data_6BB3
#
_model_server_result.job_id            ZLuouPvftkjgSV1tZ_w03w 
_model_server_result.datetime_utc      '2025-01-10 11:01:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6bb3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":401}' 
#
_entry.id    6BB3 
#
_exptl.entry_id    6BB3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              663.425 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          96.77 
_cell.angle_gamma         90 
_cell.entry_id            6BB3 
_cell.length_a            74.7 
_cell.length_b            80.798 
_cell.length_c            103.047 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6BB3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 I N N 
? 2 M N N 
? 2 Q N N 
#
_chem_comp.formula           'C21 H27 N7 O14 P2' 
_chem_comp.formula_weight    663.425 
_chem_comp.id                NAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAD doub 294 n n 
PA O2A NAD sing 295 n n 
PA O5B NAD sing 296 n n 
PA O3 NAD sing 297 n n 
O2A HOA2 NAD sing 298 n n 
O5B C5B NAD sing 299 n n 
C5B C4B NAD sing 300 n n 
C5B H51A NAD sing 301 n n 
C5B H52A NAD sing 302 n n 
C4B O4B NAD sing 303 n n 
C4B C3B NAD sing 304 n n 
C4B H4B NAD sing 305 n n 
O4B C1B NAD sing 306 n n 
C3B O3B NAD sing 307 n n 
C3B C2B NAD sing 308 n n 
C3B H3B NAD sing 309 n n 
O3B HO3A NAD sing 310 n n 
C2B O2B NAD sing 311 n n 
C2B C1B NAD sing 312 n n 
C2B H2B NAD sing 313 n n 
O2B HO2A NAD sing 314 n n 
C1B N9A NAD sing 315 n n 
C1B H1B NAD sing 316 n n 
N9A C8A NAD sing 317 n y 
N9A C4A NAD sing 318 n y 
C8A N7A NAD doub 319 n y 
C8A H8A NAD sing 320 n n 
N7A C5A NAD sing 321 n y 
C5A C6A NAD sing 322 n y 
C5A C4A NAD doub 323 n y 
C6A N6A NAD sing 324 n n 
C6A N1A NAD doub 325 n y 
N6A H61A NAD sing 326 n n 
N6A H62A NAD sing 327 n n 
N1A C2A NAD sing 328 n y 
C2A N3A NAD doub 329 n y 
C2A H2A NAD sing 330 n n 
N3A C4A NAD sing 331 n y 
O3 PN NAD sing 332 n n 
PN O1N NAD doub 333 n n 
PN O2N NAD sing 334 n n 
PN O5D NAD sing 335 n n 
O5D C5D NAD sing 336 n n 
C5D C4D NAD sing 337 n n 
C5D H51N NAD sing 338 n n 
C5D H52N NAD sing 339 n n 
C4D O4D NAD sing 340 n n 
C4D C3D NAD sing 341 n n 
C4D H4D NAD sing 342 n n 
O4D C1D NAD sing 343 n n 
C3D O3D NAD sing 344 n n 
C3D C2D NAD sing 345 n n 
C3D H3D NAD sing 346 n n 
O3D HO3N NAD sing 347 n n 
C2D O2D NAD sing 348 n n 
C2D C1D NAD sing 349 n n 
C2D H2D NAD sing 350 n n 
O2D HO2N NAD sing 351 n n 
C1D N1N NAD sing 352 n n 
C1D H1D NAD sing 353 n n 
N1N C2N NAD sing 354 n y 
N1N C6N NAD doub 355 n y 
C2N C3N NAD doub 356 n y 
C2N H2N NAD sing 357 n n 
C3N C7N NAD sing 358 n n 
C3N C4N NAD sing 359 n y 
C7N O7N NAD doub 360 n n 
C7N N7N NAD sing 361 n n 
N7N H71N NAD sing 362 n n 
N7N H72N NAD sing 363 n n 
C4N C5N NAD doub 364 n y 
C4N H4N NAD sing 365 n n 
C5N C6N NAD sing 366 n y 
C5N H5N NAD sing 367 n n 
C6N H6N NAD sing 368 n n 
#
_atom_sites.entry_id                     6BB3 
_atom_sites.fract_transf_matrix[1][1]    0.013387 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001589 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012377 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009772 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 NAD A 1 401 800 NAD NAI . 
F 3 SO4 A 1 402 4 SO4 SO4 . 
G 3 SO4 A 1 403 7 SO4 SO4 . 
H 4 D4A A 1 404 1 D4A DRG . 
I 2 NAD B 1 401 800 NAD NAI . 
J 3 SO4 B 1 402 1 SO4 SO4 . 
K 3 SO4 B 1 403 5 SO4 SO4 . 
L 4 D4A B 1 404 1 D4A DRG . 
M 2 NAD C 1 401 800 NAD NAI . 
N 3 SO4 C 1 402 3 SO4 SO4 . 
O 3 SO4 C 1 403 6 SO4 SO4 . 
P 4 D4A C 1 404 1 D4A DRG . 
Q 2 NAD D 1 401 800 NAD NAI . 
R 3 SO4 D 1 402 2 SO4 SO4 . 
S 4 D4A D 1 403 1 D4A DRG . 
T 5 HOH A 1 501 18 HOH HOH . 
T 5 HOH A 2 502 85 HOH HOH . 
T 5 HOH A 3 503 29 HOH HOH . 
T 5 HOH A 4 504 92 HOH HOH . 
T 5 HOH A 5 505 36 HOH HOH . 
T 5 HOH A 6 506 127 HOH HOH . 
T 5 HOH A 7 507 111 HOH HOH . 
T 5 HOH A 8 508 70 HOH HOH . 
T 5 HOH A 9 509 87 HOH HOH . 
T 5 HOH A 10 510 23 HOH HOH . 
T 5 HOH A 11 511 78 HOH HOH . 
T 5 HOH A 12 512 142 HOH HOH . 
T 5 HOH A 13 513 37 HOH HOH . 
T 5 HOH A 14 514 86 HOH HOH . 
T 5 HOH A 15 515 21 HOH HOH . 
T 5 HOH A 16 516 75 HOH HOH . 
T 5 HOH A 17 517 69 HOH HOH . 
T 5 HOH A 18 518 103 HOH HOH . 
T 5 HOH A 19 519 76 HOH HOH . 
T 5 HOH A 20 520 72 HOH HOH . 
T 5 HOH A 21 521 88 HOH HOH . 
T 5 HOH A 22 522 27 HOH HOH . 
T 5 HOH A 23 523 46 HOH HOH . 
T 5 HOH A 24 524 53 HOH HOH . 
T 5 HOH A 25 525 106 HOH HOH . 
T 5 HOH A 26 526 57 HOH HOH . 
T 5 HOH A 27 527 94 HOH HOH . 
T 5 HOH A 28 528 60 HOH HOH . 
T 5 HOH A 29 529 38 HOH HOH . 
T 5 HOH A 30 530 126 HOH HOH . 
U 5 HOH B 1 501 19 HOH HOH . 
U 5 HOH B 2 502 15 HOH HOH . 
U 5 HOH B 3 503 54 HOH HOH . 
U 5 HOH B 4 504 6 HOH HOH . 
U 5 HOH B 5 505 143 HOH HOH . 
U 5 HOH B 6 506 98 HOH HOH . 
U 5 HOH B 7 507 11 HOH HOH . 
U 5 HOH B 8 508 3 HOH HOH . 
U 5 HOH B 9 509 40 HOH HOH . 
U 5 HOH B 10 510 55 HOH HOH . 
U 5 HOH B 11 511 89 HOH HOH . 
U 5 HOH B 12 512 43 HOH HOH . 
