data_6BGM # _model_server_result.job_id X1Qi6xf6zPImdyT1B3ddFw _model_server_result.datetime_utc '2025-04-24 14:29:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6bgm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6BGM # _exptl.entry_id 6BGM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6BGM _cell.length_a 131.757 _cell.length_b 131.757 _cell.length_c 34.262 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BGM _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 86 A HIS 86 1_555 B FE FE2 . A FE2 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc2 A NE2 HIS 88 A HIS 88 1_555 B FE FE2 . A FE2 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc3 A NE2 HIS 140 A HIS 140 1_555 B FE FE2 . A FE2 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc4 B FE FE2 . A FE2 301 1_555 H O HOH . A HOH 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? metalc ? metalc5 B FE FE2 . A FE2 301 1_555 H O HOH . A HOH 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.581 ? metalc ? metalc6 B FE FE2 . A FE2 301 1_555 H O HOH . A HOH 464 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 303 n n S O2 SO4 doub 304 n n S O3 SO4 sing 305 n n S O4 SO4 sing 306 n n # _atom_sites.entry_id 6BGM _atom_sites.fract_transf_matrix[1][1] 0.00759 _atom_sites.fract_transf_matrix[1][2] 0.004382 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008764 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029187 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE2 A 1 301 301 FE2 FE2 . C 3 SO4 A 1 302 101 SO4 SO4 . D 3 SO4 A 1 303 102 SO4 SO4 . E 3 SO4 A 1 304 103 SO4 SO4 . F 4 GOL A 1 305 201 GOL GOL . G 4 GOL A 1 306 202 GOL GOL . H 5 HOH A 1 401 34 HOH HOH . H 5 HOH A 2 402 64 HOH HOH . H 5 HOH A 3 403 65 HOH HOH . H 5 HOH A 4 404 22 HOH HOH . H 5 HOH A 5 405 20 HOH HOH . H 5 HOH A 6 406 21 HOH HOH . H 5 HOH A 7 407 13 HOH HOH . H 5 HOH A 8 408 4 HOH HOH . H 5 HOH A 9 409 10 HOH HOH . H 5 HOH A 10 410 38 HOH HOH . H 5 HOH A 11 411 58 HOH HOH . H 5 HOH A 12 412 23 HOH HOH . H 5 HOH A 13 413 51 HOH HOH . H 5 HOH A 14 414 15 HOH HOH . H 5 HOH A 15 415 3 HOH HOH . H 5 HOH A 16 416 25 HOH HOH . H 5 HOH A 17 417 12 HOH HOH . H 5 HOH A 18 418 17 HOH HOH . H 5 HOH A 19 419 9 HOH HOH . H 5 HOH A 20 420 40 HOH HOH . H 5 HOH A 21 421 33 HOH HOH . H 5 HOH A 22 422 49 HOH HOH . H 5 HOH A 23 423 26 HOH HOH . H 5 HOH A 24 424 45 HOH HOH . H 5 HOH A 25 425 11 HOH HOH . H 5 HOH A 26 426 36 HOH HOH . H 5 HOH A 27 427 8 HOH HOH . H 5 HOH A 28 428 19 HOH HOH . H 5 HOH A 29 429 2 HOH HOH . H 5 HOH A 30 430 32 HOH HOH . H 5 HOH A 31 431 37 HOH HOH . H 5 HOH A 32 432 29 HOH HOH . H 5 HOH A 33 433 14 HOH HOH . H 5 HOH A 34 434 24 HOH HOH . H 5 HOH A 35 435 66 HOH HOH . H 5 HOH A 36 436 27 HOH HOH . H 5 HOH A 37 437 53 HOH HOH . H 5 HOH A 38 438 6 HOH HOH . H 5 HOH A 39 439 41 HOH HOH . H 5 HOH A 40 440 28 HOH HOH . H 5 HOH A 41 441 39 HOH HOH . H 5 HOH A 42 442 30 HOH HOH . H 5 HOH A 43 443 56 HOH HOH . H 5 HOH A 44 444 68 HOH HOH . H 5 HOH A 45 445 52 HOH HOH . H 5 HOH A 46 446 55 HOH HOH . H 5 HOH A 47 447 31 HOH HOH . H 5 HOH A 48 448 59 HOH HOH . H 5 HOH A 49 449 54 HOH HOH . H 5 HOH A 50 450 72 HOH HOH . H 5 HOH A 51 451 35 HOH HOH . H 5 HOH A 52 452 69 HOH HOH . H 5 HOH A 53 453 47 HOH HOH . H 5 HOH A 54 454 62 HOH HOH . H 5 HOH A 55 455 71 HOH HOH . H 5 HOH A 56 456 74 HOH HOH . H 5 HOH A 57 457 44 HOH HOH . H 5 HOH A 58 458 16 HOH HOH . H 5 HOH A 59 459 18 HOH HOH . H 5 HOH A 60 460 48 HOH HOH . H 5 HOH A 61 461 57 HOH HOH . H 5 HOH A 62 462 50 HOH HOH . H 5 HOH A 63 463 42 HOH HOH . H 5 HOH A 64 464 1 HOH HOH . H 5 HOH A 65 465 5 HOH HOH . H 5 HOH A 66 466 67 HOH HOH . H 5 HOH A 67 467 73 HOH HOH . H 5 HOH A 68 468 75 HOH HOH . H 5 HOH A 69 469 7 HOH HOH . H 5 HOH A 70 470 60 HOH HOH . H 5 HOH A 71 471 46 HOH HOH . H 5 HOH A 72 472 61 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 3 70.751 -11.214 15.953 1 51.38 ? S SO4 302 A 1 HETATM 2 O O1 SO4 . . . C 3 71.58 -10.315 15.163 1 54.09 ? O1 SO4 302 A 1 HETATM 3 O O2 SO4 . . . C 3 69.44 -11.432 15.35 1 41 ? O2 SO4 302 A 1 HETATM 4 O O3 SO4 . . . C 3 70.541 -10.648 17.272 1 65.39 ? O3 SO4 302 A 1 HETATM 5 O O4 SO4 . . . C 3 71.474 -12.472 16.075 1 54.31 ? O4 SO4 302 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 515 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #