data_6BEH # _model_server_result.job_id zMM1MN-ijaDaK6jxispQRQ _model_server_result.datetime_utc '2024-11-14 17:26:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6beh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":603}' # _entry.id 6BEH # _exptl.entry_id 6BEH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6BEH _cell.length_a 190.79 _cell.length_b 190.79 _cell.length_c 253.53 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BEH _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 J N N ? 4 K N N ? 4 M N N ? 4 P N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6BEH _atom_sites.fract_transf_matrix[1][1] 0.005241 _atom_sites.fract_transf_matrix[1][2] 0.003026 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006052 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003944 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 RPT A 1 601 1 RPT RPT . E 3 FMT A 1 602 6 FMT FMT . F 3 FMT A 1 603 8 FMT FMT . G 3 FMT A 1 604 12 FMT FMT . H 3 FMT A 1 605 13 FMT FMT . I 3 FMT A 1 606 15 FMT FMT . J 4 EDO A 1 607 2 EDO EDO . K 4 EDO A 1 608 5 EDO EDO . L 3 FMT B 1 601 14 FMT FMT . M 4 EDO B 1 602 3 EDO EDO . N 3 FMT C 1 601 1 FMT FMT . O 3 FMT C 1 602 2 FMT FMT . P 4 EDO C 1 603 1 EDO EDO . Q 5 HOH A 1 701 865 HOH HOH . Q 5 HOH A 2 702 869 HOH HOH . Q 5 HOH A 3 703 861 HOH HOH . Q 5 HOH A 4 704 872 HOH HOH . Q 5 HOH A 5 705 676 HOH HOH . Q 5 HOH A 6 706 820 HOH HOH . Q 5 HOH A 7 707 809 HOH HOH . Q 5 HOH A 8 708 712 HOH HOH . Q 5 HOH A 9 709 853 HOH HOH . Q 5 HOH A 10 710 842 HOH HOH . Q 5 HOH A 11 711 687 HOH HOH . Q 5 HOH A 12 712 841 HOH HOH . Q 5 HOH A 13 713 615 HOH HOH . Q 5 HOH A 14 714 814 HOH HOH . Q 5 HOH A 15 715 629 HOH HOH . Q 5 HOH A 16 716 619 HOH HOH . Q 5 HOH A 17 717 24 HOH HOH . Q 5 HOH A 18 718 701 HOH HOH . Q 5 HOH A 19 719 710 HOH HOH . Q 5 HOH A 20 720 637 HOH HOH . Q 5 HOH A 21 721 693 HOH HOH . Q 5 HOH A 22 722 863 HOH HOH . Q 5 HOH A 23 723 661 HOH HOH . Q 5 HOH A 24 724 203 HOH HOH . Q 5 HOH A 25 725 855 HOH HOH . Q 5 HOH A 26 726 550 HOH HOH . Q 5 HOH A 27 727 840 HOH HOH . Q 5 HOH A 28 728 812 HOH HOH . Q 5 HOH A 29 729 733 HOH HOH . Q 5 HOH A 30 730 605 HOH HOH . Q 5 HOH A 31 731 626 HOH HOH . Q 5 HOH A 32 732 34 HOH HOH . Q 5 HOH A 33 733 546 HOH HOH . Q 5 HOH A 34 734 691 HOH HOH . Q 5 HOH A 35 735 61 HOH HOH . Q 5 HOH A 36 736 681 HOH HOH . Q 5 HOH A 37 737 734 HOH HOH . Q 5 HOH A 38 738 745 HOH HOH . Q 5 HOH A 39 739 803 HOH HOH . Q 5 HOH A 40 