7 CWY sing 76 n n C3 C4 CWY sing 77 n n C3 C6 CWY sing 78 n n C11 C10 CWY doub 79 n y C11 C12 CWY sing 80 n y C4 C6 CWY sing 81 n n C4 C5 CWY sing 82 n n C10 C9 CWY sing 83 n y C7 N1 CWY sing 84 n n C7 C6 CWY sing 85 n n N1 C8 CWY sing 86 n n C5 O3 CWY doub 87 n n C5 O2 CWY sing 88 n n C12 C13 CWY doub 89 n y C9 C8 CWY sing 90 n n C9 C14 CWY doub 91 n y C8 O4 CWY doub 92 n n C13 C14 CWY sing 93 n y C13 O5 CWY sing 94 n n O5 C15 CWY sing 95 n n O1 H1 CWY sing 96 n n C7 H2 CWY sing 97 n n O2 H3 CWY sing 98 n n C6 H4 CWY sing 99 n n N1 H5 CWY sing 100 n n C4 H6 CWY sing 101 n n C3 H7 CWY sing 102 n n C14 H8 CWY sing 103 n n C15 H9 CWY sing 104 n n C15 H10 CWY sing 105 n n C15 H11 CWY sing 106 n n C12 H12 CWY sing 107 n n C11 H13 CWY sing 108 n n C10 H14 CWY sing 109 n n C H15 CWY sing 110 n n C H16 CWY sing 111 n n N H17 CWY sing 112 n n N H18 CWY sing 113 n n # _atom_sites.entry_id 6B7H _atom_sites.fract_transf_matrix[1][1] 0.012487 _atom_sites.fract_transf_matrix[1][2] 0.00721 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014419 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006177 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 NAG A 1 805 803 NAG NAG . E 4 CWY A 1 806 1 CWY SX1 . F 5 CA A 1 807 1 CA CA . G 6 HOH A 1 901 172 HOH HOH . G 6 HOH A 2 902 171 HOH HOH . G 6 HOH A 3 903 180 HOH HOH . G 6 HOH A 4 904 197 HOH HOH . G 6 HOH A 5 905 199 HOH HOH . G 6 HOH A 6 906 36 HOH HOH . G 6 HOH A 7 907 1 HOH HOH . G 6 HOH A 8 908 35 HOH HOH . G 6 HOH A 9 909 28 HOH HOH . G 6 HOH A 10 910 179 HOH HOH . G 6 HOH A 11 911 8 HOH HOH . G 6 HOH A 12 912 15 HOH HOH . G 6 HOH A 13 913 198 HOH HOH . G 6 HOH A 14 914 47 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 CWY . . . E 4 -12.426 96.451 8.006 1 39.6 ? O1 CWY 806 A 1 HETATM 2 C C7 CWY . . . E 4 -12.353 94.504 10.711 1 43.61 ? C7 CWY 806 A 1 HETATM 3 O O2 CWY . . . E 4 -7.644 93.697 11.833 1 53.42 ? O2 CWY 806 A 1 HETATM 4 C C6 CWY . . . E 4 -10.986 95.051 10.928 1 43.61 ? C6 CWY 806 A 1 HETATM 5 C C1 CWY . . . E 4 -11.111 94.452 8.615 1 37.93 ? C1 CWY 806 A 1 HETATM 6 N N1 CWY . . . E 4 -13.169 95.686 10.745 1 43.16 ? N1 CWY 806 A 1 HETATM 7 C C5 CWY . . . E 4 -8.588 94.506 11.307 1 51.31 ? C5 CWY 806 A 1 HETATM 8 C C4 CWY . . . E 4 -9.835 94.144 10.694 1 44.61 ? C4 CWY 806 A 1 HETATM 9 C C3 CWY . . . E 4 -10.287 95.086 9.62 1 41.4 ? C3 CWY 806 A 1 HETATM 10 C C2 CWY . . . E 4 -11.654 95.407 7.643 1 41.99 ? C2 CWY 806 A 1 HETATM 11 O O4 CWY . . . E 4 -13.506 95.566 12.895 1 46.76 ? O4 CWY 806 A 1 HETATM 12 C C8 CWY . . . E 4 -13.661 96.139 11.911 1 45.24 ? C8 CWY 806 A 1 HETATM 13 C C9 CWY . . . E 4 -14.401 97.345 11.873 1 49.62 ? C9 CWY 806 A 1 HETATM 14 C C14 CWY . . . E 4 -14.62 98.009 13.035 1 49.06 ? C14 CWY 806 A 1 HETATM 15 C C13 CWY . . . E 4 -15.187 99.232 12.987 1 49.29 ? C13 CWY 806 A 1 HETATM 16 O O5 CWY . . . E 4 -15.339 100.016 14.028 1 48.77 ? O5 CWY 806 A 1 HETATM 17 C C15 CWY . . . E 4 -14.835 99.561 15.217 1 48.78 ? C15 CWY 806 A 1 HETATM 18 C C12 CWY . . . E 4 -15.577 99.766 11.829 1 50.53 ? C12 CWY 806 A 1 HETATM 19 C C11 CWY . . . E 4 -15.374 99.081 10.685 1 49.79 ? C11 CWY 806 A 1 HETATM 20 C C10 CWY . . . E 4 -14.775 97.86 10.704 1 51.76 ? C10 CWY 806 A 1 HETATM 21 C C CWY . . . E 4 -12.271 93.878 9.355 1 40.24 ? C CWY 806 A 1 HETATM 22 O O3 CWY . . . E 4 -8.35 95.833 11.334 1 53.78 ? O3 CWY 806 A 1 HETATM 23 N N CWY . . . E 4 -10.373 93.461 7.982 1 34.53 ? N CWY 806 A 1 HETATM 24 O O CWY . . . E 4 -11.426 95.302 6.317 1 47.08 ? O CWY 806 A 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 24 #