U 5 HOH B 13 513 118 HOH HOH . 
U 5 HOH B 14 514 17 HOH HOH . 
U 5 HOH B 15 515 102 HOH HOH . 
U 5 HOH B 16 516 81 HOH HOH . 
U 5 HOH B 17 517 14 HOH HOH . 
U 5 HOH B 18 518 31 HOH HOH . 
U 5 HOH B 19 519 71 HOH HOH . 
U 5 HOH B 20 520 48 HOH HOH . 
U 5 HOH B 21 521 13 HOH HOH . 
U 5 HOH B 22 522 2 HOH HOH . 
U 5 HOH B 23 523 115 HOH HOH . 
U 5 HOH B 24 524 80 HOH HOH . 
U 5 HOH B 25 525 117 HOH HOH . 
U 5 HOH B 26 526 51 HOH HOH . 
U 5 HOH B 27 527 113 HOH HOH . 
U 5 HOH B 28 528 34 HOH HOH . 
U 5 HOH B 29 529 120 HOH HOH . 
U 5 HOH B 30 530 141 HOH HOH . 
U 5 HOH B 31 531 30 HOH HOH . 
U 5 HOH B 32 532 101 HOH HOH . 
U 5 HOH B 33 533 107 HOH HOH . 
U 5 HOH B 34 534 136 HOH HOH . 
V 5 HOH C 1 501 35 HOH HOH . 
V 5 HOH C 2 502 64 HOH HOH . 
V 5 HOH C 3 503 28 HOH HOH . 
V 5 HOH C 4 504 122 HOH HOH . 
V 5 HOH C 5 505 59 HOH HOH . 
V 5 HOH C 6 506 82 HOH HOH . 
V 5 HOH C 7 507 128 HOH HOH . 
V 5 HOH C 8 508 68 HOH HOH . 
V 5 HOH C 9 509 9 HOH HOH . 
V 5 HOH C 10 510 119 HOH HOH . 
V 5 HOH C 11 511 16 HOH HOH . 
V 5 HOH C 12 512 25 HOH HOH . 
V 5 HOH C 13 513 33 HOH HOH . 
V 5 HOH C 14 514 50 HOH HOH . 
V 5 HOH C 15 515 138 HOH HOH . 
V 5 HOH C 16 516 45 HOH HOH . 
V 5 HOH C 17 517 84 HOH HOH . 
V 5 HOH C 18 518 133 HOH HOH . 
V 5 HOH C 19 519 116 HOH HOH . 
V 5 HOH C 20 520 140 HOH HOH . 
V 5 HOH C 21 521 91 HOH HOH . 
V 5 HOH C 22 522 105 HOH HOH . 
V 5 HOH C 23 523 44 HOH HOH . 
V 5 HOH C 24 524 134 HOH HOH . 
V 5 HOH C 25 525 137 HOH HOH . 
V 5 HOH C 26 526 125 HOH HOH . 
V 5 HOH C 27 527 66 HOH HOH . 
V 5 HOH C 28 528 132 HOH HOH . 
W 5 HOH D 1 501 7 HOH HOH . 
W 5 HOH D 2 502 12 HOH HOH . 
W 5 HOH D 3 503 39 HOH HOH . 
W 5 HOH D 4 504 52 HOH HOH . 
W 5 HOH D 5 505 26 HOH HOH . 
W 5 HOH D 6 506 77 HOH HOH . 
W 5 HOH D 7 507 62 HOH HOH . 
W 5 HOH D 8 508 67 HOH HOH . 
W 5 HOH D 9 509 41 HOH HOH . 
W 5 HOH D 10 510 65 HOH HOH . 
W 5 HOH D 11 511 20 HOH HOH . 
W 5 HOH D 12 512 58 HOH HOH . 
W 5 HOH D 13 513 90 HOH HOH . 
W 5 HOH D 14 514 100 HOH HOH . 
W 5 HOH D 15 515 42 HOH HOH . 
W 5 HOH D 16 516 63 HOH HOH . 
W 5 HOH D 17 517 5 HOH HOH . 
W 5 HOH D 18 518 4 HOH HOH . 
W 5 HOH D 19 519 99 HOH HOH . 
W 5 HOH D 20 520 22 HOH HOH . 
W 5 HOH D 21 521 47 HOH HOH . 
W 5 HOH D 22 522 1 HOH HOH . 
W 5 HOH D 23 523 83 HOH HOH . 
W 5 HOH D 24 524 95 HOH HOH . 
W 5 HOH D 25 525 79 HOH HOH . 
W 5 HOH D 26 526 73 HOH HOH . 
W 5 HOH D 27 527 93 HOH HOH . 
W 5 HOH D 28 528 124 HOH HOH . 
W 5 HOH D 29 529 10 HOH HOH . 
W 5 HOH D 30 530 130 HOH HOH . 
W 5 HOH D 31 531 110 HOH HOH . 
W 5 HOH D 32 532 56 HOH HOH . 
W 5 HOH D 33 533 97 HOH HOH . 
W 5 HOH D 34 534 112 HOH HOH . 
W 5 HOH D 35 535 32 HOH HOH . 
W 5 HOH D 36 536 104 HOH HOH . 
W 5 HOH D 37 537 24 HOH HOH . 
W 5 HOH D 38 538 108 HOH HOH . 
W 5 HOH D 39 539 131 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAD . . . M 2 -8.268 -5.157 43.121 1 37.16 ? PA NAD 401 C 1 
HETATM 2 O O1A NAD . . . M 2 -8.396 -4.825 41.653 1 36.77 ? O1A NAD 401 C 1 
HETATM 3 O O2A NAD . . . M 2 -9.494 -5.434 43.955 1 38.97 ? O2A NAD 401 C 1 
HETATM 4 O O5B NAD . . . M 2 -7.176 -6.37 43.251 1 33.83 ? O5B NAD 401 C 1 
HETATM 5 C C5B NAD . . . M 2 -6.98 -6.992 44.512 1 33.61 ? C5B NAD 401 C 1 
HETATM 6 C C4B NAD . . . M 2 -6.64 -8.44 44.247 1 33.98 ? C4B NAD 401 C 1 
HETATM 7 O O4B NAD . . . M 2 -6.179 -9.052 45.447 1 34.89 ? O4B NAD 401 C 1 
HETATM 8 C C3B NAD . . . M 2 -7.864 -9.2 43.777 1 33.45 ? C3B NAD 401 C 1 
HETATM 9 O O3B NAD . . . M 2 -7.486 -9.878 42.592 1 34.17 ? O3B NAD 401 C 1 
HETATM 10 C C2B NAD . . . M 2 -8.122 -10.185 44.879 1 35.56 ? C2B NAD 401 C 1 
HETATM 11 O O2B NAD . . . M 2 -8.608 -11.433 44.418 1 35.99 ? O2B NAD 401 C 1 
HETATM 12 C C1B NAD . . . M 2 -6.754 -10.356 45.459 1 36.33 ? C1B NAD 401 C 1 
HETATM 13 N N9A NAD . . . M 2 -6.775 -10.959 46.776 1 38.24 ? N9A NAD 401 C 1 
HETATM 14 C C8A NAD . . . M 2 -7.697 -10.751 47.765 1 37.46 ? C8A NAD 401 C 1 
HETATM 15 N N7A NAD . . . M 2 -7.44 -11.502 48.818 1 37.55 ? N7A NAD 401 C 1 
HETATM 16 C C5A NAD . . . M 2 -6.319 -12.215 48.477 1 36.85 ? C5A NAD 401 C 1 
HETATM 17 C C6A NAD . . . M 2 -5.589 -13.149 49.175 1 37.2 ? C6A NAD 401 C 1 
HETATM 18 N N6A NAD . . . M 2 -5.993 -13.49 50.458 1 35.69 ? N6A NAD 401 C 1 
HETATM 19 N N1A NAD . . . M 2 -4.507 -13.689 48.58 1 39.66 ? N1A NAD 401 C 1 
HETATM 20 C C2A NAD . . . M 2 -4.19 -13.297 47.339 1 38.54 ? C2A NAD 401 C 1 
HETATM 21 N N3A NAD . . . M 2 -4.822 -12.397 46.575 1 39.43 ? N3A NAD 401 C 1 
HETATM 22 C C4A NAD . . . M 2 -5.888 -11.899 47.211 1 37.71 ? C4A NAD 401 C 1 
HETATM 23 O O3 NAD . . . M 2 -7.406 -3.98 43.839 1 34.2 ? O3 NAD 401 C 1 
HETATM 24 P PN NAD . . . M 2 -6.254 -3.108 43.109 1 30.6 ? PN NAD 401 C 1 
HETATM 25 O O1N NAD . . . M 2 -6.955 -1.948 42.455 1 29.46 ? O1N NAD 401 C 1 
HETATM 26 O O2N NAD . . . M 2 -5.35 -4.058 42.316 1 30.76 ? O2N NAD 401 C 1 
HETATM 27 O O5D NAD . . . M 2 -5.486 -2.525 44.424 1 33.1 ? O5D NAD 401 C 1 
HETATM 28 C C5D NAD . . . M 2 -4.673 -3.389 45.217 1 32.38 ? C5D NAD 401 C 1 
HETATM 29 C C4D NAD . . . M 2 -4.125 -2.62 46.408 1 33.44 ? C4D NAD 401 C 1 
HETATM 30 O O4D NAD . . . M 2 -3.078 -1.721 46.01 1 33.08 ? O4D NAD 401 C 1 
HETATM 31 C C3D NAD . . . M 2 -5.186 -1.812 47.131 1 35.22 ? C3D NAD 401 C 1 
HETATM 32 O O3D NAD . . . M 2 -4.984 -2.065 48.514 1 35.98 ? O3D NAD 401 C 1 
HETATM 33 C C2D NAD . . . M 2 -4.813 -0.377 46.814 1 37.31 ? C2D NAD 401 C 1 
HETATM 34 O O2D NAD . . . M 2 -5.176 0.512 47.863 1 39.31 ? O2D NAD 401 C 1 
HETATM 35 C C1D NAD . . . M 2 -3.306 -0.483 46.681 1 34.39 ? C1D NAD 401 C 1 
HETATM 36 N N1N NAD . . . M 2 -2.67 0.634 45.997 1 32.83 ? N1N NAD 401 C 1 
HETATM 37 C C2N NAD . . . M 2 -1.552 1.107 46.55 1 34.06 ? C2N NAD 401 C 1 
HETATM 38 C C3N NAD . . . M 2 -0.877 2.162 45.964 1 35.35 ? C3N NAD 401 C 1 
HETATM 39 C C7N NAD . . . M 2 0.357 2.696 46.579 1 35.98 ? C7N NAD 401 C 1 
HETATM 40 O O7N NAD . . . M 2 0.819 3.773 46.213 1 35.74 ? O7N NAD 401 C 1 
HETATM 41 N N7N NAD . . . M 2 0.909 1.885 47.543 1 33.97 ? N7N NAD 401 C 1 
HETATM 42 C C4N NAD . . . M 2 -1.36 2.726 44.796 1 33.62 ? C4N NAD 401 C 1 
HETATM 43 C C5N NAD . . . M 2 -2.515 2.204 44.249 1 33.6 ? C5N NAD 401 C 1 
HETATM 44 C C6N NAD . . . M 2 -3.16 1.148 44.865 1 33.63 ? C6N NAD 401 C 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           227 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           44 
#