data_6B9G
#
_model_server_result.job_id            W4kZxGvoA9Whitz9V3tIKQ 
_model_server_result.datetime_utc      '2024-12-13 13:40:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6b9g 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":402}' 
#
_entry.id    6B9G 
#
_exptl.entry_id    6B9G 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6B9G 
_cell.length_a            308.032 
_cell.length_b            308.032 
_cell.length_c            308.032 
_cell.Z_PDB               192 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 6B9G 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        196 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'F 2 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,M 1 1 
B,G,H,N 2 1 
C,I,J,O 3 1 
D,K,L,P 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 J N N 
? 3 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD2 ASP 147 B ASP 146 1_555 F MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.575 ? 
metalc ? metalc2 B OD2 ASP 147 C ASP 146 1_555 H MG MG . C MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? 
metalc ? metalc3 C OG SER 82 D SER 81 1_555 J MG MG . D MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.973 ? 
metalc ? metalc4 I O3B GDP . D GDP 401 1_555 J MG MG . D MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.907 ? 
metalc ? metalc5 L MG MG . A MG 402 1_555 P O HOH . A HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.979 ? 
metalc ? metalc6 L MG MG . A MG 402 1_555 P O HOH . A HOH 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? 
metalc ? metalc7 L MG MG . A MG 402 1_555 P O HOH . A HOH 517 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.638 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6B9G 
_atom_sites.fract_transf_matrix[1][1]    0.003246 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.003246 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003246 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 GDP B 1 401 2 GDP GDP . 
F 3 MG B 1 402 2 MG MG . 
G 2 GDP C 1 401 3 GDP GDP . 
H 3 MG C 1 402 3 MG MG . 
I 2 GDP D 1 401 4 GDP GDP . 
J 3 MG D 1 402 15 MG MG . 
K 2 GDP A 1 401 1 GDP GDP . 
L 3 MG A 1 402 1 MG MG . 
M 4 HOH B 1 501 119 HOH HOH . 
M 4 HOH B 2 502 1 HOH HOH . 
M 4 HOH B 3 503 60 HOH HOH . 
M 4 HOH B 4 504 116 HOH HOH . 
M 4 HOH B 5 505 57 HOH HOH . 
M 4 HOH B 6 506 5 HOH HOH . 
M 4 HOH B 7 507 117 HOH HOH . 
M 4 HOH B 8 508 112 HOH HOH . 
M 4 HOH B 9 509 132 HOH HOH . 
M 4 HOH B 10 510 109 HOH HOH . 
M 4 HOH B 11 511 43 HOH HOH . 
M 4 HOH B 12 512 106 HOH HOH . 
M 4 HOH B 13 513 44 HOH HOH . 
M 4 HOH B 14 514 74 HOH HOH . 
M 4 HOH B 15 515 135 HOH HOH . 
M 4 HOH B 16 516 137 HOH HOH . 
M 4 HOH B 17 517 82 HOH HOH . 
M 4 HOH B 18 518 76 HOH HOH . 
M 4 HOH B 19 519 75 HOH HOH . 
M 4 HOH B 20 520 93 HOH HOH . 
M 4 HOH B 21 521 83 HOH HOH . 
M 4 HOH B 22 522 91 HOH HOH . 
M 4 HOH B 23 523 22 HOH HOH . 
M 4 HOH B 24 524 120 HOH HOH . 
M 4 HOH B 25 525 107 HOH HOH . 
M 4 HOH B 26 526 73 HOH HOH . 
M 4 HOH B 27 527 28 HOH HOH . 
M 4 HOH B 28 528 134 HOH HOH . 
M 4 HOH B 29 529 29 HOH HOH . 
M 4 HOH B 30 530 17 HOH HOH . 
M 4 HOH B 31 531 23 HOH HOH . 
M 4 HOH B 32 532 84 HOH HOH . 
M 4 HOH B 33 533 126 HOH HOH . 
M 4 HOH B 34 534 121 HOH HOH . 
N 4 HOH C 1 501 4 HOH HOH . 
N 4 HOH C 2 502 71 HOH HOH . 
N 4 HOH C 3 503 129 HOH HOH . 
N 4 HOH C 4 504 138 HOH HOH . 
N 4 HOH C 5 505 72 HOH HOH . 
N 4 HOH C 6 506 89 HOH HOH . 
N 4 HOH C 7 507 6 HOH HOH . 
N 4 HOH C 8 508 56 HOH HOH . 
N 4 HOH C 9 509 103 HOH HOH . 
N 4 HOH C 10 510 122 HOH HOH . 
N 4 HOH C 11 511 34 HOH HOH . 
N 4 HOH C 12 512 108 HOH HOH . 
N 4 HOH C 13 513 133 HOH HOH . 
N 4 HOH C 14 514 105 HOH HOH . 
N 4 HOH C 15 515 59 HOH HOH . 
N 4 HOH C 16 516 27 HOH HOH . 
N 4 HOH C 17 517 58 HOH HOH . 
N 4 HOH C 18 518 13 HOH HOH . 
N 4 HOH C 19 519 32 HOH HOH . 
N 4 HOH C 20 520 110 HOH HOH . 
N 4 HOH C 21 521 16 HOH HOH . 
N 4 HOH C 22 522 38 HOH HOH . 
N 4 HOH C 23 523 33 HOH HOH . 
N 4 HOH C 24 524 131 HOH HOH . 
N 4 HOH C 25 525 37 HOH HOH . 
N 4 HOH C 26 526 10 HOH HOH . 
N 4 HOH C 27 527 87 HOH HOH . 
N 4 HOH C 28 528 125 HOH HOH . 
N 4 HOH C 29 529 139 HOH HOH . 
N 4 HOH C 30 530 41 HOH HOH . 
O 4 HOH D 1 501 3 HOH HOH . 
O 4 HOH D 2 502 127 HOH HOH . 
O 4 HOH D 3 503 26 HOH HOH . 
O 4 HOH D 4 504 66 HOH HOH . 
O 4 HOH D 5 505 115 HOH HOH . 
O 4 HOH D 6 506 113 HOH HOH . 
O 4 HOH D 7 507 14 HOH HOH . 
O 4 HOH D 8 508 130 HOH HOH . 
O 4 HOH D 9 509 31 HOH HOH . 
O 4 HOH D 10 510 124 HOH HOH . 
O 4 HOH D 11 511 78 HOH HOH . 
P 4 HOH A 1 501 101 HOH HOH . 
P 4 HOH A 2 502 2 HOH HOH . 
P 4 HOH A 3 503 99 HOH HOH . 
P 4 HOH A 4 504 123 HOH HOH . 
P 4 HOH A 5 505 20 HOH HOH . 
P 4 HOH A 6 506 136 HOH HOH . 
P 4 HOH A 7 507 46 HOH HOH . 
P 4 HOH A 8 508 111 HOH HOH . 
P 4 HOH A 9 509 104 HOH HOH . 
P 4 HOH A 10 510 42 HOH HOH . 
P 4 HOH A 11 511 81 HOH HOH . 
P 4 HOH A 12 512 118 HOH HOH . 
P 4 HOH A 13 513 54 HOH HOH . 
P 4 HOH A 14 514 12 HOH HOH . 
P 4 HOH A 15 515 114 HOH HOH . 
P 4 HOH A 16 516 102 HOH HOH . 
P 4 HOH A 17 517 100 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         F 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               62.453 
_atom_site.Cartn_y               -16.355 
_atom_site.Cartn_z               -34.833 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        83.61 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           402 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              31 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    38 
_model_server_stats.query_time_ms           484 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#