data_6BEF
#
_model_server_result.job_id            CbGiu7MFqAHNyuDQe1kwmA 
_model_server_result.datetime_utc      '2024-11-14 06:34:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6bef 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":605}' 
#
_entry.id    6BEF 
#
_exptl.entry_id    6BEF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6BEF 
_cell.length_a            191.06 
_cell.length_b            191.06 
_cell.length_c            254.32 
_cell.Z_PDB               36 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6BEF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 H N N 
? 4 J N N 
? 4 K N N 
? 4 Q N N 
? 4 R N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 185 n n 
C1 C2 EDO sing 186 n n 
C1 H11 EDO sing 187 n n 
C1 H12 EDO sing 188 n n 
O1 HO1 EDO sing 189 n n 
C2 O2 EDO sing 190 n n 
C2 H21 EDO sing 191 n n 
C2 H22 EDO sing 192 n n 
O2 HO2 EDO sing 193 n n 
#
_atom_sites.entry_id                     6BEF 
_atom_sites.fract_transf_matrix[1][1]    0.005234 
_atom_sites.fract_transf_matrix[1][2]    0.003022 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006044 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003932 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 3YI A 1 601 1 3YI 3YI . 
E 3 FMT A 1 602 6 FMT FMT . 
F 3 FMT A 1 603 12 FMT FMT . 
G 4 EDO A 1 604 2 EDO EDO . 
H 4 EDO A 1 605 9 EDO EDO . 
I 3 FMT B 1 601 9 FMT FMT . 
J 4 EDO B 1 602 3 EDO EDO . 
K 4 EDO B 1 603 10 EDO EDO . 
L 3 FMT C 1 601 1 FMT FMT . 
M 3 FMT C 1 602 2 FMT FMT . 
N 3 FMT C 1 603 8 FMT FMT . 
O 3 FMT C 1 604 10 FMT FMT . 
P 3 FMT C 1 605 11 FMT FMT . 
Q 4 EDO C 1 606 1 EDO EDO . 
R 4 EDO C 1 607 11 EDO EDO . 
S 5 HOH A 1 701 734 HOH HOH . 
S 5 HOH A 2 702 723 HOH HOH . 
S 5 HOH A 3 703 630 HOH HOH . 
S 5 HOH A 4 704 607 HOH HOH . 
S 5 HOH A 5 705 703 HOH HOH . 
S 5 HOH A 6 706 623 HOH HOH . 
S 5 HOH A 7 707 691 HOH HOH . 
S 5 HOH A 8 708 737 HOH HOH . 
S 5 HOH A 9 709 100 HOH HOH . 
S 5 HOH A 10 710 733 HOH HOH . 
S 5 HOH A 11 711 738 HOH HOH . 
S 5 HOH A 12 712 590 HOH HOH . 
S 5 HOH A 13 713 646 HOH HOH . 
S 5 HOH A 14 714 736 HOH HOH . 
S 5 HOH A 15 715 34 HOH HOH . 
S 5 HOH A 16 716 178 HOH HOH . 
S 5 HOH A 17 717 682 HOH HOH . 
S 5 HOH A 18 718 510 HOH HOH . 
S 5 HOH A 19 719 349 HOH HOH . 
S 5 HOH A 20 720 550 HOH HOH . 
S 5 HOH A 21 721 467 HOH HOH . 
S 5 HOH A 22 722 196 HOH HOH . 
S 5 HOH A 23 723 332 HOH HOH . 
S 5 HOH A 24 724 621 HOH HOH . 
S 5 HOH A 25 725 289 HOH HOH . 
S 5 HOH A 26 726 1 HOH HOH . 
S 5 HOH A 27 727 42 HOH HOH . 
S 5 HOH A 28 728 676 HOH HOH . 
S 5 HOH A 29 729 509 HOH HOH . 
S 5 HOH A 30 730 28 HOH HOH . 
S 5 HOH A 31 731 372 HOH HOH . 
S 5 HOH A 32 732 413 HOH HOH . 
S 5 HOH A 33 733 612 HOH HOH . 
S 5 HOH A 34 734 575 HOH HOH . 
S 5 HOH A 35 735 31 HOH HOH . 
S 5 HOH A 36 736 85 HOH HOH . 
S 5 HOH A 37 737 340 HOH HOH . 
S 5 HOH A 38 738 638 HOH HOH . 
S 5 HOH A 39 739 589 HOH HOH . 
S 5 HOH A 40 740 582 HOH HOH . 
S 5 HOH A 41 741 315 HOH HOH . 
S 5 HOH A 42 742 321 HOH HOH . 
S 5 HOH A 43 743 10 HOH HOH . 
S 5 HOH A 44 744 707 HOH HOH . 
S 5 HOH A 45 745 56 HOH HOH . 
S 5 HOH A 46 746 208 HOH HOH . 
S 5 HOH A 47 747 547 HOH HOH . 
S 5 HOH A 48 748 166 HOH HOH . 
S 5 HOH A 49 749 231 HOH HOH . 
S 5 HOH A 50 750 398 HOH HOH . 
S 5 HOH A 51 751 629 HOH HOH . 
S 5 HOH A 52 752 541 HOH HOH . 
S 5 HOH A 53 753 644 HOH HOH . 
S 5 HOH A 54 754 17 HOH HOH . 
S 5 HOH A 55 755 692 HOH HOH . 
S 5 HOH A 56 756 616 HOH HOH . 
S 5 HOH A 57 757 62 HOH HOH . 
S 5 HOH A 58 758 24 HOH HOH . 
S 5 HOH A 59 759 105 HOH HOH . 
S 5 HOH A 60 760 18 HOH HOH . 
S 5 HOH A 61 761 419 HOH HOH . 
S 5 HOH A 62 762 726 HOH HOH . 
S 5 HOH A 63 763 80 HOH HOH . 
S 5 HOH A 64 764 3 HOH HOH . 
S 5 HOH A 65 765 70 HOH HOH . 
S 5 HOH A 66 766 152 HOH HOH . 
S 5 HOH A 67 767 46 HOH HOH . 
S 5 HOH A 68 768 181 HOH HOH . 
S 5 HOH A 69 769 709 HOH HOH . 
S 5 HOH A 70 770 220 HOH HOH . 
S 5 HOH A 71 771 234 HOH HOH . 
S 5 HOH A 72 772 552 HOH HOH . 
S 5 HOH A 73 773 102 HOH HOH . 
S 5 HOH A 74 774 203 HOH HOH . 
S 5 HOH A 75 775 628 HOH HOH . 
S 5 HOH A 76 776 555 HOH HOH . 
S 5 HOH A 77 777 122 HOH HOH . 
S 5 HOH A 78 778 449 HOH HOH . 
S 5 HOH A 79 779 680 HOH HOH . 
S 5 HOH A 80 780 696 HOH HOH . 
S 5 HOH A 81 781 177 HOH HOH . 
S 5 HOH A 82 782 625 HOH HOH . 
S 5 HOH A 83 783 41 HOH HOH . 
S 5 HOH A 84 784 143 HOH HOH . 
S 5 HOH A 85 785 108 HOH HOH . 
S 5 HOH A 86 786 132 HOH HOH . 
S 5 HOH A 87 787 681 HOH HOH . 
S 5 HOH A 88 788 336 HOH HOH . 
S 5 HOH A 89 789 662 HOH HOH . 
S 5 HOH A 90 790 319 HOH HOH . 
S 5 HOH A 91 791 365 HOH HOH . 
S 5 HOH A 92 792 522 HOH HOH . 
S 5 HOH A 93 793 68 HOH HOH . 
S 5 HOH A 94 794 668 HOH HOH . 
S 5 HOH A 95 795 168 HOH HOH . 
S 5 HOH A 96 796 200 HOH HOH . 
S 5 HOH A 97 797 626 HOH HOH . 
S 5 HOH A 98 798 647 HOH HOH . 
S 5 HOH A 99 799 653 HOH HOH . 
S 5 HOH A 100 800 652 HOH HOH . 
T 5 HOH B 1 701 677 HOH HOH . 
T 5 HOH B 2 702 120 HOH HOH . 
T 5 HOH B 3 703 111 HOH HOH . 
T 5 HOH B 4 704 645 HOH HOH . 
T 5 HOH B 5 705 115 HOH HOH . 
T 5 HOH B 6 706 634 HOH HOH . 
T 5 HOH B 7 707 229 HOH HOH . 
T 5 HOH B 8 708 659 HOH HOH . 
T 5 HOH B 9 709 373 HOH HOH . 
T 5 HOH B 10 710 544 HOH HOH . 
T 5 HOH B 11 711 631 HOH HOH . 
T 5 HOH B 12 712 666 HOH HOH . 
T 5 HOH B 13 713 296 HOH HOH . 
T 5 HOH B 14 714 269 HOH HOH . 
T 5 HOH B 15 715 388 HOH HOH . 
T 5 HOH B 16 716 660 HOH HOH . 
T 5 HOH B 17 717 673 HOH HOH . 
T 5 HOH B 18 718 74 HOH HOH . 
T 5 HOH B 19 719 422 HOH HOH . 
T 5 HOH B 20 720 426 HOH HOH . 
T 5 HOH B 21 721 658 HOH HOH . 
T 5 HOH B 22 722 670 HOH HOH . 
T 5 HOH B 23 723 651 HOH HOH . 
T 5 HOH B 24 724 717 HOH HOH . 
T 5 HOH B 25 725 672 HOH HOH . 
T 5 HOH B 26 726 728 HOH HOH . 
T 5 HOH B 27 727 66 HOH HOH . 
T 5 HOH B 28 728 130 HOH HOH . 
T 5 HOH B 29 729 675 HOH HOH . 
T 5 HOH B 30 730 150 HOH HOH . 
T 5 HOH B 31 731 49 HOH HOH . 
T 5 HOH B 32 732 297 HOH HOH . 
T 5 HOH B 33 733 27 HOH HOH . 
T 5 HOH B 34 734 704 HOH HOH . 
T 5 HOH B 35 735 156 HOH HOH . 
T 5 HOH B 36 736 78 HOH HOH . 
T 5 HOH B 37 737 47 HOH HOH . 
T 5 HOH B 38 738 202 HOH HOH . 
T 5 HOH B 39 739 64 HOH HOH . 
T 5 HOH B 40 740 661 HOH HOH . 
T 5 HOH B 41 741 142 HOH HOH . 
T 5 HOH B 42 742 83 HOH HOH . 
T 5 HOH B 43 743 149 HOH HOH . 
T 5 HOH B 44 744 516 HOH HOH . 
T 5 HOH B 45 745 639 HOH HOH . 
T 5 HOH B 46 746 109 HOH HOH . 
T 5 HOH B 47 747 30 HOH HOH . 
T 5 HOH B 48 748 453 HOH HOH . 
T 5 HOH B 49 749 257 HOH HOH . 
T 5 HOH B 50 750 440 HOH HOH . 
T 5 HOH B 51 751 101 HOH HOH . 
T 5 HOH B 52 752 514 HOH HOH . 
T 5 HOH B 53 753 69 HOH HOH . 
T 5 HOH B 54 754 338 HOH HOH . 
T 5 HOH B 55 755 706 HOH HOH . 
T 5 HOH B 56 756 167 HOH HOH . 
T 5 HOH B 57 757 127 HOH HOH . 
T 5 HOH B 58 758 13 HOH HOH . 
T 5 HOH B 59 759 276 HOH HOH . 
T 5 HOH B 60 760 165 HOH HOH . 
T 5 HOH B 61 761 235 HOH HOH . 
T 5 HOH B 62 762 175 HOH HOH . 
T 5 HOH B 63 763 146 HOH HOH . 
T 5 HOH B 64 764 226 HOH HOH . 
T 5 HOH B 65 765 287 HOH HOH . 
T 5 HOH B 66 766 38 HOH HOH . 
T 5 HOH B 67 767 674 HOH HOH . 
T 5 HOH B 68 768 719 HOH HOH . 
T 5 HOH B 69 769 574 HOH HOH . 
T 5 HOH B 70 770 466 HOH HOH . 
T 5 HOH B 71 771 656 HOH HOH . 
T 5 HOH B 72 772 727 HOH HOH . 
T 5 HOH B 73 773 267 HOH HOH . 
U 5 HOH C 1 701 732 HOH HOH . 
U 5 HOH C 2 702 725 HOH HOH . 
U 5 HOH C 3 703 2 HOH HOH . 
U 5 HOH C 4 704 722 HOH HOH . 
U 5 HOH C 5 705 724 HOH HOH . 
U 5 HOH C 6 706 730 HOH HOH . 
U 5 HOH C 7 707 624 HOH HOH . 
U 5 HOH C 8 708 15 HOH HOH . 
U 5 HOH C 9 709 632 HOH HOH . 
U 5 HOH C 10 710 688 HOH HOH . 
U 5 HOH C 11 711 665 HOH HOH . 
U 5 HOH C 12 712 643 HOH HOH . 
U 5 HOH C 13 713 721 HOH HOH . 
U 5 HOH C 14 714 657 HOH HOH . 
U 5 HOH C 15 715 425 HOH HOH . 
U 5 HOH C 16 716 720 HOH HOH . 
U 5 HOH C 17 717 697 HOH HOH . 
U 5 HOH C 18 718 667 HOH HOH . 
U 5 HOH C 19 719 40 HOH HOH . 
U 5 HOH C 20 720 650 HOH HOH . 
U 5 HOH C 21 721 731 HOH HOH . 
U 5 HOH C 22 722 648 HOH HOH . 
U 5 HOH C 23 723 693 HOH HOH . 
U 5 HOH C 24 724 195 HOH HOH . 
U 5 HOH C 25 725 655 HOH HOH . 
U 5 HOH C 26 726 687 HOH HOH . 
U 5 HOH C 27 727 347 HOH HOH . 
U 5 HOH C 28 728 633 HOH HOH . 
U 5 HOH C 29 729 636 HOH HOH . 
U 5 HOH C 30 730 566 HOH HOH . 
U 5 HOH C 31 731 468 HOH HOH . 
U 5 HOH C 32 732 735 HOH HOH . 
U 5 HOH C 33 733 729 HOH HOH . 
U 5 HOH C 34 734 32 HOH HOH . 
U 5 HOH C 35 735 33 HOH HOH . 
U 5 HOH C 36 736 55 HOH HOH . 
U 5 HOH C 37 737 337 HOH HOH . 
U 5 HOH C 38 738 112 HOH HOH . 
U 5 HOH C 39 739 44 HOH HOH . 
U 5 HOH C 40 740 57 HOH HOH . 
U 5 HOH C 41 741 395 HOH HOH . 
U 5 HOH C 42 742 255 HOH HOH . 
U 5 HOH C 43 743 542 HOH HOH . 
U 5 HOH C 44 744 191 HOH HOH . 
U 5 HOH C 45 745 482 HOH HOH . 
U 5 HOH C 46 746 718 HOH HOH . 
U 5 HOH C 47 747 171 HOH HOH . 
U 5 HOH C 48 748 162 HOH HOH . 
U 5 HOH C 49 749 206 HOH HOH . 
U 5 HOH C 50 750 25 HOH HOH . 
U 5 HOH C 51 751 366 HOH HOH . 
U 5 HOH C 52 752 205 HOH HOH . 
U 5 HOH C 53 753 53 HOH HOH . 
U 5 HOH C 54 754 35 HOH HOH . 
U 5 HOH C 55 755 21 HOH HOH . 
U 5 HOH C 56 756 90 HOH HOH . 
U 5 HOH C 57 757 133 HOH HOH . 
U 5 HOH C 58 758 141 HOH HOH . 
U 5 HOH C 59 759 368 HOH HOH . 
U 5 HOH C 60 760 16 HOH HOH . 
U 5 HOH C 61 761 458 HOH HOH . 
U 5 HOH C 62 762 104 HOH HOH . 
U 5 HOH C 63 763 551 HOH HOH . 
U 5 HOH C 64 764 184 HOH HOH . 
U 5 HOH C 65 765 695 HOH HOH . 
U 5 HOH C 66 766 199 HOH HOH . 
U 5 HOH C 67 767 444 HOH HOH . 
U 5 HOH C 68 768 399 HOH HOH . 
U 5 HOH C 69 769 649 HOH HOH . 
U 5 HOH C 70 770 472 HOH HOH . 
U 5 HOH C 71 771 316 HOH HOH . 
U 5 HOH C 72 772 54 HOH HOH . 
U 5 HOH C 73 773 669 HOH HOH . 
U 5 HOH C 74 774 232 HOH HOH . 
U 5 HOH C 75 775 37 HOH HOH . 
U 5 HOH C 76 776 160 HOH HOH . 
U 5 HOH C 77 777 134 HOH HOH . 
U 5 HOH C 78 778 694 HOH HOH . 
U 5 HOH C 79 779 335 HOH HOH . 
U 5 HOH C 80 780 517 HOH HOH . 
U 5 HOH C 81 781 39 HOH HOH . 
U 5 HOH C 82 782 654 HOH HOH . 
U 5 HOH C 83 783 627 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . H 4 140.372 78.58 1.652 1 80.74 ? C1 EDO 605 A 1 
HETATM 2 O O1 EDO . . . H 4 139.094 78.068 1.316 1 80.45 ? O1 EDO 605 A 1 
HETATM 3 C C2 EDO . . . H 4 140.377 80.11 1.44 1 80.46 ? C2 EDO 605 A 1 
HETATM 4 O O2 EDO . . . H 4 141.642 80.649 1.783 1 80.15 ? O2 EDO 605 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    27 
_model_server_stats.query_time_ms           273 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#