data_6B8T
#
_model_server_result.job_id            2dM3YHMLSltslJXY0sxglQ 
_model_server_result.datetime_utc      '2024-12-01 14:42:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6b8t 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":302}' 
#
_entry.id    6B8T 
#
_exptl.entry_id    6B8T 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6B8T 
_cell.length_a            89.44 
_cell.length_b            89.44 
_cell.length_c            106 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6B8T 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     6B8T 
_atom_sites.fract_transf_matrix[1][1]    0.011181 
_atom_sites.fract_transf_matrix[1][2]    0.006455 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01291 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009434 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 301 403 GOL GOL . 
C 2 GOL A 1 302 406 GOL GOL . 
D 2 GOL A 1 303 407 GOL GOL . 
E 3 TRS A 1 304 500 TRS TRS . 
F 4 HOH A 1 401 317 HOH HOH . 
F 4 HOH A 2 402 315 HOH HOH . 
F 4 HOH A 3 403 314 HOH HOH . 
F 4 HOH A 4 404 203 HOH HOH . 
F 4 HOH A 5 405 219 HOH HOH . 
F 4 HOH A 6 406 229 HOH HOH . 
F 4 HOH A 7 407 187 HOH HOH . 
F 4 HOH A 8 408 162 HOH HOH . 
F 4 HOH A 9 409 85 HOH HOH . 
F 4 HOH A 10 410 279 HOH HOH . 
F 4 HOH A 11 411 216 HOH HOH . 
F 4 HOH A 12 412 309 HOH HOH . 
F 4 HOH A 13 413 256 HOH HOH . 
F 4 HOH A 14 414 264 HOH HOH . 
F 4 HOH A 15 415 181 HOH HOH . 
F 4 HOH A 16 416 98 HOH HOH . 
F 4 HOH A 17 417 88 HOH HOH . 
F 4 HOH A 18 418 135 HOH HOH . 
F 4 HOH A 19 419 306 HOH HOH . 
F 4 HOH A 20 420 253 HOH HOH . 
F 4 HOH A 21 421 150 HOH HOH . 
F 4 HOH A 22 422 269 HOH HOH . 
F 4 HOH A 23 423 304 HOH HOH . 
F 4 HOH A 24 424 160 HOH HOH . 
F 4 HOH A 25 425 239 HOH HOH . 
F 4 HOH A 26 426 280 HOH HOH . 
F 4 HOH A 27 427 167 HOH HOH . 
F 4 HOH A 28 428 5 HOH HOH . 
F 4 HOH A 29 429 15 HOH HOH . 
F 4 HOH A 30 430 310 HOH HOH . 
F 4 HOH A 31 431 105 HOH HOH . 
F 4 HOH A 32 432 40 HOH HOH . 
F 4 HOH A 33 433 155 HOH HOH . 
F 4 HOH A 34 434 90 HOH HOH . 
F 4 HOH A 35 435 46 HOH HOH . 
F 4 HOH A 36 436 325 HOH HOH . 
F 4 HOH A 37 437 305 HOH HOH . 
F 4 HOH A 38 438 188 HOH HOH . 
F 4 HOH A 39 439 301 HOH HOH . 
F 4 HOH A 40 440 252 HOH HOH . 
F 4 HOH A 41 441 262 HOH HOH . 
F 4 HOH A 42 442 37 HOH HOH . 
F 4 HOH A 43 443 249 HOH HOH . 
F 4 HOH A 44 444 316 HOH HOH . 
F 4 HOH A 45 445 189 HOH HOH . 
F 4 HOH A 46 446 152 HOH HOH . 
F 4 HOH A 47 447 14 HOH HOH . 
F 4 HOH A 48 448 259 HOH HOH . 
F 4 HOH A 49 449 65 HOH HOH . 
F 4 HOH A 50 450 204 HOH HOH . 
F 4 HOH A 51 451 312 HOH HOH . 
F 4 HOH A 52 452 35 HOH HOH . 
F 4 HOH A 53 453 79 HOH HOH . 
F 4 HOH A 54 454 1 HOH HOH . 
F 4 HOH A 55 455 3 HOH HOH . 
F 4 HOH A 56 456 9 HOH HOH . 
F 4 HOH A 57 457 81 HOH HOH . 
F 4 HOH A 58 458 55 HOH HOH . 
F 4 HOH A 59 459 27 HOH HOH . 
F 4 HOH A 60 460 60 HOH HOH . 
F 4 HOH A 61 461 4 HOH HOH . 
F 4 HOH A 62 462 21 HOH HOH . 
F 4 HOH A 63 463 30 HOH HOH . 
F 4 HOH A 64 464 295 HOH HOH . 
F 4 HOH A 65 465 102 HOH HOH . 
F 4 HOH A 66 466 291 HOH HOH . 
F 4 HOH A 67 467 29 HOH HOH . 
F 4 HOH A 68 468 33 HOH HOH . 
F 4 HOH A 69 469 8 HOH HOH . 
F 4 HOH A 70 470 134 HOH HOH . 
F 4 HOH A 71 471 24 HOH HOH . 
F 4 HOH A 72 472 296 HOH HOH . 
F 4 HOH A 73 473 285 HOH HOH . 
F 4 HOH A 74 474 68 HOH HOH . 
F 4 HOH A 75 475 183 HOH HOH . 
F 4 HOH A 76 476 2 HOH HOH . 
F 4 HOH A 77 477 25 HOH HOH . 
F 4 HOH A 78 478 136 HOH HOH . 
F 4 HOH A 79 479 18 HOH HOH . 
F 4 HOH A 80 480 247 HOH HOH . 
F 4 HOH A 81 481 288 HOH HOH . 
F 4 HOH A 82 482 12 HOH HOH . 
F 4 HOH A 83 483 180 HOH HOH . 
F 4 HOH A 84 484 6 HOH HOH . 
F 4 HOH A 85 485 89 HOH HOH . 
F 4 HOH A 86 486 28 HOH HOH . 
F 4 HOH A 87 487 293 HOH HOH . 
F 4 HOH A 88 488 122 HOH HOH . 
F 4 HOH A 89 489 22 HOH HOH . 
F 4 HOH A 90 490 292 HOH HOH . 
F 4 HOH A 91 491 43 HOH HOH . 
F 4 HOH A 92 492 185 HOH HOH . 
F 4 HOH A 93 493 17 HOH HOH . 
F 4 HOH A 94 494 47 HOH HOH . 
F 4 HOH A 95 495 250 HOH HOH . 
F 4 HOH A 96 496 71 HOH HOH . 
F 4 HOH A 97 497 86 HOH HOH . 
F 4 HOH A 98 498 294 HOH HOH . 
F 4 HOH A 99 499 11 HOH HOH . 
F 4 HOH A 100 500 72 HOH HOH . 
F 4 HOH A 101 501 302 HOH HOH . 
F 4 HOH A 102 502 19 HOH HOH . 
F 4 HOH A 103 503 303 HOH HOH . 
F 4 HOH A 104 504 307 HOH HOH . 
F 4 HOH A 105 505 195 HOH HOH . 
F 4 HOH A 106 506 91 HOH HOH . 
F 4 HOH A 107 507 20 HOH HOH . 
F 4 HOH A 108 508 16 HOH HOH . 
F 4 HOH A 109 509 284 HOH HOH . 
F 4 HOH A 110 510 324 HOH HOH . 
F 4 HOH A 111 511 7 HOH HOH . 
F 4 HOH A 112 512 34 HOH HOH . 
F 4 HOH A 113 513 281 HOH HOH . 
F 4 HOH A 114 514 137 HOH HOH . 
F 4 HOH A 115 515 290 HOH HOH . 
F 4 HOH A 116 516 113 HOH HOH . 