740 407 HOH HOH . Q 5 HOH A 41 741 52 HOH HOH . Q 5 HOH A 42 742 653 HOH HOH . Q 5 HOH A 43 743 630 HOH HOH . Q 5 HOH A 44 744 275 HOH HOH . Q 5 HOH A 45 745 813 HOH HOH . Q 5 HOH A 46 746 850 HOH HOH . Q 5 HOH A 47 747 807 HOH HOH . Q 5 HOH A 48 748 666 HOH HOH . Q 5 HOH A 49 749 541 HOH HOH . Q 5 HOH A 50 750 729 HOH HOH . Q 5 HOH A 51 751 650 HOH HOH . Q 5 HOH A 52 752 736 HOH HOH . Q 5 HOH A 53 753 652 HOH HOH . Q 5 HOH A 54 754 827 HOH HOH . Q 5 HOH A 55 755 31 HOH HOH . Q 5 HOH A 56 756 177 HOH HOH . Q 5 HOH A 57 757 238 HOH HOH . Q 5 HOH A 58 758 765 HOH HOH . Q 5 HOH A 59 759 622 HOH HOH . Q 5 HOH A 60 760 789 HOH HOH . Q 5 HOH A 61 761 735 HOH HOH . Q 5 HOH A 62 762 781 HOH HOH . Q 5 HOH A 63 763 621 HOH HOH . Q 5 HOH A 64 764 648 HOH HOH . Q 5 HOH A 65 765 642 HOH HOH . Q 5 HOH A 66 766 743 HOH HOH . Q 5 HOH A 67 767 80 HOH HOH . Q 5 HOH A 68 768 651 HOH HOH . Q 5 HOH A 69 769 768 HOH HOH . Q 5 HOH A 70 770 677 HOH HOH . Q 5 HOH A 71 771 555 HOH HOH . Q 5 HOH A 72 772 843 HOH HOH . Q 5 HOH A 73 773 722 HOH HOH . Q 5 HOH A 74 774 635 HOH HOH . Q 5 HOH A 75 775 837 HOH HOH . Q 5 HOH A 76 776 723 HOH HOH . Q 5 HOH A 77 777 766 HOH HOH . Q 5 HOH A 78 778 664 HOH HOH . Q 5 HOH A 79 779 168 HOH HOH . Q 5 HOH A 80 780 618 HOH HOH . Q 5 HOH A 81 781 18 HOH HOH . Q 5 HOH A 82 782 790 HOH HOH . Q 5 HOH A 83 783 717 HOH HOH . Q 5 HOH A 84 784 308 HOH HOH . Q 5 HOH A 85 785 628 HOH HOH . Q 5 HOH A 86 786 251 HOH HOH . Q 5 HOH A 87 787 698 HOH HOH . Q 5 HOH A 88 788 231 HOH HOH . Q 5 HOH A 89 789 852 HOH HOH . Q 5 HOH A 90 790 45 HOH HOH . Q 5 HOH A 91 791 826 HOH HOH . Q 5 HOH A 92 792 3 HOH HOH . Q 5 HOH A 93 793 764 HOH HOH . Q 5 HOH A 94 794 846 HOH HOH . Q 5 HOH A 95 795 828 HOH HOH . Q 5 HOH A 96 796 747 HOH HOH . Q 5 HOH A 97 797 380 HOH HOH . Q 5 HOH A 98 798 862 HOH HOH . Q 5 HOH A 99 799 56 HOH HOH . Q 5 HOH A 100 800 143 HOH HOH . Q 5 HOH A 101 801 864 HOH HOH . R 5 HOH B 1 701 702 HOH HOH . R 5 HOH B 2 702 854 HOH HOH . R 5 HOH B 3 703 697 HOH HOH . R 5 HOH B 4 704 792 HOH HOH . R 5 HOH B 5 705 671 HOH HOH . R 5 HOH B 6 706 811 HOH HOH . R 5 HOH B 7 707 793 HOH HOH . R 5 HOH B 8 708 703 HOH HOH . R 5 HOH B 9 709 404 HOH HOH . R 5 HOH B 10 710 749 HOH HOH . R 5 HOH B 11 711 763 HOH HOH . R 5 HOH B 12 712 706 HOH HOH . R 5 HOH B 13 713 844 HOH HOH . R 5 HOH B 14 714 752 HOH HOH . R 5 HOH B 15 715 663 HOH HOH . R 5 HOH B 16 716 139 HOH HOH . R 5 HOH B 17 717 859 HOH HOH . R 5 HOH B 18 718 646 HOH HOH . R 5 HOH B 19 719 638 HOH HOH . R 5 HOH B 20 720 74 HOH HOH . R 5 HOH B 21 721 739 HOH HOH . R 5 HOH B 22 722 704 HOH HOH . R 5 HOH B 23 723 150 HOH HOH . R 5 HOH B 24 724 756 HOH HOH . R 5 HOH B 25 725 825 HOH HOH . R 5 HOH B 26 726 659 HOH HOH . R 5 HOH B 27 727 851 HOH HOH . R 5 HOH B 28 728 665 HOH HOH . R 5 HOH B 29 729 639 HOH HOH . R 5 HOH B 30 730 66 HOH HOH . R 5 HOH B 31 731 777 HOH HOH . R 5 HOH B 32 732 93 HOH HOH . R 5 HOH B 33 733 633 HOH HOH . R 5 HOH B 34 734 30 HOH HOH . R 5 HOH B 35 735 47 HOH HOH . R 5 HOH B 36 736 640 HOH HOH . R 5 HOH B 37 737 658 HOH HOH . R 5 HOH B 38 738 707 HOH HOH . R 5 HOH B 39 739 791 HOH HOH . R 5 HOH B 40 740 142 HOH HOH . R 5 HOH B 41 741 868 HOH HOH . R 5 HOH B 42 742 276 HOH HOH . R 5 HOH B 43 743 27 HOH HOH . R 5 HOH B 44 744 775 HOH HOH . R 5 HOH B 45 745 121 HOH HOH . R 5 HOH B 46 746 860 HOH HOH . R 5 HOH B 47 747 700 HOH HOH . R 5 HOH B 48 748 78 HOH HOH . R 5 HOH B 49 749 634 HOH HOH . R 5 HOH B 50 750 762 HOH HOH . R 5 HOH B 51 751 180 HOH HOH . R 5 HOH B 52 752 783 HOH HOH . R 5 HOH B 53 753 388 HOH HOH . R 5 HOH B 54 754 824 HOH HOH . R 5 HOH B 55 755 307 HOH HOH . R 5 HOH B 56 756 857 HOH HOH . R 5 HOH B 57 757 779 HOH HOH . R 5 HOH B 58 758 741 HOH HOH . R 5 HOH B 59 759 755 HOH HOH . R 5 HOH B 60 760 761 HOH HOH . R 5 HOH B 61 761 686 HOH HOH . R 5 HOH B 62 762 782 HOH HOH . R 5 HOH B 63 763 13 HOH HOH . R 5 HOH B 64 764 776 HOH HOH . R 5 HOH B 65 765 627 HOH HOH . R 5 HOH B 66 766 175 HOH HOH . R 5 HOH B 67 767 845 HOH HOH . R 5 HOH B 68 768 534 HOH HOH . R 5 HOH B 69 769 742 HOH HOH . R 5 HOH B 70 770 740 HOH HOH . R 5 HOH B 71 771 808 HOH HOH . R 5 HOH B 72 772 778 HOH HOH . S 5 HOH C 1 701 866 HOH HOH . S 5 HOH C 2 702 867 HOH HOH . S 5 HOH C 3 703 870 HOH HOH . S 5 HOH C 4 704 773 HOH HOH . S 5 HOH C 5 705 684 HOH HOH . S 5 HOH C 6 706 800 HOH HOH . S 5 HOH C 7 707 849 HOH HOH . S 5 HOH C 8 708 675 HOH HOH . S 5 HOH C 9 709 356 HOH HOH . S 5 HOH C 10 710 815 HOH HOH . S 5 HOH C 11 711 716 HOH HOH . S 5 HOH C 12 712 674 HOH HOH . S 5 HOH C 13 713 468 HOH HOH . S 5 HOH C 14 714 819 HOH HOH . S 5 HOH C 15 715 805 HOH HOH . S 5 HOH C 16 716 347 HOH HOH . S 5 HOH C 17 717 673 HOH HOH . S 5 HOH C 18 718 848 HOH HOH . S 5 HOH C 19 719 760 HOH HOH . S 5 HOH C 20 720 732 HOH HOH . S 5 HOH C 21 721 753 HOH HOH . S 5 HOH C 22 722 758 HOH HOH . S 5 HOH C 23 723 195 HOH HOH . S 5 HOH C 24 724 689 HOH HOH . S 5 HOH C 25 725 425 HOH HOH . S 5 HOH C 26 726 714 HOH HOH . S 5 HOH C 27 727 670 HOH HOH . S 5 HOH C 28 728 617 HOH HOH . S 5 HOH C 29 729 822 HOH HOH . S 5 HOH C 30 730 672 HOH HOH . S 5 HOH C 31 731 759 HOH HOH . S 5 HOH C 32 732 133 HOH HOH . S 5 HOH C 33 733 542 HOH HOH . S 5 HOH C 34 734 847 HOH HOH . S 5 HOH C 35 735 682 HOH HOH . S 5 HOH C 36 736 667 HOH HOH . S 5 HOH C 37 737 368 HOH HOH . S 5 HOH C 38 738 871 HOH HOH . S 5 HOH C 39 739 737 HOH HOH . S 5 HOH C 40 740 799 HOH HOH . S 5 HOH C 41 741 836 HOH HOH . S 5 HOH C 42 742 757 HOH HOH . S 5 HOH C 43 743 641 HOH HOH . S 5 HOH C 44 744 719 HOH HOH . S 5 HOH C 45 745 798 HOH HOH . S 5 HOH C 46 746 724 HOH HOH . S 5 HOH C 47 747 25 HOH HOH . S 5 HOH C 48 748 647 HOH HOH . S 5 HOH C 49 749 264 HOH HOH . S 5 HOH C 50 750 657 HOH HOH . S 5 HOH C 51 751 236 HOH HOH . S 5 HOH C 52 752 616 HOH HOH . S 5 HOH C 53 753 838 HOH HOH . S 5 HOH C 54 754 656 HOH HOH . S 5 HOH C 55 755 839 HOH HOH . S 5 HOH C 56 756 774 HOH HOH . S 5 HOH C 57 757 662 HOH HOH . S 5 HOH C 58 758 649 HOH HOH . S 5 HOH C 59 759 725 HOH HOH . S 5 HOH C 60 760 669 HOH HOH . S 5 HOH C 61 761 705 HOH HOH . S 5 HOH C 62 762 711 HOH HOH . S 5 HOH C 63 763 643 HOH HOH . S 5 HOH C 64 764 366 HOH HOH . S 5 HOH C 65 765 754 HOH HOH . S 5 HOH C 66 766 660 HOH HOH . S 5 HOH C 67 767 817 HOH HOH . S 5 HOH C 68 768 771 HOH HOH . S 5 HOH C 69 769 731 HOH HOH . S 5 HOH C 70 770 205 HOH HOH . S 5 HOH C 71 771 399 HOH HOH . S 5 HOH C 72 772 655 HOH HOH . S 5 HOH C 73 773 654 HOH HOH . S 5 HOH C 74 774 780 HOH HOH . S 5 HOH C 75 775 668 HOH HOH . S 5 HOH C 76 776 730 HOH HOH . S 5 HOH C 77 777 188 HOH HOH . S 5 HOH C 78 778 191 HOH HOH . S 5 HOH C 79 779 769 HOH HOH . S 5 HOH C 80 780 171 HOH HOH . S 5 HOH C 81 781 57 HOH HOH . S 5 HOH C 82 782 644 HOH HOH . S 5 HOH C 83 783 750 HOH HOH . S 5 HOH C 84 784 248 HOH HOH . S 5 HOH C 85 785 797 HOH HOH . S 5 HOH C 86 786 645 HOH HOH . S 5 HOH C 87 787 816 HOH HOH . S 5 HOH C 88 788 53 HOH HOH . S 5 HOH C 89 789 39 HOH HOH . S 5 HOH C 90 790 32 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . P 4 87.338 109.893 -9.989 1 41.11 ? C1 EDO 603 C 1 HETATM 2 O O1 EDO . . . P 4 86.215 109.052 -10.127 1 38.84 ? O1 EDO 603 C 1 HETATM 3 C C2 EDO . . . P 4 87.123 110.961 -8.884 1 43.91 ? C2 EDO 603 C 1 HETATM 4 O O2 EDO . . . P 4 88.297 111.774 -8.767 1 45.55 ? O2 EDO 603 C 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 222 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #