data_6B92 # _model_server_result.job_id HqrE205jWBFiZvAsMKvi_A _model_server_result.datetime_utc '2024-11-15 09:50:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6b92 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6B92 # _exptl.entry_id 6B92 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6B92 _cell.length_a 190.351 _cell.length_b 190.351 _cell.length_c 190.351 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6B92 _symmetry.cell_setting ? _symmetry.Int_Tables_number 214 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 3 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6B92 _atom_sites.fract_transf_matrix[1][1] 0.005253 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005253 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005253 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 301 1 EDO EDO . C 2 EDO A 1 302 2 EDO EDO . D 2 EDO A 1 303 3 EDO EDO . E 2 EDO A 1 304 4 EDO EDO . F 3 SAH A 1 305 1 SAH SAH . G 4 HOH A 1 401 73 HOH HOH . G 4 HOH A 2 402 40 HOH HOH . G 4 HOH A 3 403 246 HOH HOH . G 4 HOH A 4 404 411 HOH HOH . G 4 HOH A 5 405 357 HOH HOH . G 4 HOH A 6 406 21 HOH HOH . G 4 HOH A 7 407 275 HOH HOH . G 4 HOH A 8 408 400 HOH HOH . G 4 HOH A 9 409 15 HOH HOH . G 4 HOH A 10 410 416 HOH HOH . G 4 HOH A 11 411 90 HOH HOH . G 4 HOH A 12 412 345 HOH HOH . G 4 HOH A 13 413 194 HOH HOH . G 4 HOH A 14 414 31 HOH HOH . G 4 HOH A 15 415 150 HOH HOH . G 4 HOH A 16 416 312 HOH HOH . G 4 HOH A 17 417 120 HOH HOH . G 4 HOH A 18 418 355 HOH HOH . G 4 HOH A 19 419 20 HOH HOH . G 4 HOH A 20 420 10 HOH HOH . G 4 HOH A 21 421 353 HOH HOH . G 4 HOH A 22 422 354 HOH HOH . G 4 HOH A 23 423 310 HOH HOH . G 4 HOH A 24 424 37 HOH HOH . G 4 HOH A 25 425 34 HOH HOH . G 4 HOH A 26 426 2 HOH HOH . G 4 HOH A 27 427 157 HOH HOH . G 4 HOH A 28 428 22 HOH HOH . G 4 HOH A 29 429 104 HOH HOH . G 4 HOH A 30 430 72 HOH HOH . G 4 HOH A 31 431 16 HOH HOH . G 4 HOH A 32 432 340 HOH HOH . G 4 HOH A 33 433 401 HOH HOH . G 4 HOH A 34 434 378 HOH HOH . G 4 HOH A 35 435 311 HOH HOH . G 4 HOH A 36 436 1 HOH HOH . G 4 HOH A 37 437 323 HOH HOH . G 4 HOH A 38 438 38 HOH HOH . G 4 HOH A 39 439 332 HOH HOH . G 4 HOH A 40 440 214 HOH HOH . G 4 HOH A 41 441 339 HOH HOH . G 4 HOH A 42 442 12 HOH HOH . G 4 HOH A 43 443 344 HOH HOH . G 4 HOH A 44 444 27 HOH HOH . G 4 HOH A 45 445 48 HOH HOH . G 4 HOH A 46 446 346 HOH HOH . G 4 HOH A 47 447 50 HOH HOH . G 4 HOH A 48 448 379 HOH HOH . G 4 HOH A 49 449 373 HOH HOH . G 4 HOH A 50 450 75 HOH HOH . G 4 HOH A 51 451 19 HOH HOH . G 4 HOH A 52 452 347 HOH HOH . G 4 HOH A 53 453 352 HOH HOH . G 4 HOH A 54 454 350 HOH HOH . G 4 HOH A 55 455 398 HOH HOH . G 4 HOH A 56 456 382 HOH HOH . G 4 HOH A 57 457 184 HOH HOH . G 4 HOH A 58 458 62 HOH HOH . G 4 HOH A 59 459 359 HOH HOH . G 4 HOH A 60 460 121 HOH HOH . G 4 HOH A 61 461 393 HOH HOH . G 4 HOH A 62 462 341 HOH HOH . G 4 HOH A 63 463 142 HOH HOH . G 4 HOH A 64 464 358 HOH HOH . G 4 HOH A 65 465 380 HOH HOH . G 4 HOH A 66 466 334 HOH HOH . G 4 HOH A 67 467 394 HOH HOH . G 4 HOH A 68 468 327 HOH HOH . G 4 HOH A 69 469 25 HOH HOH . G 4 HOH A 70 470 319 HOH HOH . G 4 HOH A 71 471 52 HOH HOH . G 4 HOH A 72 472 166 HOH HOH . G 4 HOH A 73 473 316 HOH HOH . G 4 HOH A 74 474 370 HOH HOH . G 4 HOH A 75 475 7 HOH HOH . G 4 HOH A 76 476 410 HOH HOH . G 4 HOH A 77 477 28 HOH HOH . G 4 HOH A 78 478 349 HOH HOH . G 4 HOH A 79 479 162 HOH HOH . G 4 HOH A 80 480 367 HOH HOH . G 4 HOH A 81 481 17 HOH HOH . G 4 HOH A 82 482 343 HOH HOH . G 4 HOH A 83 483 172 HOH HOH . G 4 HOH A 84 484 118 HOH HOH . G 4 HOH A 85 485 100 HOH HOH . G 4 HOH A 86 486 53 HOH HOH . G 4 HOH A 87 487 131 HOH HOH . G 4 HOH A 88 488 55 HOH HOH . G 4 HOH A 89 489 11 HOH HOH . G 4 HOH A 90 490 366 HOH HOH . G 4 HOH A 91 491 387 HOH HOH . G 4 HOH A 92 492 389 HOH HOH . G 4 HOH A 93 493 406 HOH HOH . G 4 HOH A 94 494 248 HOH HOH . G 4 HOH A 95 495 4 HOH HOH . G 4 HOH A 96 496 361 HOH HOH . G 4 HOH A 97 497 351 HOH HOH . G 4 HOH A 98 498 318 HOH HOH . G 4 HOH A 99 499 338 HOH HOH . G 4 HOH A 100 500 231 HOH HOH . G 4 HOH A 101 501 68 HOH HOH . G 4 HOH A 102 502 313 HOH HOH . G 4 HOH A 103 503 43 HOH HOH . G 4 HOH A 104 504 325 HOH HOH . G 4 HOH A 105 505 49 HOH HOH . G 4 HOH A 106 506 375 HOH HOH . G 4 HOH A 107 507 324 HOH HOH . G 4 HOH A 108 508 239 HOH HOH . G 4 HOH A 109 509 330 HOH HOH . G 4 HOH A 110 510 288 HOH HOH . G 4 HOH A 111 511 81 HOH HOH . G 4 HOH A 112 512 96 HOH HOH . G 4 HOH A 113 513 374 HOH HOH . G 4 HOH A 114 514 59 HOH HOH . G 4 HOH A 115 515 336 HOH HOH . G 4 HOH A 116 516 33 HOH HOH . G 4 HOH A 117 517 140 HOH HOH . G 4 HOH A 118 518 414 HOH HOH . G 4 HOH A 119 519 76 HOH HOH . G 4 HOH A 120 520 119 HOH HOH . G 4 HOH A 121 521 56 HOH HOH . G 4 HOH A 122 522 283 HOH HOH . G 4 HOH A 123 523 408 HOH HOH . G 4 HOH A 124 524 376 HOH HOH . G 4 HOH A 125 525 54 HOH HOH . G 4 HOH A 126 526 67 HOH HOH . G 4 HOH A 127 527 57 HOH HOH . G 4 HOH A 128 528 395 HOH HOH . G 4 HOH A 129 529 85 HOH HOH . G 4 HOH A 130 530 158 HOH HOH . G 4 HOH A 131 531 289 HOH HOH . G 4 HOH A 132 532 362 HOH HOH . G 4 HOH A 133 533 144 HOH HOH . G 4 HOH A 134 534 116 HOH HOH . G 4 HOH A 135 535 364 HOH HOH . G 4 HOH A 136 536 399 HOH HOH . G 4 HOH A 137 537 87 HOH HOH . G 4 HOH A 138 538 29 HOH HOH . G 4 HOH A 139 539 122 HOH HOH . G 4 HOH A 140 540 273 HOH HOH . G 4 HOH A 141 541 369 HOH HOH . G 4 HOH A 142 542 45 HOH HOH . G 4 HOH A 143 543 388 HOH HOH . G 4 HOH A 144 544 397 HOH HOH . G 4 HOH A 145 545 291 HOH HOH . G 4 HOH A 146 546 404 HOH HOH . G 4 HOH A 147 547 252 HOH HOH . G 4 HOH A 148 548 402 HOH HOH . G 4 HOH A 149 549 333 HOH HOH . G 4 HOH A 150 550 284 HOH HOH . G 4 HOH A 151 551 342 HOH HOH . G 4 HOH A 152 552 326 HOH HOH . G 4 HOH A 153 553 188 HOH HOH . G 4 HOH A 154 554 409 HOH HOH . G 4 HOH A 155 555 386 HOH HOH . G 4 HOH A 156 556 405 HOH HOH . G 4 HOH A 157 557 383 HOH HOH . G 4 HOH A 158 558 392 HOH HOH . G 4 HOH A 159 559 371 HOH HOH . G 4 HOH A 160 560 337 HOH HOH . G 4 HOH A 161 561 328 HOH HOH . G 4 HOH A 162 562 356 HOH HOH . G 4 HOH A 163 563 368 HOH HOH . G 4 HOH A 164 564 384 HOH HOH . G 4 HOH A 165 565 365 HOH HOH . G 4 HOH A 166 566 418 HOH HOH . G 4 HOH A 167 567 301 HOH HOH . G 4 HOH A 168 568 91 HOH HOH . G 4 HOH A 169 569 331 HOH HOH . G 4 HOH A 170 570 417 HOH HOH . G 4 HOH A 171 571 396 HOH HOH . G 4 HOH A 172 572 390 HOH HOH . G 4 HOH A 173 573 413 HOH HOH . G 4 HOH A 174 574 256 HOH HOH . G 4 HOH A 175 575 77 HOH HOH . G 4 HOH A 176 576 385 HOH HOH . G 4 HOH A 177 577 321 HOH HOH . G 4 HOH A 178 578 377 HOH HOH . G 4 HOH A 179 579 415 HOH HOH . G 4 HOH A 180 580 132 HOH HOH . G 4 HOH A 181 581 151 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 2 7.155 -0.033 45.648 1 98.45 ? C1 EDO 302 A 1 HETATM 2 O O1 EDO . . . C 2 5.988 0.583 46.206 1 100.92 ? O1 EDO 302 A 1 HETATM 3 C C2 EDO . . . C 2 7.326 -1.473 46.142 1 94.66 ? C2 EDO 302 A 1 HETATM 4 O O2 EDO . . . C 2 6.081 -2.185 46.075 1 87.43 ? O2 EDO 302 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 356 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #