data_6BEC # _model_server_result.job_id siyYIQV_LOT5_LI-0UDOmQ _model_server_result.datetime_utc '2024-11-23 22:48:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6bec # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":603}' # _entry.id 6BEC # _exptl.entry_id 6BEC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6BEC _cell.length_a 188.62 _cell.length_b 188.62 _cell.length_c 261.55 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BEC _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 H N N ? 2 I N N ? 2 L N N ? 2 M N N ? 2 N N N # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 92 n n C O2 FMT sing 93 n n C H FMT sing 94 n n O2 HO2 FMT sing 95 n n # _atom_sites.entry_id 6BEC _atom_sites.fract_transf_matrix[1][1] 0.005302 _atom_sites.fract_transf_matrix[1][2] 0.003061 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006122 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003823 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 FMT A 1 601 6 FMT FMT . E 3 EDO A 1 602 2 EDO EDO . F 3 EDO A 1 603 6 EDO EDO . G 3 EDO A 1 604 8 EDO EDO . H 2 FMT B 1 601 3 FMT FMT . I 2 FMT B 1 602 7 FMT FMT . J 3 EDO B 1 603 3 EDO EDO . K 4 RBT C 1 601 1 RBT RBT . L 2 FMT C 1 602 1 FMT FMT . M 2 FMT C 1 603 2 FMT FMT . N 2 FMT C 1 604 8 FMT FMT . O 3 EDO C 1 605 1 EDO EDO . P 3 EDO C 1 606 4 EDO EDO . Q 3 EDO C 1 607 7 EDO EDO . R 5 HOH A 1 701 325 HOH HOH . R 5 HOH A 2 702 358 HOH HOH . R 5 HOH A 3 703 389 HOH HOH . R 5 HOH A 4 704 261 HOH HOH . R 5 HOH A 5 705 251 HOH HOH . R 5 HOH A 6 706 56 HOH HOH . R 5 HOH A 7 707 36 HOH HOH . R 5 HOH A 8 708 402 HOH HOH . R 5 HOH A 9 709 250 HOH HOH . R 5 HOH A 10 710 30 HOH HOH . R 5 HOH A 11 711 277 HOH HOH . R 5 HOH A 12 712 249 HOH HOH . R 5 HOH A 13 713 283 HOH HOH . R 5 HOH A 14 714 51 HOH HOH . R 5 HOH A 15 715 129 HOH HOH . R 5 HOH A 16 716 66 HOH HOH . R 5 HOH A 17 717 3 HOH HOH . R 5 HOH A 18 718 73 HOH HOH . R 5 HOH A 19 719 284 HOH HOH . R 5 HOH A 20 720 112 HOH HOH . R 5 HOH A 21 721 203 HOH HOH . R 5 HOH A 22 722 219 HOH HOH . R 5 HOH A 23 723 62 HOH HOH . R 5 HOH A 24 724 288 HOH HOH . R 5 HOH A 25 725 246 HOH HOH . R 5 HOH A 26 726 394 HOH HOH . R 5 HOH A 27 727 72 HOH HOH . R 5 HOH A 28 728 296 HOH HOH . R 5 HOH A 29 729 278 HOH HOH . R 5 HOH A 30 730 81 HOH HOH . R 5 HOH A 31 731 32 HOH HOH . R 5 HOH A 32 732 163 HOH HOH . R 5 HOH A 33 733 154 HOH HOH . R 5 HOH A 34 734 150 HOH HOH . R 5 HOH A 35 735 362 HOH HOH . R 5 HOH A 36 736 65 HOH HOH . R 5 HOH A 37 737 121 HOH HOH . R 5 HOH A 38 738 266 HOH HOH . R 5 HOH A 39 739 218 HOH HOH . R 5 HOH A 40 740 395 HOH HOH . R 5 HOH A 41 741 23 HOH HOH . R 5 HOH A 42 742 173 HOH HOH . R 5 HOH A 43 743 124 HOH HOH . R 5 HOH A 44 744 243 HOH HOH . R 5 HOH A 45 745 153 HOH HOH . R 5 HOH A 46 746 226 HOH HOH . R 5 HOH A 47 747 59 HOH HOH . R 5 HOH A 48 748 221 HOH HOH . R 5 HOH A 49 749 180 HOH HOH . R 5 HOH A 50 750 11 HOH HOH . R 5 HOH A 51 751 137 HOH HOH . R 5 HOH A 52 752 145 HOH HOH . R 5 HOH A 53 753 118 HOH HOH . R 5 HOH A 54 754 253 HOH HOH . R 5 HOH A 55 755 379 HOH HOH . R 5 HOH A 56 756 171 HOH HOH . R 5 HOH A 57 757 156 HOH HOH . R 5 HOH A 58 758 85 HOH HOH . R 5 HOH A 59 759 132 HOH HOH . R 5 HOH A 60 760 183 HOH HOH . R 5 HOH A 61 761 61 HOH HOH . R 5 HOH A 62 762 191 HOH HOH . R 5 HOH A 63 763 126 HOH HOH . R 5 HOH A 64 764 187 HOH HOH . R 5 HOH A 65 765 312 HOH HOH . R 5 HOH A 66 766 53 HOH HOH . R 5 HOH A 67 767 195 HOH HOH . R 5 HOH A 68 768 100 HOH HOH . R 5 HOH A 69 769 206 HOH HOH . R 5 HOH A 70 770 102 HOH HOH . R 5 HOH A 71 771 194 HOH HOH . R 5 HOH A 72 772 86 HOH HOH . R 5 HOH A 73 773 44 HOH HOH . R 5 HOH A 74 774 228 HOH HOH . R 5 HOH A 75 775 353 HOH HOH . R 5 HOH A 76 776 117 HOH HOH . R 5 HOH A 77 777 290 HOH HOH . R 5 HOH A 78 778 350 HOH HOH . R 5 HOH A 79 779 289 HOH HOH . R 5 HOH A 80 780 18 HOH HOH . R 5 HOH A 81 781 146 HOH HOH . R 5 HOH A 82 782 50 HOH HOH . R 5 HOH A 83 783 315 HOH HOH . R 5 HOH A 84 784 39 HOH HOH . R 5 HOH A 85 785 354 HOH HOH . R 5 HOH A 86 786 7 HOH HOH . R 5 HOH A 87 787 329 HOH HOH . R 5 HOH A 88 788 328 HOH HOH . R 5 HOH A 89 789 33 HOH HOH . R 5 HOH A 90 790 198 HOH HOH . R 5 HOH A 91 791 304 HOH HOH . R 5 HOH A 92 792 230 HOH HOH . R 5 HOH A 93 793 133 HOH HOH . R 5 HOH A 94 794 302 HOH HOH . R 5 HOH A 95 795 337 HOH HOH . R 5 HOH A 96 796 351 HOH HOH . R 5 HOH A 97 797 300 HOH HOH . R 5 HOH A 98 798 356 HOH HOH . R 5 HOH A 99 799 5 HOH HOH . R 5 HOH A 100 800 190 HOH HOH . R 5 HOH A 101 801 4 HOH HOH . R 5 HOH A 102 802 162 HOH HOH . R 5 HOH A 103 803 335 HOH HOH . R 5 HOH A 104 804 233 HOH HOH . R 5 HOH A 105 805 105 HOH HOH . R 5 HOH A 106 806 215 HOH HOH . R 5 HOH A 107 807 342 HOH HOH . R 5 HOH A 108 808 316 HOH HOH . R 5 HOH A 109 809 314 HOH HOH . R 5 HOH A 110 810 346 HOH HOH . R 5 HOH A 111 811 334 HOH HOH . R 5 HOH A 112 812 71 HOH HOH . S 5 HOH B 1 701 380 HOH HOH . S 5 HOH B 2 702 260 HOH HOH . S 5 HOH B 3 703 257 HOH HOH . S 5 HOH B 4 704 405 HOH HOH . S 5 HOH B 5 705 400 HOH HOH . S 5 HOH B 6 706 338 HOH HOH . S 5 HOH B 7 707 91 HOH HOH . S 5 HOH B 8 708 57 HOH HOH . S 5 HOH B 9 709 376 HOH HOH . S 5 HOH B 10 710 207 HOH HOH . S 5 HOH B 11 711 327 HOH HOH . S 5 HOH B 12 712 94 HOH HOH . S 5 HOH B 13 713 396 HOH HOH . S 5 HOH B 14 714 116 HOH HOH . S 5 HOH B 15 715 130 HOH HOH . S 5 HOH B 16 716 68 HOH HOH . S 5 HOH B 17 717 407 HOH HOH . S 5 HOH B 18 718 151 HOH HOH . S 5 HOH B 19 719 88 HOH HOH . S 5 HOH B 20 720 27 HOH HOH . S 5 HOH B 21 721 157 HOH HOH . S 5 HOH B 22 722 142 HOH HOH . S 5 HOH B 23 723 60 HOH HOH . S 5 HOH B 24 724 95 HOH HOH . S 5 HOH B 25 725 106 HOH HOH . S 5 HOH B 26 726 404 HOH HOH . S 5 HOH B 27 727 82 HOH HOH . S 5 HOH B 28 728 161 HOH HOH . S 5 HOH B 29 729 17 HOH HOH . S 5 HOH B 30 730 225 HOH HOH . S 5 HOH B 31 731 64 HOH HOH . S 5 HOH B 32 732 378 HOH HOH . S 5 HOH B 33 733 87 HOH HOH . S 5 HOH B 34 734 333 HOH HOH . S 5 HOH B 35 735 202 HOH HOH . S 5 HOH B 36 736 330 HOH HOH . S 5 HOH B 37 737 370 HOH HOH . S 5 HOH B 38 738 193 HOH HOH . S 5 HOH B 39 739 84 HOH HOH . S 5 HOH B 40 740 93 HOH HOH . S 5 HOH B 41 741 294 HOH HOH . S 5 HOH B 42 742 38 HOH HOH . S 5 HOH B 43 743 89 HOH HOH . S 5 HOH B 44 744 255 HOH HOH . S 5 HOH B 45 745 47 HOH HOH . S 5 HOH B 46 746 90 HOH HOH . S 5 HOH B 47 747 224 HOH HOH . S 5 HOH B 48 748 276 HOH HOH . S 5 HOH B 49 749 77 HOH HOH . S 5 HOH B 50 750 306 HOH HOH . S 5 HOH B 51 751 234 HOH HOH . S 5 HOH B 52 752 201 HOH HOH . S 5 HOH B 53 753 235 HOH HOH . S 5 HOH B 54 754 377 HOH HOH . S 5 HOH B 55 755 114 HOH HOH . S 5 HOH B 56 756 113 HOH HOH . S 5 HOH B 57 757 79 HOH HOH . S 5 HOH B 58 758 42 HOH HOH . S 5 HOH B 59 759 403 HOH HOH . S 5 HOH B 60 760 254 HOH HOH . S 5 HOH B 61 761 274 HOH HOH . S 5 HOH B 62 762 139 HOH HOH . S 5 HOH B 63 763 169 HOH HOH . S 5 HOH B 64 764 74 HOH HOH . S 5 HOH B 65 765 341 HOH HOH . S 5 HOH B 66 766 120 HOH HOH . S 5 HOH B 67 767 31 HOH HOH . S 5 HOH B 68 768 20 HOH HOH . S 5 HOH B 69 769 158 HOH HOH . S 5 HOH B 70 770 48 HOH HOH . S 5 HOH B 71 771 339 HOH HOH . S 5 HOH B 72 772 6 HOH HOH . S 5 HOH B 73 773 78 HOH HOH . S 5 HOH B 74 774 355 HOH HOH . S 5 HOH B 75 775 309 HOH HOH . S 5 HOH B 76 776 109 HOH HOH . S 5 HOH B 77 777 229 HOH HOH . S 5 HOH B 78 778 256 HOH HOH . S 5 HOH B 79 779 29 HOH HOH . S 5 HOH B 80 780 303 HOH HOH . S 5 HOH B 81 781 127 HOH HOH . S 5 HOH B 82 782 10 HOH HOH . S 5 HOH B 83 783 273 HOH HOH . S 5 HOH B 84 784 391 HOH HOH . S 5 HOH B 85 785 397 HOH HOH . S 5 HOH B 86 786 76 HOH HOH . S 5 HOH B 87 787 223 HOH HOH . S 5 HOH B 88 788 58 HOH HOH . T 5 HOH C 1 701 259 HOH HOH . T 5 HOH C 2 702 54 HOH HOH . T 5 HOH C 3 703 210 HOH HOH . T 5 HOH C 4 704 258 HOH HOH . T 5 HOH C 5 705 108 HOH HOH . T 5 HOH C 6 706 122 HOH HOH . T 5 HOH C 7 707 297 HOH HOH . T 5 HOH C 8 708 271 HOH HOH . T 5 HOH C 9 709 263 HOH HOH . T 5 HOH C 10 710 326 HOH HOH . T 5 HOH C 11 711 101 HOH HOH . T 5 HOH C 12 712 267 HOH HOH . T 5 HOH C 13 713 222 HOH HOH . T 5 HOH C 14 714 24 HOH HOH . T 5 HOH C 15 715 348 HOH HOH . T 5 HOH C 16 716 401 HOH HOH . T 5 HOH C 17 717 63 HOH HOH . T 5 HOH C 18 718 332 HOH HOH . T 5 HOH C 19 719 291 HOH HOH . T 5 HOH C 20 720 110 HOH HOH . T 5 HOH C 21 721 357 HOH HOH . T 5 HOH C 22 722 98 HOH HOH . T 5 HOH C 23 723 97 HOH HOH . T 5 HOH C 24 724 1 HOH HOH . T 5 HOH C 25 725 200 HOH HOH . T 5 HOH C 26 726 282 HOH HOH . T 5 HOH C 27 727 399 HOH HOH . T 5 HOH C 28 728 372 HOH HOH . T 5 HOH C 29 729 104 HOH HOH . T 5 HOH C 30 730 138 HOH HOH . T 5 HOH C 31 731 46 HOH HOH . T 5 HOH C 32 732 406 HOH HOH . T 5 HOH C 33 733 174 HOH HOH . T 5 HOH C 34 734 141 HOH HOH . T 5 HOH C 35 735 262 HOH HOH . T 5 HOH C 36 736 308 HOH HOH . T 5 HOH C 37 737 189 HOH HOH . T 5 HOH C 38 738 363 HOH HOH . T 5 HOH C 39 739 149 HOH HOH . T 5 HOH C 40 740 16 HOH HOH . T 5 HOH C 41 741 264 HOH HOH . T 5 HOH C 42 742 70 HOH HOH . T 5 HOH C 43 743 140 HOH HOH . T 5 HOH C 44 744 238 HOH HOH . T 5 HOH C 45 745 209 HOH HOH . T 5 HOH C 46 746 213 HOH HOH . T 5 HOH C 47 747 103 HOH HOH . T 5 HOH C 48 748 318 HOH HOH . T 5 HOH C 49 749 239 HOH HOH . T 5 HOH C 50 750 119 HOH HOH . T 5 HOH C 51 751 197 HOH HOH . T 5 HOH C 52 752 241 HOH HOH . T 5 HOH C 53 753 13 HOH HOH . T 5 HOH C 54 754 26 HOH HOH . T 5 HOH C 55 755 324 HOH HOH . T 5 HOH C 56 756 242 HOH HOH . T 5 HOH C 57 757 172 HOH HOH . T 5 HOH C 58 758 252 HOH HOH . T 5 HOH C 59 759 2 HOH HOH . T 5 HOH C 60 760 41 HOH HOH . T 5 HOH C 61 761 307 HOH HOH . T 5 HOH C 62 762 245 HOH HOH . T 5 HOH C 63 763 371 HOH HOH . T 5 HOH C 64 764 52 HOH HOH . T 5 HOH C 65 765 231 HOH HOH . T 5 HOH C 66 766 310 HOH HOH . T 5 HOH C 67 767 55 HOH HOH . T 5 HOH C 68 768 244 HOH HOH . T 5 HOH C 69 769 67 HOH HOH . T 5 HOH C 70 770 123 HOH HOH . T 5 HOH C 71 771 22 HOH HOH . T 5 HOH C 72 772 128 HOH HOH . T 5 HOH C 73 773 159 HOH HOH . T 5 HOH C 74 774 340 HOH HOH . T 5 HOH C 75 775 240 HOH HOH . T 5 HOH C 76 776 15 HOH HOH . T 5 HOH C 77 777 8 HOH HOH . T 5 HOH C 78 778 345 HOH HOH . T 5 HOH C 79 779 216 HOH HOH . T 5 HOH C 80 780 305 HOH HOH . T 5 HOH C 81 781 12 HOH HOH . T 5 HOH C 82 782 236 HOH HOH . T 5 HOH C 83 783 40 HOH HOH . T 5 HOH C 84 784 166 HOH HOH . T 5 HOH C 85 785 168 HOH HOH . T 5 HOH C 86 786 268 HOH HOH . T 5 HOH C 87 787 184 HOH HOH . T 5 HOH C 88 788 176 HOH HOH . T 5 HOH C 89 789 208 HOH HOH . T 5 HOH C 90 790 320 HOH HOH . T 5 HOH C 91 791 343 HOH HOH . T 5 HOH C 92 792 349 HOH HOH . T 5 HOH C 93 793 34 HOH HOH . T 5 HOH C 94 794 352 HOH HOH . T 5 HOH C 95 795 392 HOH HOH . T 5 HOH C 96 796 214 HOH HOH . T 5 HOH C 97 797 344 HOH HOH . T 5 HOH C 98 798 386 HOH HOH . T 5 HOH C 99 799 347 HOH HOH . T 5 HOH C 100 800 280 HOH HOH . T 5 HOH C 101 801 374 HOH HOH . T 5 HOH C 102 802 311 HOH HOH . T 5 HOH C 103 803 313 HOH HOH . T 5 HOH C 104 804 319 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . M 2 91.276 95.575 0.181 1 49.95 ? C FMT 603 C 1 HETATM 2 O O1 FMT . . . M 2 91.586 94.444 0.507 1 48.93 ? O1 FMT 603 C 1 HETATM 3 O O2 FMT . . . M 2 91.511 96.53 1.131 1 50.75 ? O2 FMT 603 C 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 215 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 3 #