F 4 HOH A 117 517 299 HOH HOH . 
F 4 HOH A 118 518 23 HOH HOH . 
F 4 HOH A 119 519 87 HOH HOH . 
F 4 HOH A 120 520 149 HOH HOH . 
F 4 HOH A 121 521 63 HOH HOH . 
F 4 HOH A 122 522 13 HOH HOH . 
F 4 HOH A 123 523 70 HOH HOH . 
F 4 HOH A 124 524 78 HOH HOH . 
F 4 HOH A 125 525 31 HOH HOH . 
F 4 HOH A 126 526 131 HOH HOH . 
F 4 HOH A 127 527 10 HOH HOH . 
F 4 HOH A 128 528 41 HOH HOH . 
F 4 HOH A 129 529 237 HOH HOH . 
F 4 HOH A 130 530 234 HOH HOH . 
F 4 HOH A 131 531 62 HOH HOH . 
F 4 HOH A 132 532 73 HOH HOH . 
F 4 HOH A 133 533 286 HOH HOH . 
F 4 HOH A 134 534 139 HOH HOH . 
F 4 HOH A 135 535 240 HOH HOH . 
F 4 HOH A 136 536 32 HOH HOH . 
F 4 HOH A 137 537 172 HOH HOH . 
F 4 HOH A 138 538 323 HOH HOH . 
F 4 HOH A 139 539 176 HOH HOH . 
F 4 HOH A 140 540 130 HOH HOH . 
F 4 HOH A 141 541 57 HOH HOH . 
F 4 HOH A 142 542 169 HOH HOH . 
F 4 HOH A 143 543 94 HOH HOH . 
F 4 HOH A 144 544 69 HOH HOH . 
F 4 HOH A 145 545 214 HOH HOH . 
F 4 HOH A 146 546 67 HOH HOH . 
F 4 HOH A 147 547 159 HOH HOH . 
F 4 HOH A 148 548 228 HOH HOH . 
F 4 HOH A 149 549 257 HOH HOH . 
F 4 HOH A 150 550 44 HOH HOH . 
F 4 HOH A 151 551 26 HOH HOH . 
F 4 HOH A 152 552 95 HOH HOH . 
F 4 HOH A 153 553 127 HOH HOH . 
F 4 HOH A 154 554 318 HOH HOH . 
F 4 HOH A 155 555 119 HOH HOH . 
F 4 HOH A 156 556 64 HOH HOH . 
F 4 HOH A 157 557 54 HOH HOH . 
F 4 HOH A 158 558 322 HOH HOH . 
F 4 HOH A 159 559 106 HOH HOH . 
F 4 HOH A 160 560 144 HOH HOH . 
F 4 HOH A 161 561 201 HOH HOH . 
F 4 HOH A 162 562 242 HOH HOH . 
F 4 HOH A 163 563 116 HOH HOH . 
F 4 HOH A 164 564 82 HOH HOH . 
F 4 HOH A 165 565 83 HOH HOH . 
F 4 HOH A 166 566 171 HOH HOH . 
F 4 HOH A 167 567 196 HOH HOH . 
F 4 HOH A 168 568 59 HOH HOH . 
F 4 HOH A 169 569 36 HOH HOH . 
F 4 HOH A 170 570 300 HOH HOH . 
F 4 HOH A 171 571 117 HOH HOH . 
F 4 HOH A 172 572 174 HOH HOH . 
F 4 HOH A 173 573 246 HOH HOH . 
F 4 HOH A 174 574 177 HOH HOH . 
F 4 HOH A 175 575 238 HOH HOH . 
F 4 HOH A 176 576 114 HOH HOH . 
F 4 HOH A 177 577 287 HOH HOH . 
F 4 HOH A 178 578 227 HOH HOH . 
F 4 HOH A 179 579 77 HOH HOH . 
F 4 HOH A 180 580 123 HOH HOH . 
F 4 HOH A 181 581 258 HOH HOH . 
F 4 HOH A 182 582 230 HOH HOH . 
F 4 HOH A 183 583 289 HOH HOH . 
F 4 HOH A 184 584 261 HOH HOH . 
F 4 HOH A 185 585 84 HOH HOH . 
F 4 HOH A 186 586 278 HOH HOH . 
F 4 HOH A 187 587 218 HOH HOH . 
F 4 HOH A 188 588 235 HOH HOH . 
F 4 HOH A 189 589 145 HOH HOH . 
F 4 HOH A 190 590 248 HOH HOH . 
F 4 HOH A 191 591 97 HOH HOH . 
F 4 HOH A 192 592 104 HOH HOH . 
F 4 HOH A 193 593 210 HOH HOH . 
F 4 HOH A 194 594 80 HOH HOH . 
F 4 HOH A 195 595 283 HOH HOH . 
F 4 HOH A 196 596 311 HOH HOH . 
F 4 HOH A 197 597 282 HOH HOH . 
F 4 HOH A 198 598 92 HOH HOH . 
F 4 HOH A 199 599 231 HOH HOH . 
F 4 HOH A 200 600 213 HOH HOH . 
F 4 HOH A 201 601 319 HOH HOH . 
F 4 HOH A 202 602 142 HOH HOH . 
F 4 HOH A 203 603 121 HOH HOH . 
F 4 HOH A 204 604 260 HOH HOH . 
F 4 HOH A 205 605 103 HOH HOH . 
F 4 HOH A 206 606 124 HOH HOH . 
F 4 HOH A 207 607 321 HOH HOH . 
F 4 HOH A 208 608 52 HOH HOH . 
F 4 HOH A 209 609 209 HOH HOH . 
F 4 HOH A 210 610 148 HOH HOH . 
F 4 HOH A 211 611 271 HOH HOH . 
F 4 HOH A 212 612 320 HOH HOH . 
F 4 HOH A 213 613 132 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 2 51.901 32.725 -6.305 1 84.62 ? C1 GOL 302 A 1 
HETATM 2 O O1 GOL . . . C 2 51.124 33.755 -5.746 1 78.24 ? O1 GOL 302 A 1 
HETATM 3 C C2 GOL . . . C 2 53.411 33.087 -6.067 1 79.53 ? C2 GOL 302 A 1 
HETATM 4 O O2 GOL . . . C 2 54.179 32.827 -7.191 1 93.17 ? O2 GOL 302 A 1 
HETATM 5 C C3 GOL . . . C 2 53.869 32.215 -4.856 1 67.56 ? C3 GOL 302 A 1 
HETATM 6 O O3 GOL . . . C 2 54.94 32.879 -4.199 1 56.45 ? O3 GOL 302 A 1 
HETATM 7 H H11 GOL . . . C 2 51.743 32.608 -7.255 1 101.55 ? H11 GOL 302 A 1 
HETATM 8 H H12 GOL . . . C 2 51.7 31.868 -5.898 1 101.55 ? H12 GOL 302 A 1 
HETATM 9 H HO1 GOL . . . C 2 50.318 33.594 -5.962 1 93.89 ? HO1 GOL 302 A 1 
HETATM 10 H H2 GOL . . . C 2 53.514 34.033 -5.88 1 95.44 ? H2 GOL 302 A 1 
HETATM 11 H HO2 GOL . . . C 2 54.923 33.227 -7.097 1 111.81 ? HO2 GOL 302 A 1 
HETATM 12 H H31 GOL . . . C 2 54.1 31.329 -5.175 1 81.07 ? H31 GOL 302 A 1 
HETATM 13 H H32 GOL . . . C 2 53.116 32.077 -4.26 1 81.07 ? H32 GOL 302 A 1 
HETATM 14 H HO3 GOL . . . C 2 55.196 32.367 -3.57 1 67.75 ? HO3 GOL 302 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           261 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           14 
#