data_6B7K # _model_server_result.job_id SDb-QItAu9pS0vO6Pkg0AA _model_server_result.datetime_utc '2024-12-21 11:50:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6b7k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":302}' # _entry.id 6B7K # _exptl.entry_id 6B7K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.16 _cell.angle_gamma 90 _cell.entry_id 6B7K _cell.length_a 64.558 _cell.length_b 124.178 _cell.length_c 69.231 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6B7K _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,M 1 1 B,G,H,N 2 1 C,I,J,O 3 1 D,K,L,P 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 84 A ASP 74 1_555 F CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc2 A OD1 ASP 142 A ASP 132 1_555 F CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc3 A OD1 ASP 264 A ASP 254 1_555 F CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.734 ? metalc ? metalc4 A OD2 ASP 264 A ASP 254 1_555 F CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.514 ? metalc ? metalc5 E CA CA . A CA 301 1_555 M O HOH . A HOH 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.548 ? metalc ? metalc6 F CA CA . A CA 302 1_555 M O HOH . A HOH 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? metalc ? metalc7 B OD1 ASP 84 B ASP 74 1_555 H CA CA . B CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc8 B OD1 ASP 142 B ASP 132 1_555 H CA CA . B CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? metalc ? metalc9 B OD1 ASP 264 B ASP 254 1_555 H CA CA . B CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc10 B OD2 ASP 264 B ASP 254 1_555 H CA CA . B CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? metalc ? metalc11 G CA CA . B CA 301 1_555 N O HOH . B HOH 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.841 ? metalc ? metalc12 G CA CA . B CA 301 1_555 N O HOH . B HOH 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc13 C OD1 ASP 84 C ASP 74 1_555 J CA CA . C CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? metalc ? metalc14 C OD1 ASP 142 C ASP 132 1_555 J CA CA . C CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc15 C OD1 ASP 264 C ASP 254 1_555 J CA CA . C CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? metalc ? metalc16 C OD2 ASP 264 C ASP 254 1_555 J CA CA . C CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.61 ? metalc ? metalc17 I CA CA . C CA 301 1_555 O O HOH . C HOH 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc18 D OD1 ASP 84 D ASP 74 1_555 K CA CA . D CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc19 D OD1 ASP 142 D ASP 132 1_555 K CA CA . D CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc20 D OD1 ASP 264 D ASP 254 1_555 K CA CA . D CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.738 ? metalc ? metalc21 D OD2 ASP 264 D ASP 254 1_555 K CA CA . D CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.68 ? metalc ? metalc22 K CA CA . D CA 301 1_555 P O HOH . D HOH 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? metalc ? metalc23 L CA CA . D CA 302 1_555 P O HOH . D HOH 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc24 L CA CA . D CA 302 1_555 P O HOH . D HOH 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.61 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6B7K _atom_sites.fract_transf_matrix[1][1] 0.01549 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000313 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008053 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014447 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 CA A 1 301 292 CA CA . F 2 CA A 1 302 3 CA CA . G 2 CA B 1 301 292 CA CA . H 2 CA B 1 302 2 CA CA . I 2 CA C 1 301 292 CA CA . J 2 CA C 1 302 1 CA CA . K 2 CA D 1 301 4 CA CA . L 2 CA D 1 302 5 CA CA . M 3 HOH A 1 401 71 HOH HOH . M 3 HOH A 2 402 87 HOH HOH . M 3 HOH A 3 403 45 HOH HOH . M 3 HOH A 4 404 88 HOH HOH . M 3 HOH A 5 405 44 HOH HOH . M 3 HOH A 6 406 9 HOH HOH . M 3 HOH A 7 407 82 HOH HOH . M 3 HOH A 8 408 89 HOH HOH . M 3 HOH A 9 409 64 HOH HOH . M 3 HOH A 10 410 40 HOH HOH . M 3 HOH A 11 411 4 HOH HOH . M 3 HOH A 12 412 33 HOH HOH . M 3 HOH A 13 413 75 HOH HOH . M 3 HOH A 14 414 46 HOH HOH . M 3 HOH A 15 415 65 HOH HOH . M 3 HOH A 16 416 14 HOH HOH . M 3 HOH A 17 417 48 HOH HOH . M 3 HOH A 18 418 51 HOH HOH . M 3 HOH A 19 419 76 HOH HOH . M 3 HOH A 20 420 60 HOH HOH . M 3 HOH A 21 421 28 HOH HOH . M 3 HOH A 22 422 73 HOH HOH . M 3 HOH A 23 423 13 HOH HOH . M 3 HOH A 24 424 66 HOH HOH . M 3 HOH A 25 425 5 HOH HOH . M 3 HOH A 26 426 96 HOH HOH . M 3 HOH A 27 427 35 HOH HOH . M 3 HOH A 28 428 52 HOH HOH . N 3 HOH B 1 401 67 HOH HOH . N 3 HOH B 2 402 7 HOH HOH . N 3 HOH B 3 403 49 HOH HOH . N 3 HOH B 4 404 20 HOH HOH . N 3 HOH B 5 405 11 HOH HOH . N 3 HOH B 6 406 80 HOH HOH . N 3 HOH B 7 407 29 HOH HOH . N 3 HOH B 8 408 26 HOH HOH . N 3 HOH B 9 409 59 HOH HOH . N 3 HOH B 10 410 57 HOH HOH . N 3 HOH B 11 411 12 HOH HOH . N 3 HOH B 12 412 85 HOH HOH . N 3 HOH B 13 413 18 HOH HOH . N 3 HOH B 14 414 39 HOH HOH . N 3 HOH B 15 415 23 HOH HOH . N 3 HOH B 16 416 47 HOH HOH . N 3 HOH B 17 417 43 HOH HOH . N 3 HOH B 18 418 78 HOH HOH . N 3 HOH B 19 419 93 HOH HOH . N 3 HOH B 20 420 38 HOH HOH . N 3 HOH B 21 421 3 HOH HOH . N 3 HOH B 22 422 32 HOH HOH . N 3 HOH B 23 423 79 HOH HOH . N 3 HOH B 24 424 2 HOH HOH . N 3 HOH B 25 425 36 HOH HOH . N 3 HOH B 26 426 55 HOH HOH . N 3 HOH B 27 427 42 HOH HOH . N 3 HOH B 28 428 94 HOH HOH . N 3 HOH B 29 429 81 HOH HOH . O 3 HOH C 1 401 19 HOH HOH . O 3 HOH C 2 402 50 HOH HOH . O 3 HOH C 3 403 15 HOH HOH . O 3 HOH C 4 404 41 HOH HOH . O 3 HOH C 5 405 70 HOH HOH . O 3 HOH C 6 406 6 HOH HOH . O 3 HOH C 7 407 31 HOH HOH . O 3 HOH C 8 408 84 HOH HOH . O 3 HOH C 9 409 83 HOH HOH . O 3 HOH C 10 410 22 HOH HOH . O 3 HOH C 11 411 54 HOH HOH . O 3 HOH C 12 412 77 HOH HOH . O 3 HOH C 13 413 17 HOH HOH . O 3 HOH C 14 414 10 HOH HOH . O 3 HOH C 15 415 91 HOH HOH . O 3 HOH C 16 416 86 HOH HOH . O 3 HOH C 17 417 37 HOH HOH . P 3 HOH D 1 401 56 HOH HOH . P 3 HOH D 2 402 95 HOH HOH . P 3 HOH D 3 403 62 HOH HOH . P 3 HOH D 4 404 68 HOH HOH . P 3 HOH D 5 405 69 HOH HOH . P 3 HOH D 6 406 30 HOH HOH . P 3 HOH D 7 407 25 HOH HOH . P 3 HOH D 8 408 1 HOH HOH . P 3 HOH D 9 409 34 HOH HOH . P 3 HOH D 10 410 63 HOH HOH . P 3 HOH D 11 411 27 HOH HOH . P 3 HOH D 12 412 98 HOH HOH . P 3 HOH D 13 413 92 HOH HOH . P 3 HOH D 14 414 16 HOH HOH . P 3 HOH D 15 415 90 HOH HOH . P 3 HOH D 16 416 58 HOH HOH . P 3 HOH D 17 417 53 HOH HOH . P 3 HOH D 18 418 24 HOH HOH . P 3 HOH D 19 419 72 HOH HOH . P 3 HOH D 20 420 74 HOH HOH . P 3 HOH D 21 421 8 HOH HOH . P 3 HOH D 22 422 61 HOH HOH . P 3 HOH D 23 423 21 HOH HOH . P 3 HOH D 24 424 97 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x 3.183 _atom_site.Cartn_y -11.099 _atom_site.Cartn_z 77.528 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 34.09 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #