data_6BH3
#
_model_server_result.job_id            gTgG-VCmY0XJTWFyJ0N08w 
_model_server_result.datetime_utc      '2024-11-27 18:08:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6bh3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":609}' 
#
_entry.id    6BH3 
#
_exptl.entry_id    6BH3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          92.58 
_cell.angle_gamma         90 
_cell.entry_id            6BH3 
_cell.length_a            116.667 
_cell.length_b            62.325 
_cell.length_c            46.872 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6BH3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 G N N 
? 6 H N N 
? 6 I N N 
? 6 J N N 
? 6 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 225 A HIS 483 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? 
metalc ? metalc2 A OE1 GLU 227 A GLU 485 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? 
metalc ? metalc3 A NE2 HIS 313 A HIS 571 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? 
metalc ? metalc4 B N10 DQJ . A DQJ 601 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? 
metalc ? metalc5 B O01 DQJ . A DQJ 601 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? 
metalc ? metalc6 C MN MN . A MN 602 1_555 L O HOH . A HOH 726 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 137 n n 
C1 C2 EDO sing 138 n n 
C1 H11 EDO sing 139 n n 
C1 H12 EDO sing 140 n n 
O1 HO1 EDO sing 141 n n 
C2 O2 EDO sing 142 n n 
C2 H21 EDO sing 143 n n 
C2 H22 EDO sing 144 n n 
O2 HO2 EDO sing 145 n n 
#
_atom_sites.entry_id                     6BH3 
_atom_sites.fract_transf_matrix[1][1]    0.008571 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000386 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016045 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.021356 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DQJ A 1 601 1 DQJ N55 . 
C 3 MN A 1 602 1 MN MN . 
D 4 DMS A 1 603 401 DMS DMS . 
E 5 GOL A 1 604 501 GOL GOL . 
F 5 GOL A 1 605 502 GOL GOL . 
G 6 EDO A 1 606 601 EDO EDO . 
H 6 EDO A 1 607 602 EDO EDO . 
I 6 EDO A 1 608 603 EDO EDO . 
J 6 EDO A 1 609 604 EDO EDO . 
K 6 EDO A 1 610 605 EDO EDO . 
L 7 HOH A 1 701 155 HOH HOH . 
L 7 HOH A 2 702 121 HOH HOH . 
L 7 HOH A 3 703 304 HOH HOH . 
L 7 HOH A 4 704 133 HOH HOH . 
L 7 HOH A 5 705 162 HOH HOH . 
L 7 HOH A 6 706 284 HOH HOH . 
L 7 HOH A 7 707 290 HOH HOH . 
L 7 HOH A 8 708 183 HOH HOH . 
L 7 HOH A 9 709 37 HOH HOH . 
L 7 HOH A 10 710 210 HOH HOH . 
L 7 HOH A 11 711 96 HOH HOH . 
L 7 HOH A 12 712 99 HOH HOH . 
L 7 HOH A 13 713 107 HOH HOH . 
L 7 HOH A 14 714 307 HOH HOH . 
L 7 HOH A 15 715 212 HOH HOH . 
L 7 HOH A 16 716 41 HOH HOH . 
L 7 HOH A 17 717 102 HOH HOH . 
L 7 HOH A 18 718 19 HOH HOH . 
L 7 HOH A 19 719 127 HOH HOH . 
L 7 HOH A 20 720 30 HOH HOH . 
L 7 HOH A 21 721 65 HOH HOH . 
L 7 HOH A 22 722 74 HOH HOH . 
L 7 HOH A 23 723 45 HOH HOH . 
L 7 HOH A 24 724 60 HOH HOH . 
L 7 HOH A 25 725 189 HOH HOH . 
L 7 HOH A 26 726 3 HOH HOH . 
L 7 HOH A 27 727 48 HOH HOH . 
L 7 HOH A 28 728 97 HOH HOH . 
L 7 HOH A 29 729 78 HOH HOH . 
L 7 HOH A 30 730 5 HOH HOH . 
L 7 HOH A 31 731 23 HOH HOH . 
L 7 HOH A 32 732 164 HOH HOH . 
L 7 HOH A 33 733 273 HOH HOH . 
L 7 HOH A 34 734 67 HOH HOH . 
L 7 HOH A 35 735 116 HOH HOH . 
L 7 HOH A 36 736 63 HOH HOH . 
L 7 HOH A 37 737 115 HOH HOH . 
L 7 HOH A 38 738 111 HOH HOH . 
L 7 HOH A 39 739 10 HOH HOH . 
L 7 HOH A 40 740 103 HOH HOH . 
L 7 HOH A 41 741 87 HOH HOH . 
L 7 HOH A 42 742 26 HOH HOH . 
L 7 HOH A 43 743 12 HOH HOH . 
L 7 HOH A 44 744 50 HOH HOH . 
L 7 HOH A 45 745 68 HOH HOH . 
L 7 HOH A 46 746 229 HOH HOH . 
L 7 HOH A 47 747 57 HOH HOH . 
L 7 HOH A 48 748 32 HOH HOH . 
L 7 HOH A 49 749 173 HOH HOH . 
L 7 HOH A 50 750 150 HOH HOH . 
L 7 HOH A 51 751 42 HOH HOH . 
L 7 HOH A 52 752 36 HOH HOH . 
L 7 HOH A 53 753 180 HOH HOH . 
L 7 HOH A 54 754 246 HOH HOH . 
L 7 HOH A 55 755 84 HOH HOH . 
L 7 HOH A 56 756 94 HOH HOH . 
L 7 HOH A 57 757 71 HOH HOH . 
L 7 HOH A 58 758 267 HOH HOH . 
L 7 HOH A 59 759 8 HOH HOH . 
L 7 HOH A 60 760 40 HOH HOH . 
L 7 HOH A 61 761 104 HOH HOH . 
L 7 HOH A 62 762 55 HOH HOH . 
L 7 HOH A 63 763 198 HOH HOH . 
L 7 HOH A 64 764 105 HOH HOH . 
L 7 HOH A 65 765 22 HOH HOH . 
L 7 HOH A 66 766 203 HOH HOH . 
L 7 HOH A 67 767 64 HOH HOH . 
L 7 HOH A 68 768 170 HOH HOH . 
L 7 HOH A 69 769 70 HOH HOH . 
L 7 HOH A 70 770 113 HOH HOH . 
L 7 HOH A 71 771 119 HOH HOH . 
L 7 HOH A 72 772 79 HOH HOH . 
L 7 HOH A 73 773 152 HOH HOH . 
L 7 HOH A 74 774 6 HOH HOH . 
L 7 HOH A 75 775 163 HOH HOH . 
L 7 HOH A 76 776 216 HOH HOH . 
L 7 HOH A 77 777 95 HOH HOH . 
L 7 HOH A 78 778 1 HOH HOH . 
L 7 HOH A 79 779 298 HOH HOH . 
L 7 HOH A 80 780 250 HOH HOH . 
L 7 HOH A 81 781 14 HOH HOH . 
L 7 HOH A 82 782 11 HOH HOH . 
L 7 HOH A 83 783 16 HOH HOH . 
L 7 HOH A 84 784 75 HOH HOH . 
L 7 HOH A 85 785 9 HOH HOH . 
L 7 HOH A 86 786 158 HOH HOH . 
L 7 HOH A 87 787 72 HOH HOH . 
L 7 HOH A 88 788 15 HOH HOH . 
L 7 HOH A 89 789 4 HOH HOH . 
L 7 HOH A 90 790 27 HOH HOH . 
L 7 HOH A 91 791 269 HOH HOH . 
L 7 HOH A 92 792 33 HOH HOH . 
L 7 HOH A 93 793 90 HOH HOH . 
L 7 HOH A 94 794 117 HOH HOH . 
L 7 HOH A 95 795 59 HOH HOH . 
L 7 HOH A 96 796 7 HOH HOH . 
L 7 HOH A 97 797 83 HOH HOH . 
L 7 HOH A 98 798 243 HOH HOH . 
L 7 HOH A 99 799 129 HOH HOH . 
L 7 HOH A 100 800 25 HOH HOH . 
L 7 HOH A 101 801 207 HOH HOH . 
L 7 HOH A 102 802 17 HOH HOH . 
L 7 HOH A 103 803 98 HOH HOH . 
L 7 HOH A 104 804 47 HOH HOH . 
L 7 HOH A 105 805 35 HOH HOH . 
L 7 HOH A 106 806 101 HOH HOH . 
L 7 HOH A 107 807 81 HOH HOH . 
L 7 HOH A 108 808 291 HOH HOH . 
L 7 HOH A 109 809 77 HOH HOH . 
L 7 HOH A 110 810 69 HOH HOH . 
L 7 HOH A 111 811 18 HOH HOH . 
L 7 HOH A 112 812 287 HOH HOH . 
L 7 HOH A 113 813 46 HOH HOH . 
L 7 HOH A 114 814 24 HOH HOH . 
L 7 HOH A 115 815 54 HOH HOH . 
L 7 HOH A 116 816 80 HOH HOH . 
L 7 HOH A 117 817 53 HOH HOH . 
L 7 HOH A 118 818 51 HOH HOH . 
L 7 HOH A 119 819 39 HOH HOH . 
L 7 HOH A 120 820 13 HOH HOH . 
L 7 HOH A 121 821 256 HOH HOH . 
L 7 HOH A 122 822 21 HOH HOH . 
L 7 HOH A 123 823 280 HOH HOH . 
L 7 HOH A 124 824 20 HOH HOH . 
L 7 HOH A 125 825 282 HOH HOH . 
L 7 HOH A 126 826 124 HOH HOH . 
L 7 HOH A 127 827 211 HOH HOH . 
L 7 HOH A 128 828 168 HOH HOH . 
L 7 HOH A 129 829 49 HOH HOH . 
L 7 HOH A 130 830 224 HOH HOH . 
L 7 HOH A 131 831 148 HOH HOH . 
L 7 HOH A 132 832 301 HOH HOH . 
L 7 HOH A 133 833 88 HOH HOH . 
L 7 HOH A 134 834 149 HOH HOH . 
L 7 HOH A 135 835 56 HOH HOH . 
L 7 HOH A 136 836 226 HOH HOH . 
L 7 HOH A 137 837 76 HOH HOH . 
L 7 HOH A 138 838 143 HOH HOH . 
L 7 HOH A 139 839 73 HOH HOH . 
L 7 HOH A 140 840 182 HOH HOH . 
L 7 HOH A 141 841 169 HOH HOH . 
L 7 HOH A 142 842 89 HOH HOH . 
L 7 HOH A 143 843 277 HOH HOH . 
L 7 HOH A 144 844 126 HOH HOH . 
L 7 HOH A 145 845 130 HOH HOH . 
L 7 HOH A 146 846 146 HOH HOH . 
L 7 HOH A 147 847 234 HOH HOH . 
L 7 HOH A 148 848 306 HOH HOH . 
L 7 HOH A 149 849 91 HOH HOH . 
L 7 HOH A 150 850 2 HOH HOH . 
L 7 HOH A 151 851 187 HOH HOH . 
L 7 HOH A 152 852 176 HOH HOH . 
L 7 HOH A 153 853 154 HOH HOH . 
L 7 HOH A 154 854 52 HOH HOH . 
L 7 HOH A 155 855 201 HOH HOH . 
L 7 HOH A 156 856 120 HOH HOH . 
L 7 HOH A 157 857 281 HOH HOH . 
L 7 HOH A 158 858 165 HOH HOH . 
L 7 HOH A 159 859 137 HOH HOH . 
L 7 HOH A 160 860 38 HOH HOH . 
L 7 HOH A 161 861 100 HOH HOH . 
L 7 HOH A 162 862 175 HOH HOH . 
L 7 HOH A 163 863 278 HOH HOH . 
L 7 HOH A 164 864 289 HOH HOH . 
L 7 HOH A 165 865 204 HOH HOH . 
L 7 HOH A 166 866 288 HOH HOH . 
L 7 HOH A 167 867 147 HOH HOH . 
L 7 HOH A 168 868 255 HOH HOH . 
L 7 HOH A 169 869 217 HOH HOH . 
L 7 HOH A 170 870 140 HOH HOH . 
L 7 HOH A 171 871 285 HOH HOH . 
L 7 HOH A 172 872 112 HOH HOH . 
L 7 HOH A 173 873 188 HOH HOH . 
L 7 HOH A 174 874 300 HOH HOH . 
L 7 HOH A 175 875 178 HOH HOH . 
L 7 HOH A 176 876 131 HOH HOH . 
L 7 HOH A 177 877 145 HOH HOH . 
L 7 HOH A 178 878 174 HOH HOH . 
L 7 HOH A 179 879 92 HOH HOH . 
L 7 HOH A 180 880 276 HOH HOH . 
L 7 HOH A 181 881 292 HOH HOH . 
L 7 HOH A 182 882 266 HOH HOH . 
L 7 HOH A 183 883 286 HOH HOH . 
L 7 HOH A 184 884 253 HOH HOH . 
L 7 HOH A 185 885 151 HOH HOH . 
L 7 HOH A 186 886 202 HOH HOH . 
L 7 HOH A 187 887 279 HOH HOH . 
L 7 HOH A 188 888 206 HOH HOH . 
L 7 HOH A 189 889 153 HOH HOH . 
L 7 HOH A 190 890 283 HOH HOH . 
L 7 HOH A 191 891 309 HOH HOH . 
L 7 HOH A 192 892 166 HOH HOH . 
L 7 HOH A 193 893 160 HOH HOH . 
L 7 HOH A 194 894 167 HOH HOH . 
L 7 HOH A 195 895 109 HOH HOH . 
L 7 HOH A 196 896 296 HOH HOH . 
L 7 HOH A 197 897 58 HOH HOH . 
L 7 HOH A 198 898 295 HOH HOH . 
L 7 HOH A 199 899 299 HOH HOH . 
L 7 HOH A 200 900 308 HOH HOH . 
L 7 HOH A 201 901 233 HOH HOH . 
L 7 HOH A 202 902 305 HOH HOH . 
L 7 HOH A 203 903 190 HOH HOH . 
L 7 HOH A 204 904 228 HOH HOH . 
L 7 HOH A 205 905 66 HOH HOH . 
L 7 HOH A 206 906 247 HOH HOH . 
L 7 HOH A 207 907 297 HOH HOH . 
L 7 HOH A 208 908 186 HOH HOH . 
L 7 HOH A 209 909 108 HOH HOH . 
L 7 HOH A 210 910 310 HOH HOH . 
L 7 HOH A 211 911 270 HOH HOH . 
L 7 HOH A 212 912 303 HOH HOH . 
L 7 HOH A 213 913 125 HOH HOH . 
L 7 HOH A 214 914 268 HOH HOH . 
L 7 HOH A 215 915 219 HOH HOH . 
L 7 HOH A 216 916 302 HOH HOH . 
L 7 HOH A 217 917 134 HOH HOH . 
L 7 HOH A 218 918 62 HOH HOH . 
L 7 HOH A 219 919 93 HOH HOH . 
L 7 HOH A 220 920 181 HOH HOH . 
L 7 HOH A 221 921 238 HOH HOH . 
L 7 HOH A 222 922 261 HOH HOH . 
L 7 HOH A 223 923 122 HOH HOH . 
L 7 HOH A 224 924 144 HOH HOH . 
L 7 HOH A 225 925 252 HOH HOH . 
L 7 HOH A 226 926 248 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . J 6 -35.125 -1.486 -3.948 1 67.7 ? C1 EDO 609 A 1 
HETATM 2 O O1 EDO . . . J 6 -35.67 -0.162 -3.951 1 61.65 ? O1 EDO 609 A 1 
HETATM 3 C C2 EDO . . . J 6 -35.042 -2.002 -2.516 1 72.95 ? C2 EDO 609 A 1 
HETATM 4 O O2 EDO . . . J 6 -34.469 -3.315 -2.512 1 73.36 ? O2 EDO 609 A 1 
#
_model_server_stats.io_time_ms              52 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           4 
#