data_6BH0 # _model_server_result.job_id ZUPfVtJr9wVZUlcP1DyWCQ _model_server_result.datetime_utc '2024-11-07 16:10:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6bh0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":603}' # _entry.id 6BH0 # _exptl.entry_id 6BH0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.36 _cell.angle_gamma 90 _cell.entry_id 6BH0 _cell.length_a 116.813 _cell.length_b 61.954 _cell.length_c 46.858 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BH0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 225 A HIS 483 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc2 A OE2 GLU 227 A GLU 485 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc3 A NE2 HIS 313 A HIS 571 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc4 B N28 DO1 . A DO1 601 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc5 C MN MN . A MN 602 1_555 E O HOH . A HOH 744 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc6 C MN MN . A MN 602 1_555 E O HOH . A HOH 745 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.955 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 6BH0 _atom_sites.fract_transf_matrix[1][1] 0.008561 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000353 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016141 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021359 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DO1 A 1 601 1 DO1 LIG . C 3 MN A 1 602 1 MN MN . D 4 DMS A 1 603 201 DMS DMS . E 5 HOH A 1 701 158 HOH HOH . E 5 HOH A 2 702 186 HOH HOH . E 5 HOH A 3 703 178 HOH HOH . E 5 HOH A 4 704 27 HOH HOH . E 5 HOH A 5 705 21 HOH HOH . E 5 HOH A 6 706 179 HOH HOH . E 5 HOH A 7 707 24 HOH HOH . E 5 HOH A 8 708 187 HOH HOH . E 5 HOH A 9 709 2 HOH HOH . E 5 HOH A 10 710 8 HOH HOH . E 5 HOH A 11 711 6 HOH HOH . E 5 HOH A 12 712 42 HOH HOH . E 5 HOH A 13 713 112 HOH HOH . E 5 HOH A 14 714 63 HOH HOH . E 5 HOH A 15 715 86 HOH HOH . E 5 HOH A 16 716 29 HOH HOH . E 5 HOH A 17 717 15 HOH HOH . E 5 HOH A 18 718 47 HOH HOH . E 5 HOH A 19 719 23 HOH HOH . E 5 HOH A 20 720 104 HOH HOH . E 5 HOH A 21 721 95 HOH HOH . E 5 HOH A 22 722 19 HOH HOH . E 5 HOH A 23 723 66 HOH HOH . E 5 HOH A 24 724 182 HOH HOH . E 5 HOH A 25 725 57 HOH HOH . E 5 HOH A 26 726 147 HOH HOH . E 5 HOH A 27 727 106 HOH HOH . E 5 HOH A 28 728 105 HOH HOH . E 5 HOH A 29 729 4 HOH HOH . E 5 HOH A 30 730 78 HOH HOH . E 5 HOH A 31 731 18 HOH HOH . E 5 HOH A 32 732 79 HOH HOH . E 5 HOH A 33 733 16 HOH HOH . E 5 HOH A 34 734 85 HOH HOH . E 5 HOH A 35 735 152 HOH HOH . E 5 HOH A 36 736 1 HOH HOH . E 5 HOH A 37 737 35 HOH HOH . E 5 HOH A 38 738 91 HOH HOH . E 5 HOH A 39 739 52 HOH HOH . E 5 HOH A 40 740 55 HOH HOH . E 5 HOH A 41 741 13 HOH HOH . E 5 HOH A 42 742 56 HOH HOH . E 5 HOH A 43 743 109 HOH HOH . E 5 HOH A 44 744 33 HOH HOH . E 5 HOH A 45 745 92 HOH HOH . E 5 HOH A 46 746 87 HOH HOH . E 5 HOH A 47 747 32 HOH HOH . E 5 HOH A 48 748 3 HOH HOH . E 5 HOH A 49 749 170 HOH HOH . E 5 HOH A 50 750 142 HOH HOH . E 5 HOH A 51 751 125 HOH HOH . E 5 HOH A 52 752 96 HOH HOH . E 5 HOH A 53 753 98 HOH HOH . E 5 HOH A 54 754 37 HOH HOH . E 5 HOH A 55 755 93 HOH HOH . E 5 HOH A 56 756 31 HOH HOH . E 5 HOH A 57 757 175 HOH HOH . E 5 HOH A 58 758 61 HOH HOH . E 5 HOH A 59 759 58 HOH HOH . E 5 HOH A 60 760 65 HOH HOH . E 5 HOH A 61 761 12 HOH HOH . E 5 HOH A 62 762 43 HOH HOH . E 5 HOH A 63 763 40 HOH HOH . E 5 HOH A 64 764 131 HOH HOH . E 5 HOH A 65 765 5 HOH HOH . E 5 HOH A 66 766 22 HOH HOH . E 5 HOH A 67 767 167 HOH HOH . E 5 HOH A 68 768 28 HOH HOH . E 5 HOH A 69 769 34 HOH HOH . E 5 HOH A 70 770 69 HOH HOH . E 5 HOH A 71 771 64 HOH HOH . E 5 HOH A 72 772 10 HOH HOH . E 5 HOH A 73 773 161 HOH HOH . E 5 HOH A 74 774 62 HOH HOH . E 5 HOH A 75 775 101 HOH HOH . E 5 HOH A 76 776 126 HOH HOH . E 5 HOH A 77 777 163 HOH HOH . E 5 HOH A 78 778 83 HOH HOH . E 5 HOH A 79 779 48 HOH HOH . E 5 HOH A 80 780 25 HOH HOH . E 5 HOH A 81 781 94 HOH HOH . E 5 HOH A 82 782 45 HOH HOH . E 5 HOH A 83 783 68 HOH HOH . E 5 HOH A 84 784 7 HOH HOH . E 5 HOH A 85 785 26 HOH HOH . E 5 HOH A 86 786 14 HOH HOH . E 5 HOH A 87 787 39 HOH HOH . E 5 HOH A 88 788 159 HOH HOH . E 5 HOH A 89 789 129 HOH HOH . E 5 HOH A 90 790 162 HOH HOH . E 5 HOH A 91 791 154 HOH HOH . E 5 HOH A 92 792 130 HOH HOH . E 5 HOH A 93 793 119 HOH HOH . E 5 HOH A 94 794 46 HOH HOH . E 5 HOH A 95 795 90 HOH HOH . E 5 HOH A 96 796 145 HOH HOH . E 5 HOH A 97 797 59 HOH HOH . E 5 HOH A 98 798 108 HOH HOH . E 5 HOH A 99 799 133 HOH HOH . E 5 HOH A 100 800 9 HOH HOH . E 5 HOH A 101 801 99 HOH HOH . E 5 HOH A 102 802 11 HOH HOH . E 5 HOH A 103 803 53 HOH HOH . E 5 HOH A 104 804 111 HOH HOH . E 5 HOH A 105 805 20 HOH HOH . E 5 HOH A 106 806 183 HOH HOH . E 5 HOH A 107 807 123 HOH HOH . E 5 HOH A 108 808 173 HOH HOH . E 5 HOH A 109 809 74 HOH HOH . E 5 HOH A 110 810 41 HOH HOH . E 5 HOH A 111 811 30 HOH HOH . E 5 HOH A 112 812 135 HOH HOH . E 5 HOH A 113 813 137 HOH HOH . E 5 HOH A 114 814 44 HOH HOH . E 5 HOH A 115 815 17 HOH HOH . E 5 HOH A 116 816 139 HOH HOH . E 5 HOH A 117 817 49 HOH HOH . E 5 HOH A 118 818 102 HOH HOH . E 5 HOH A 119 819 121 HOH HOH . E 5 HOH A 120 820 72 HOH HOH . E 5 HOH A 121 821 177 HOH HOH . E 5 HOH A 122 822 180 HOH HOH . E 5 HOH A 123 823 82 HOH HOH . E 5 HOH A 124 824 181 HOH HOH . E 5 HOH A 125 825 190 HOH HOH . E 5 HOH A 126 826 36 HOH HOH . E 5 HOH A 127 827 150 HOH HOH . E 5 HOH A 128 828 113 HOH HOH . E 5 HOH A 129 829 184 HOH HOH . E 5 HOH A 130 830 97 HOH HOH . E 5 HOH A 131 831 157 HOH HOH . E 5 HOH A 132 832 50 HOH HOH . E 5 HOH A 133 833 73 HOH HOH . E 5 HOH A 134 834 164 HOH HOH . E 5 HOH A 135 835 166 HOH HOH . E 5 HOH A 136 836 172 HOH HOH . E 5 HOH A 137 837 110 HOH HOH . E 5 HOH A 138 838 188 HOH HOH . E 5 HOH A 139 839 84 HOH HOH . E 5 HOH A 140 840 169 HOH HOH . E 5 HOH A 141 841 141 HOH HOH . E 5 HOH A 142 842 67 HOH HOH . E 5 HOH A 143 843 156 HOH HOH . E 5 HOH A 144 844 171 HOH HOH . E 5 HOH A 145 845 144 HOH HOH . E 5 HOH A 146 846 174 HOH HOH . E 5 HOH A 147 847 76 HOH HOH . E 5 HOH A 148 848 88 HOH HOH . E 5 HOH A 149 849 165 HOH HOH . E 5 HOH A 150 850 189 HOH HOH . E 5 HOH A 151 851 136 HOH HOH . E 5 HOH A 152 852 77 HOH HOH . E 5 HOH A 153 853 185 HOH HOH . E 5 HOH A 154 854 134 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . D 4 -24.087 7.905 -10.473 1 69.46 ? S DMS 603 A 1 HETATM 2 O O DMS . . . D 4 -25.555 7.636 -10.539 1 69.24 ? O DMS 603 A 1 HETATM 3 C C1 DMS . . . D 4 -23.404 7.137 -8.98 1 68.92 ? C1 DMS 603 A 1 HETATM 4 C C2 DMS . . . D 4 -23.236 6.911 -11.727 1 69.74 ? C2 DMS 603 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 378 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #