data_6BDN
#
_model_server_result.job_id            xpopkoe8zvR8y-n4_TJVlA 
_model_server_result.datetime_utc      '2024-11-04 20:07:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6bdn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":401}' 
#
_entry.id    6BDN 
#
_exptl.entry_id    6BDN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.971 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHATE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6BDN 
_cell.length_a            55.187 
_cell.length_b            59.897 
_cell.length_c            110.177 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6BDN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A OG SER 181 A SER 177 1_555 B P PO4 . A PO4 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.574 ? 
metalc ? metalc1 A OD1 ASN 156 A ASN 152 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? 
metalc ? metalc2 A OD2 ASP 169 A ASP 165 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? 
metalc ? metalc3 D MG MG . A MG 403 1_555 E O1B ADP . A ADP 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? 
metalc ? metalc4 D MG MG . A MG 403 1_555 E O1A ADP . A ADP 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
metalc ? metalc5 D MG MG . A MG 403 1_555 F O HOH . A HOH 536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? 
metalc ? metalc6 D MG MG . A MG 403 1_555 F O HOH . A HOH 614 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? 
#
_chem_comp.formula           'O4 P -3' 
_chem_comp.formula_weight    94.971 
_chem_comp.id                PO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1 PO4 doub 304 n n 
P O2 PO4 sing 305 n n 
P O3 PO4 sing 306 n n 
P O4 PO4 sing 307 n n 
#
_atom_sites.entry_id                     6BDN 
_atom_sites.fract_transf_matrix[1][1]    0.01812 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016695 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009076 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 PO4 A 1 401 330 PO4 PO4 . 
C 3 SO4 A 1 402 331 SO4 SO4 . 
D 4 MG A 1 403 332 MG MG . 
E 5 ADP A 1 404 335 ADP ADP . 
F 6 HOH A 1 501 209 HOH HOH . 
F 6 HOH A 2 502 177 HOH HOH . 
F 6 HOH A 3 503 186 HOH HOH . 
F 6 HOH A 4 504 30 HOH HOH . 
F 6 HOH A 5 505 18 HOH HOH . 
F 6 HOH A 6 506 16 HOH HOH . 
F 6 HOH A 7 507 164 HOH HOH . 
F 6 HOH A 8 508 192 HOH HOH . 
F 6 HOH A 9 509 237 HOH HOH . 
F 6 HOH A 10 510 12 HOH HOH . 
F 6 HOH A 11 511 128 HOH HOH . 
F 6 HOH A 12 512 202 HOH HOH . 
F 6 HOH A 13 513 22 HOH HOH . 
F 6 HOH A 14 514 131 HOH HOH . 
F 6 HOH A 15 515 43 HOH HOH . 
F 6 HOH A 16 516 249 HOH HOH . 
F 6 HOH A 17 517 162 HOH HOH . 
F 6 HOH A 18 518 194 HOH HOH . 
F 6 HOH A 19 519 123 HOH HOH . 
F 6 HOH A 20 520 49 HOH HOH . 
F 6 HOH A 21 521 157 HOH HOH . 
F 6 HOH A 22 522 108 HOH HOH . 
F 6 HOH A 23 523 19 HOH HOH . 
F 6 HOH A 24 524 130 HOH HOH . 
F 6 HOH A 25 525 240 HOH HOH . 
F 6 HOH A 26 526 199 HOH HOH . 
F 6 HOH A 27 527 53 HOH HOH . 
F 6 HOH A 28 528 24 HOH HOH . 
F 6 HOH A 29 529 179 HOH HOH . 
F 6 HOH A 30 530 190 HOH HOH . 
F 6 HOH A 31 531 189 HOH HOH . 
F 6 HOH A 32 532 56 HOH HOH . 
F 6 HOH A 33 533 26 HOH HOH . 
F 6 HOH A 34 534 90 HOH HOH . 
F 6 HOH A 35 535 205 HOH HOH . 
F 6 HOH A 36 536 334 HOH HOH . 
F 6 HOH A 37 537 67 HOH HOH . 
F 6 HOH A 38 538 125 HOH HOH . 
F 6 HOH A 39 539 58 HOH HOH . 
F 6 HOH A 40 540 207 HOH HOH . 
F 6 HOH A 41 541 223 HOH HOH . 
F 6 HOH A 42 542 142 HOH HOH . 
F 6 HOH A 43 543 116 HOH HOH . 
F 6 HOH A 44 544 7 HOH HOH . 
F 6 HOH A 45 545 65 HOH HOH . 
F 6 HOH A 46 546 23 HOH HOH . 
F 6 HOH A 47 547 220 HOH HOH . 
F 6 HOH A 48 548 117 HOH HOH . 
F 6 HOH A 49 549 32 HOH HOH . 
F 6 HOH A 50 550 121 HOH HOH . 
F 6 HOH A 51 551 29 HOH HOH . 
F 6 HOH A 52 552 40 HOH HOH . 
F 6 HOH A 53 553 17 HOH HOH . 
F 6 HOH A 54 554 15 HOH HOH . 
F 6 HOH A 55 555 174 HOH HOH . 
F 6 HOH A 56 556 8 HOH HOH . 
F 6 HOH A 57 557 225 HOH HOH . 
F 6 HOH A 58 558 201 HOH HOH . 
F 6 HOH A 59 559 195 HOH HOH . 
F 6 HOH A 60 560 92 HOH HOH . 
F 6 HOH A 61 561 175 HOH HOH . 
F 6 HOH A 62 562 50 HOH HOH . 
F 6 HOH A 63 563 221 HOH HOH . 
F 6 HOH A 64 564 44 HOH HOH . 
F 6 HOH A 65 565 120 HOH HOH . 
F 6 HOH A 66 566 210 HOH HOH . 
F 6 HOH A 67 567 193 HOH HOH . 
F 6 HOH A 68 568 4 HOH HOH . 
F 6 HOH A 69 569 96 HOH HOH . 
F 6 HOH A 70 570 141 HOH HOH . 
F 6 HOH A 71 571 2 HOH HOH . 
F 6 HOH A 72 572 228 HOH HOH . 
F 6 HOH A 73 573 5 HOH HOH . 
F 6 HOH A 74 574 72 HOH HOH . 
F 6 HOH A 75 575 70 HOH HOH . 
F 6 HOH A 76 576 122 HOH HOH . 
F 6 HOH A 77 577 77 HOH HOH . 
F 6 HOH A 78 578 66 HOH HOH . 
F 6 HOH A 79 579 133 HOH HOH . 
F 6 HOH A 80 580 85 HOH HOH . 
F 6 HOH A 81 581 55 HOH HOH . 
F 6 HOH A 82 582 41 HOH HOH . 
F 6 HOH A 83 583 51 HOH HOH . 
F 6 HOH A 84 584 79 HOH HOH . 
F 6 HOH A 85 585 235 HOH HOH . 
F 6 HOH A 86 586 76 HOH HOH . 
F 6 HOH A 87 587 64 HOH HOH . 
F 6 HOH A 88 588 27 HOH HOH . 
F 6 HOH A 89 589 203 HOH HOH . 
F 6 HOH A 90 590 99 HOH HOH . 
F 6 HOH A 91 591 57 HOH HOH . 
F 6 HOH A 92 592 154 HOH HOH . 
F 6 HOH A 93 593 187 HOH HOH . 
F 6 HOH A 94 594 6 HOH HOH . 
F 6 HOH A 95 595 13 HOH HOH . 
F 6 HOH A 96 596 84 HOH HOH . 
F 6 HOH A 97 597 74 HOH HOH . 
F 6 HOH A 98 598 73 HOH HOH . 
F 6 HOH A 99 599 165 HOH HOH . 
F 6 HOH A 100 600 88 HOH HOH . 
F 6 HOH A 101 601 109 HOH HOH . 
F 6 HOH A 102 602 14 HOH HOH . 
F 6 HOH A 103 603 139 HOH HOH . 
F 6 HOH A 104 604 229 HOH HOH . 
F 6 HOH A 105 605 10 HOH HOH . 
F 6 HOH A 106 606 171 HOH HOH . 
F 6 HOH A 107 607 37 HOH HOH . 
F 6 HOH A 108 608 47 HOH HOH . 
F 6 HOH A 109 609 144 HOH HOH . 
F 6 HOH A 110 610 236 HOH HOH . 
F 6 HOH A 111 611 52 HOH HOH . 
F 6 HOH A 112 612 100 HOH HOH . 
F 6 HOH A 113 613 78 HOH HOH . 
F 6 HOH A 114 614 333 HOH HOH . 
F 6 HOH A 115 615 3 HOH HOH . 
F 6 HOH A 116 616 181 HOH HOH . 
F 6 HOH A 117 617 39 HOH HOH . 
F 6 HOH A 118 618 31 HOH HOH . 
F 6 HOH A 119 619 21 HOH HOH . 
F 6 HOH A 120 620 146 HOH HOH . 
F 6 HOH A 121 621 147 HOH HOH . 
F 6 HOH A 122 622 62 HOH HOH . 
F 6 HOH A 123 623 89 HOH HOH . 
F 6 HOH A 124 624 71 HOH HOH . 
F 6 HOH A 125 625 196 HOH HOH . 
F 6 HOH A 126 626 239 HOH HOH . 
F 6 HOH A 127 627 145 HOH HOH . 
F 6 HOH A 128 628 9 HOH HOH . 
F 6 HOH A 129 629 170 HOH HOH . 
F 6 HOH A 130 630 60 HOH HOH . 
F 6 HOH A 131 631 80 HOH HOH . 
F 6 HOH A 132 632 197 HOH HOH . 
F 6 HOH A 133 633 63 HOH HOH . 
F 6 HOH A 134 634 97 HOH HOH . 
F 6 HOH A 135 635 184 HOH HOH . 
F 6 HOH A 136 636 219 HOH HOH . 
F 6 HOH A 137 637 213 HOH HOH . 
F 6 HOH A 138 638 140 HOH HOH . 
F 6 HOH A 139 639 169 HOH HOH . 
F 6 HOH A 140 640 101 HOH HOH . 
F 6 HOH A 141 641 11 HOH HOH . 
F 6 HOH A 142 642 93 HOH HOH . 
F 6 HOH A 143 643 247 HOH HOH . 
F 6 HOH A 144 644 110 HOH HOH . 
F 6 HOH A 145 645 91 HOH HOH . 
F 6 HOH A 146 646 45 HOH HOH . 
F 6 HOH A 147 647 241 HOH HOH . 
F 6 HOH A 148 648 75 HOH HOH . 
F 6 HOH A 149 649 127 HOH HOH . 
F 6 HOH A 150 650 119 HOH HOH . 
F 6 HOH A 151 651 20 HOH HOH . 
F 6 HOH A 152 652 226 HOH HOH . 
F 6 HOH A 153 653 234 HOH HOH . 
F 6 HOH A 154 654 218 HOH HOH . 
F 6 HOH A 155 655 188 HOH HOH . 
F 6 HOH A 156 656 94 HOH HOH . 
F 6 HOH A 157 657 25 HOH HOH . 
F 6 HOH A 158 658 46 HOH HOH . 
F 6 HOH A 159 659 180 HOH HOH . 
F 6 HOH A 160 660 208 HOH HOH . 
F 6 HOH A 161 661 95 HOH HOH . 
F 6 HOH A 162 662 129 HOH HOH . 
F 6 HOH A 163 663 118 HOH HOH . 
F 6 HOH A 164 664 87 HOH HOH . 
F 6 HOH A 165 665 227 HOH HOH . 
F 6 HOH A 166 666 224 HOH HOH . 
F 6 HOH A 167 667 59 HOH HOH . 
F 6 HOH A 168 668 238 HOH HOH . 
F 6 HOH A 169 669 212 HOH HOH . 
F 6 HOH A 170 670 182 HOH HOH . 
F 6 HOH A 171 671 105 HOH HOH . 
F 6 HOH A 172 672 245 HOH HOH . 
F 6 HOH A 173 673 232 HOH HOH . 
F 6 HOH A 174 674 69 HOH HOH . 
F 6 HOH A 175 675 215 HOH HOH . 
F 6 HOH A 176 676 132 HOH HOH . 
F 6 HOH A 177 677 36 HOH HOH . 
F 6 HOH A 178 678 148 HOH HOH . 
F 6 HOH A 179 679 61 HOH HOH . 
F 6 HOH A 180 680 68 HOH HOH . 
F 6 HOH A 181 681 1 HOH HOH . 
F 6 HOH A 182 682 152 HOH HOH . 
F 6 HOH A 183 683 185 HOH HOH . 
F 6 HOH A 184 684 222 HOH HOH . 
F 6 HOH A 185 685 191 HOH HOH . 
F 6 HOH A 186 686 178 HOH HOH . 
F 6 HOH A 187 687 137 HOH HOH . 
F 6 HOH A 188 688 176 HOH HOH . 
F 6 HOH A 189 689 163 HOH HOH . 
F 6 HOH A 190 690 217 HOH HOH . 
F 6 HOH A 191 691 198 HOH HOH . 
F 6 HOH A 192 692 54 HOH HOH . 
F 6 HOH A 193 693 183 HOH HOH . 
F 6 HOH A 194 694 107 HOH HOH . 
F 6 HOH A 195 695 113 HOH HOH . 
F 6 HOH A 196 696 98 HOH HOH . 
F 6 HOH A 197 697 114 HOH HOH . 
F 6 HOH A 198 698 216 HOH HOH . 
F 6 HOH A 199 699 134 HOH HOH . 
F 6 HOH A 200 700 200 HOH HOH . 
F 6 HOH A 201 701 156 HOH HOH . 
F 6 HOH A 202 702 82 HOH HOH . 
F 6 HOH A 203 703 38 HOH HOH . 
F 6 HOH A 204 704 160 HOH HOH . 
F 6 HOH A 205 705 168 HOH HOH . 
F 6 HOH A 206 706 211 HOH HOH . 
F 6 HOH A 207 707 104 HOH HOH . 
F 6 HOH A 208 708 246 HOH HOH . 
F 6 HOH A 209 709 35 HOH HOH . 
F 6 HOH A 210 710 150 HOH HOH . 
F 6 HOH A 211 711 214 HOH HOH . 
F 6 HOH A 212 712 111 HOH HOH . 
F 6 HOH A 213 713 83 HOH HOH . 
F 6 HOH A 214 714 86 HOH HOH . 
F 6 HOH A 215 715 231 HOH HOH . 
F 6 HOH A 216 716 149 HOH HOH . 
F 6 HOH A 217 717 173 HOH HOH . 
F 6 HOH A 218 718 230 HOH HOH . 
F 6 HOH A 219 719 155 HOH HOH . 
F 6 HOH A 220 720 135 HOH HOH . 
F 6 HOH A 221 721 166 HOH HOH . 
F 6 HOH A 222 722 243 HOH HOH . 
F 6 HOH A 223 723 42 HOH HOH . 
F 6 HOH A 224 724 124 HOH HOH . 
F 6 HOH A 225 725 138 HOH HOH . 
F 6 HOH A 226 726 136 HOH HOH . 
F 6 HOH A 227 727 159 HOH HOH . 
F 6 HOH A 228 728 115 HOH HOH . 
F 6 HOH A 229 729 126 HOH HOH . 
F 6 HOH A 230 730 34 HOH HOH . 
F 6 HOH A 231 731 151 HOH HOH . 
F 6 HOH A 232 732 158 HOH HOH . 
F 6 HOH A 233 733 172 HOH HOH . 
F 6 HOH A 234 734 204 HOH HOH . 
F 6 HOH A 235 735 112 HOH HOH . 
F 6 HOH A 236 736 167 HOH HOH . 
F 6 HOH A 237 737 244 HOH HOH . 
F 6 HOH A 238 738 242 HOH HOH . 
F 6 HOH A 239 739 153 HOH HOH . 
F 6 HOH A 240 740 33 HOH HOH . 
F 6 HOH A 241 741 161 HOH HOH . 
F 6 HOH A 242 742 106 HOH HOH . 
F 6 HOH A 243 743 81 HOH HOH . 
F 6 HOH A 244 744 248 HOH HOH . 
F 6 HOH A 245 745 102 HOH HOH . 
F 6 HOH A 246 746 143 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P PO4 . . . B 2 76.097 18.299 139.789 1 22.22 ? P PO4 401 A 1 
HETATM 2 O O2 PO4 . . . B 2 75.436 19.559 139.997 1 20.34 ? O2 PO4 401 A 1 
HETATM 3 O O3 PO4 . . . B 2 75.454 17.296 138.89 1 22.88 ? O3 PO4 401 A 1 
HETATM 4 O O4 PO4 . . . B 2 76.629 17.564 141.029 1 24.09 ? O4 PO4 401 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           285 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           4 
#