data_6B94 # _model_server_result.job_id V8tY-i5meZPbWQhhrF86nQ _model_server_result.datetime_utc '2024-11-28 14:22:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6b94 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":203}' # _entry.id 6B94 # _exptl.entry_id 6B94 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6B94 _cell.length_a 43.23 _cell.length_b 58.32 _cell.length_c 111.5 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6B94 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,H,I,Q 1 1 B,D,J,K,L,M,N,O,P,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 N N N ? 3 O N N ? 3 P N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 GAL _pdbx_entity_branch_link.comp_id_2 FRU _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C FRU 1 C 1 FRU A 200 PDB 2 n C GAL 2 C 2 GAL A 200 PDB 2 n D FRU 1 D 1 FRU B 200 PDB 2 n D GAL 2 D 2 GAL B 200 PDB # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 16 A CYS 16 1_555 F S2 BME . A BME 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? covale ? covale2 A SG CYS 42 A CYS 42 1_555 E S2 BME . A BME 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? covale ? covale3 A SG CYS 60 A CYS 60 1_555 I S2 BME . A BME 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? covale ? covale4 A SG CYS 88 A CYS 88 1_555 G S2 BME . A BME 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? covale ? covale5 A SG CYS 130 A CYS 130 1_555 H S2 BME . A BME 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? covale ? covale6 B SG CYS 16 B CYS 16 1_555 N S2 BME . B BME 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? covale ? covale7 B SG CYS 42 B CYS 42 1_555 K S2 BME . B BME 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? covale ? covale8 B SG CYS 42 B CYS 42 1_555 L S2 BME . B BME 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? covale ? covale9 B SG CYS 60 B CYS 60 1_555 J S2 BME . B BME 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? covale ? covale10 B SG CYS 88 B CYS 88 1_555 O S2 BME . B BME 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? covale ? covale11 B SG CYS 130 B CYS 130 1_555 P S2 BME . B BME 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? covale ? covale12 C O4 FRU . C FRU 1 1_555 C C1 GAL . C GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.462 sing covale ? covale13 D O4 FRU . D FRU 1 1_555 D C1 GAL . D GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 sing # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6B94 _atom_sites.fract_transf_matrix[1][1] 0.023132 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017147 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008969 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 BME A 1 202 201 BME BME . F 3 BME A 1 203 202 BME BME . G 3 BME A 1 204 203 BME BME . H 3 BME A 1 205 204 BME BME . I 3 BME A 1 206 204 BME BME . J 3 BME B 1 202 201 BME BME . K 3 BME B 1 203 202 BME BME . L 3 BME B 1 204 203 BME BME . M 4 ACT B 1 205 205 ACT ACT . N 3 BME B 1 206 206 BME BME . O 3 BME B 1 207 207 BME BME . P 3 BME B 1 208 208 BME BME . Q 5 HOH A 1 301 124 HOH HOH . Q 5 HOH A 2 302 19 HOH HOH . Q 5 HOH A 3 303 72 HOH HOH . Q 5 HOH A 4 304 59 HOH HOH . Q 5 HOH A 5 305 18 HOH HOH . Q 5 HOH A 6 306 82 HOH HOH . Q 5 HOH A 7 307 2 HOH HOH . Q 5 HOH A 8 308 25 HOH HOH . Q 5 HOH A 9 309 126 HOH HOH . Q 5 HOH A 10 310 71 HOH HOH . Q 5 HOH A 11 311 73 HOH HOH . Q 5 HOH A 12 312 61 HOH HOH . Q 5 HOH A 13 313 122 HOH HOH . Q 5 HOH A 14 314 41 HOH HOH . Q 5 HOH A 15 315 74 HOH HOH . Q 5 HOH A 16 316 23 HOH HOH . Q 5 HOH A 17 317 125 HOH HOH . Q 5 HOH A 18 318 16 HOH HOH . Q 5 HOH A 19 319 57 HOH HOH . Q 5 HOH A 20 320 38 HOH HOH . Q 5 HOH A 21 321 45 HOH HOH . Q 5 HOH A 22 322 20 HOH HOH . Q 5 HOH A 23 323 22 HOH HOH . Q 5 HOH A 24 324 42 HOH HOH . Q 5 HOH A 25 325 106 HOH HOH . Q 5 HOH A 26 326 62 HOH HOH . Q 5 HOH A 27 327 14 HOH HOH . Q 5 HOH A 28 328 51 HOH HOH . Q 5 HOH A 29 329 84 HOH HOH . Q 5 HOH A 30 330 34 HOH HOH . Q 5 HOH A 31 331 26 HOH HOH . Q 5 HOH A 32 332 58 HOH HOH . Q 5 HOH A 33 333 80 HOH HOH . Q 5 HOH A 34 334 67 HOH HOH . Q 5 HOH A 35 335 7 HOH HOH . Q 5 HOH A 36 336 31 HOH HOH . Q 5 HOH A 37 337 21 HOH HOH . Q 5 HOH A 38 338 85 HOH HOH . Q 5 HOH A 39 339 123 HOH HOH . Q 5 HOH A 40 340 54 HOH HOH . Q 5 HOH A 41 341 117 HOH HOH . Q 5 HOH A 42 342 24 HOH HOH . Q 5 HOH A 43 343 97 HOH HOH . Q 5 HOH A 44 344 98 HOH HOH . Q 5 HOH A 45 345 28 HOH HOH . Q 5 HOH A 46 346 86 HOH HOH . Q 5 HOH A 47 347 37 HOH HOH . Q 5 HOH A 48 348 120 HOH HOH . Q 5 HOH A 49 349 96 HOH HOH . Q 5 HOH A 50 350 107 HOH HOH . Q 5 HOH A 51 351 127 HOH HOH . Q 5 HOH A 52 352 105 HOH HOH . Q 5 HOH A 53 353 114 HOH HOH . Q 5 HOH A 54 354 99 HOH HOH . R 5 HOH B 1 301 93 HOH HOH . R 5 HOH B 2 302 87 HOH HOH . R 5 HOH B 3 303 89 HOH HOH . R 5 HOH B 4 304 30 HOH HOH . R 5 HOH B 5 305 64 HOH HOH . R 5 HOH B 6 306 13 HOH HOH . R 5 HOH B 7 307 129 HOH HOH . R 5 HOH B 8 308 68 HOH HOH . R 5 HOH B 9 309 65 HOH HOH . R 5 HOH B 10 310 3 HOH HOH . R 5 HOH B 11 311 104 HOH HOH . R 5 HOH B 12 312 91 HOH HOH . R 5 HOH B 13 313 95 HOH HOH . R 5 HOH B 14 314 50 HOH HOH . R 5 HOH B 15 315 60 HOH HOH . R 5 HOH B 16 316 1 HOH HOH . R 5 HOH B 17 317 128 HOH HOH . R 5 HOH B 18 318 108 HOH HOH . R 5 HOH B 19 319 27 HOH HOH . R 5 HOH B 20 320 113 HOH HOH . R 5 HOH B 21 321 100 HOH HOH . R 5 HOH B 22 322 102 HOH HOH . R 5 HOH B 23 323 36 HOH HOH . R 5 HOH B 24 324 46 HOH HOH . R 5 HOH B 25 325 55 HOH HOH . R 5 HOH B 26 326 76 HOH HOH . R 5 HOH B 27 327 39 HOH HOH . R 5 HOH B 28 328 44 HOH HOH . R 5 HOH B 29 329 78 HOH HOH . R 5 HOH B 30 330 49 HOH HOH . R 5 HOH B 31 331 116 HOH HOH . R 5 HOH B 32 332 43 HOH HOH . R 5 HOH B 33 333 12 HOH HOH . R 5 HOH B 34 334 8 HOH HOH . R 5 HOH B 35 335 56 HOH HOH . R 5 HOH B 36 336 69 HOH HOH . R 5 HOH B 37 337 75 HOH HOH . R 5 HOH B 38 338 90 HOH HOH . R 5 HOH B 39 339 92 HOH HOH . R 5 HOH B 40 340 35 HOH HOH . R 5 HOH B 41 341 115 HOH HOH . R 5 HOH B 42 342 32 HOH HOH . R 5 HOH B 43 343 88 HOH HOH . R 5 HOH B 44 344 101 HOH HOH . R 5 HOH B 45 345 33 HOH HOH . R 5 HOH B 46 346 81 HOH HOH . R 5 HOH B 47 347 63 HOH HOH . R 5 HOH B 48 348 53 HOH HOH . R 5 HOH B 49 349 17 HOH HOH . R 5 HOH B 50 350 66 HOH HOH . R 5 HOH B 51 351 6 HOH HOH . R 5 HOH B 52 352 15 HOH HOH . R 5 HOH B 53 353 40 HOH HOH . R 5 HOH B 54 354 9 HOH HOH . R 5 HOH B 55 355 119 HOH HOH . R 5 HOH B 56 356 94 HOH HOH . R 5 HOH B 57 357 5 HOH HOH . R 5 HOH B 58 358 47 HOH HOH . R 5 HOH B 59 359 103 HOH HOH . R 5 HOH B 60 360 118 HOH HOH . R 5 HOH B 61 361 52 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . . . F 3 -0.884 9.799 8.263 1 32.15 ? C1 BME 203 A 1 HETATM 2 C C2 BME . . . F 3 -0.905 9.679 9.783 1 30.65 ? C2 BME 203 A 1 HETATM 3 O O1 BME . . . F 3 -1.994 9.095 7.698 1 35.63 ? O1 BME 203 A 1 HETATM 4 S S2 BME . . . F 3 0.609 10.419 10.459 1 28.13 ? S2 BME 203 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #