data_6BH4
#
_model_server_result.job_id            NwWc3ltNPBxenRwf-uUnhw 
_model_server_result.datetime_utc      '2024-11-27 20:04:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6bh4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":610}' 
#
_entry.id    6BH4 
#
_exptl.entry_id    6BH4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          92.27 
_cell.angle_gamma         90 
_cell.entry_id            6BH4 
_cell.length_a            117.249 
_cell.length_b            62.536 
_cell.length_c            46.664 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6BH4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             K 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 225 A HIS 483 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? 
metalc ? metalc2 A OE1 GLU 227 A GLU 485 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? 
metalc ? metalc3 A NE2 HIS 313 A HIS 571 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? 
metalc ? metalc4 B N09 DQS . A DQS 601 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? 
metalc ? metalc5 C MN MN . A MN 602 1_555 L O HOH . A HOH 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? 
metalc ? metalc6 C MN MN . A MN 602 1_555 L O HOH . A HOH 726 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 184 n n 
C1 C2 GOL sing 185 n n 
C1 H11 GOL sing 186 n n 
C1 H12 GOL sing 187 n n 
O1 HO1 GOL sing 188 n n 
C2 O2 GOL sing 189 n n 
C2 C3 GOL sing 190 n n 
C2 H2 GOL sing 191 n n 
O2 HO2 GOL sing 192 n n 
C3 O3 GOL sing 193 n n 
C3 H31 GOL sing 194 n n 
C3 H32 GOL sing 195 n n 
O3 HO3 GOL sing 196 n n 
#
_atom_sites.entry_id                     6BH4 
_atom_sites.fract_transf_matrix[1][1]    0.008529 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000339 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015991 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.021447 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DQS A 1 601 1 DQS LIG . 
C 3 MN A 1 602 1 MN MN . 
D 4 EDO A 1 603 201 EDO EDO . 
E 4 EDO A 1 604 202 EDO EDO . 
F 4 EDO A 1 605 203 EDO EDO . 
G 4 EDO A 1 606 204 EDO EDO . 
H 4 EDO A 1 607 205 EDO EDO . 
I 4 EDO A 1 608 206 EDO EDO . 
J 4 EDO A 1 609 207 EDO EDO . 
K 5 GOL A 1 610 301 GOL GOL . 
L 6 HOH A 1 701 89 HOH HOH . 
L 6 HOH A 2 702 80 HOH HOH . 
L 6 HOH A 3 703 142 HOH HOH . 
L 6 HOH A 4 704 5 HOH HOH . 
L 6 HOH A 5 705 65 HOH HOH . 
L 6 HOH A 6 706 126 HOH HOH . 
L 6 HOH A 7 707 3 HOH HOH . 
L 6 HOH A 8 708 26 HOH HOH . 
L 6 HOH A 9 709 47 HOH HOH . 
L 6 HOH A 10 710 90 HOH HOH . 
L 6 HOH A 11 711 85 HOH HOH . 
L 6 HOH A 12 712 6 HOH HOH . 
L 6 HOH A 13 713 30 HOH HOH . 
L 6 HOH A 14 714 20 HOH HOH . 
L 6 HOH A 15 715 69 HOH HOH . 
L 6 HOH A 16 716 138 HOH HOH . 
L 6 HOH A 17 717 106 HOH HOH . 
L 6 HOH A 18 718 56 HOH HOH . 
L 6 HOH A 19 719 128 HOH HOH . 
L 6 HOH A 20 720 39 HOH HOH . 
L 6 HOH A 21 721 75 HOH HOH . 
L 6 HOH A 22 722 81 HOH HOH . 
L 6 HOH A 23 723 28 HOH HOH . 
L 6 HOH A 24 724 92 HOH HOH . 
L 6 HOH A 25 725 61 HOH HOH . 
L 6 HOH A 26 726 35 HOH HOH . 
L 6 HOH A 27 727 13 HOH HOH . 
L 6 HOH A 28 728 87 HOH HOH . 
L 6 HOH A 29 729 53 HOH HOH . 
L 6 HOH A 30 730 52 HOH HOH . 
L 6 HOH A 31 731 37 HOH HOH . 
L 6 HOH A 32 732 14 HOH HOH . 
L 6 HOH A 33 733 140 HOH HOH . 
L 6 HOH A 34 734 23 HOH HOH . 
L 6 HOH A 35 735 2 HOH HOH . 
L 6 HOH A 36 736 86 HOH HOH . 
L 6 HOH A 37 737 102 HOH HOH . 
L 6 HOH A 38 738 31 HOH HOH . 
L 6 HOH A 39 739 68 HOH HOH . 
L 6 HOH A 40 740 36 HOH HOH . 
L 6 HOH A 41 741 29 HOH HOH . 
L 6 HOH A 42 742 110 HOH HOH . 
L 6 HOH A 43 743 10 HOH HOH . 
L 6 HOH A 44 744 32 HOH HOH . 
L 6 HOH A 45 745 38 HOH HOH . 
L 6 HOH A 46 746 82 HOH HOH . 
L 6 HOH A 47 747 21 HOH HOH . 
L 6 HOH A 48 748 77 HOH HOH . 
L 6 HOH A 49 749 79 HOH HOH . 
L 6 HOH A 50 750 12 HOH HOH . 
L 6 HOH A 51 751 11 HOH HOH . 
L 6 HOH A 52 752 63 HOH HOH . 
L 6 HOH A 53 753 109 HOH HOH . 
L 6 HOH A 54 754 50 HOH HOH . 
L 6 HOH A 55 755 78 HOH HOH . 
L 6 HOH A 56 756 7 HOH HOH . 
L 6 HOH A 57 757 66 HOH HOH . 
L 6 HOH A 58 758 76 HOH HOH . 
L 6 HOH A 59 759 60 HOH HOH . 
L 6 HOH A 60 760 57 HOH HOH . 
L 6 HOH A 61 761 125 HOH HOH . 
L 6 HOH A 62 762 43 HOH HOH . 
L 6 HOH A 63 763 139 HOH HOH . 
L 6 HOH A 64 764 1 HOH HOH . 
L 6 HOH A 65 765 49 HOH HOH . 
L 6 HOH A 66 766 4 HOH HOH . 
L 6 HOH A 67 767 16 HOH HOH . 
L 6 HOH A 68 768 41 HOH HOH . 
L 6 HOH A 69 769 17 HOH HOH . 
L 6 HOH A 70 770 131 HOH HOH . 
L 6 HOH A 71 771 15 HOH HOH . 
L 6 HOH A 72 772 22 HOH HOH . 
L 6 HOH A 73 773 72 HOH HOH . 
L 6 HOH A 74 774 40 HOH HOH . 
L 6 HOH A 75 775 18 HOH HOH . 
L 6 HOH A 76 776 9 HOH HOH . 
L 6 HOH A 77 777 70 HOH HOH . 
L 6 HOH A 78 778 42 HOH HOH . 
L 6 HOH A 79 779 133 HOH HOH . 
L 6 HOH A 80 780 64 HOH HOH . 
L 6 HOH A 81 781 84 HOH HOH . 
L 6 HOH A 82 782 19 HOH HOH . 
L 6 HOH A 83 783 99 HOH HOH . 
L 6 HOH A 84 784 25 HOH HOH . 
L 6 HOH A 85 785 62 HOH HOH . 
L 6 HOH A 86 786 134 HOH HOH . 
L 6 HOH A 87 787 132 HOH HOH . 
L 6 HOH A 88 788 73 HOH HOH . 
L 6 HOH A 89 789 83 HOH HOH . 
L 6 HOH A 90 790 46 HOH HOH . 
L 6 HOH A 91 791 129 HOH HOH . 
L 6 HOH A 92 792 103 HOH HOH . 
L 6 HOH A 93 793 94 HOH HOH . 
L 6 HOH A 94 794 54 HOH HOH . 
L 6 HOH A 95 795 130 HOH HOH . 
L 6 HOH A 96 796 45 HOH HOH . 
L 6 HOH A 97 797 24 HOH HOH . 
L 6 HOH A 98 798 8 HOH HOH . 
L 6 HOH A 99 799 136 HOH HOH . 
L 6 HOH A 100 800 88 HOH HOH . 
L 6 HOH A 101 801 51 HOH HOH . 
L 6 HOH A 102 802 98 HOH HOH . 
L 6 HOH A 103 803 96 HOH HOH . 
L 6 HOH A 104 804 137 HOH HOH . 
L 6 HOH A 105 805 135 HOH HOH . 
L 6 HOH A 106 806 143 HOH HOH . 
L 6 HOH A 107 807 34 HOH HOH . 
L 6 HOH A 108 808 122 HOH HOH . 
L 6 HOH A 109 809 95 HOH HOH . 
L 6 HOH A 110 810 141 HOH HOH . 
L 6 HOH A 111 811 93 HOH HOH . 
L 6 HOH A 112 812 48 HOH HOH . 
L 6 HOH A 113 813 74 HOH HOH . 
L 6 HOH A 114 814 59 HOH HOH . 
L 6 HOH A 115 815 120 HOH HOH . 
L 6 HOH A 116 816 119 HOH HOH . 
L 6 HOH A 117 817 58 HOH HOH . 
L 6 HOH A 118 818 124 HOH HOH . 
L 6 HOH A 119 819 121 HOH HOH . 
L 6 HOH A 120 820 123 HOH HOH . 
L 6 HOH A 121 821 127 HOH HOH . 
L 6 HOH A 122 822 113 HOH HOH . 
L 6 HOH A 123 823 108 HOH HOH . 
L 6 HOH A 124 824 44 HOH HOH . 
L 6 HOH A 125 825 67 HOH HOH . 
L 6 HOH A 126 826 105 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . K 5 -27.181 17.327 -9.871 1 61.29 ? C1 GOL 610 A 1 
HETATM 2 O O1 GOL . . . K 5 -27.075 17.623 -8.513 1 61.28 ? O1 GOL 610 A 1 
HETATM 3 C C2 GOL . . . K 5 -26.425 18.44 -10.635 1 61.12 ? C2 GOL 610 A 1 
HETATM 4 O O2 GOL . . . K 5 -25.114 18.574 -10.196 1 60.96 ? O2 GOL 610 A 1 
HETATM 5 C C3 GOL . . . K 5 -26.509 18.031 -12.129 1 60.98 ? C3 GOL 610 A 1 
HETATM 6 O O3 GOL . . . K 5 -27.821 18.262 -12.539 1 60.9 ? O3 GOL 610 A 1 
#
_model_server_stats.io_time_ms              99 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           277 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#