data_6BIL
#
_model_server_result.job_id            Ni7JFiS6kRiGJ1mv1LhvhQ 
_model_server_result.datetime_utc      '2024-10-20 07:59:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6bil 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":201}' 
#
_entry.id    6BIL 
#
_exptl.entry_id    6BIL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          4 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6BIL 
_cell.length_a            67.41 
_cell.length_b            184.12 
_cell.length_c            77.3 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6BIL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 107 A CYS 107 1_555 A SG CYS 163 A CYS 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf2 B SG CYS 17 B CYS 15 1_555 B SG CYS 81 B CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf3 B SG CYS 119 B CYS 117 1_555 B SG CYS 175 B CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
covale ? covale1 A ND2 ASN 78 A ASN 78 1_555 D C1 NAG . A NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.458 ? 
covale ? covale2 A ND2 ASN 118 A ASN 118 1_555 E C1 NAG . A NAG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? 
covale ? covale3 C C ALA 5 C ALA 5 1_555 C N CIR 6 C CIR 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale4 C C CIR 6 C CIR 6 1_555 C N PRO 7 C PRO 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 261 n n 
C1 O1 NAG sing 262 n n 
C1 O5 NAG sing 263 n n 
C1 H1 NAG sing 264 n n 
C2 C3 NAG sing 265 n n 
C2 N2 NAG sing 266 n n 
C2 H2 NAG sing 267 n n 
C3 C4 NAG sing 268 n n 
C3 O3 NAG sing 269 n n 
C3 H3 NAG sing 270 n n 
C4 C5 NAG sing 271 n n 
C4 O4 NAG sing 272 n n 
C4 H4 NAG sing 273 n n 
C5 C6 NAG sing 274 n n 
C5 O5 NAG sing 275 n n 
C5 H5 NAG sing 276 n n 
C6 O6 NAG sing 277 n n 
C6 H61 NAG sing 278 n n 
C6 H62 NAG sing 279 n n 
C7 C8 NAG sing 280 n n 
C7 N2 NAG sing 281 n n 
C7 O7 NAG doub 282 n n 
C8 H81 NAG sing 283 n n 
C8 H82 NAG sing 284 n n 
C8 H83 NAG sing 285 n n 
N2 HN2 NAG sing 286 n n 
O1 HO1 NAG sing 287 n n 
O3 HO3 NAG sing 288 n n 
O4 HO4 NAG sing 289 n n 
O6 HO6 NAG sing 290 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     6BIL 
_atom_sites.fract_transf_matrix[1][1]    0.014835 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005431 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012937 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 NAG A 1 201 1 NAG NAG . 
E 4 NAG A 1 202 2 NAG NAG . 
F 5 HOH A 1 301 150 HOH HOH . 
F 5 HOH A 2 302 34 HOH HOH . 
F 5 HOH A 3 303 129 HOH HOH . 
F 5 HOH A 4 304 14 HOH HOH . 
F 5 HOH A 5 305 132 HOH HOH . 
F 5 HOH A 6 306 117 HOH HOH . 
F 5 HOH A 7 307 33 HOH HOH . 
F 5 HOH A 8 308 93 HOH HOH . 
F 5 HOH A 9 309 133 HOH HOH . 
F 5 HOH A 10 310 41 HOH HOH . 
F 5 HOH A 11 311 61 HOH HOH . 
F 5 HOH A 12 312 100 HOH HOH . 
F 5 HOH A 13 313 134 HOH HOH . 
F 5 HOH A 14 314 37 HOH HOH . 
F 5 HOH A 15 315 7 HOH HOH . 
F 5 HOH A 16 316 40 HOH HOH . 
F 5 HOH A 17 317 31 HOH HOH . 
F 5 HOH A 18 318 98 HOH HOH . 
F 5 HOH A 19 319 146 HOH HOH . 
F 5 HOH A 20 320 43 HOH HOH . 
F 5 HOH A 21 321 103 HOH HOH . 
F 5 HOH A 22 322 106 HOH HOH . 
F 5 HOH A 23 323 82 HOH HOH . 
F 5 HOH A 24 324 141 HOH HOH . 
F 5 HOH A 25 325 142 HOH HOH . 
F 5 HOH A 26 326 111 HOH HOH . 
F 5 HOH A 27 327 20 HOH HOH . 
F 5 HOH A 28 328 49 HOH HOH . 
F 5 HOH A 29 329 80 HOH HOH . 
F 5 HOH A 30 330 15 HOH HOH . 
F 5 HOH A 31 331 85 HOH HOH . 
F 5 HOH A 32 332 71 HOH HOH . 
F 5 HOH A 33 333 102 HOH HOH . 
F 5 HOH A 34 334 35 HOH HOH . 
F 5 HOH A 35 335 127 HOH HOH . 
F 5 HOH A 36 336 65 HOH HOH . 
F 5 HOH A 37 337 36 HOH HOH . 
F 5 HOH A 38 338 8 HOH HOH . 
F 5 HOH A 39 339 136 HOH HOH . 
F 5 HOH A 40 340 152 HOH HOH . 
F 5 HOH A 41 341 128 HOH HOH . 
F 5 HOH A 42 342 13 HOH HOH . 
F 5 HOH A 43 343 78 HOH HOH . 
F 5 HOH A 44 344 137 HOH HOH . 
F 5 HOH A 45 345 67 HOH HOH . 
F 5 HOH A 46 346 143 HOH HOH . 
F 5 HOH A 47 347 38 HOH HOH . 
F 5 HOH A 48 348 149 HOH HOH . 
F 5 HOH A 49 349 60 HOH HOH . 
F 5 HOH A 50 350 77 HOH HOH . 
F 5 HOH A 51 351 69 HOH HOH . 
F 5 HOH A 52 352 105 HOH HOH . 
F 5 HOH A 53 353 46 HOH HOH . 
F 5 HOH A 54 354 53 HOH HOH . 
F 5 HOH A 55 355 10 HOH HOH . 
F 5 HOH A 56 356 58 HOH HOH . 
F 5 HOH A 57 357 56 HOH HOH . 
F 5 HOH A 58 358 11 HOH HOH . 
F 5 HOH A 59 359 101 HOH HOH . 
F 5 HOH A 60 360 45 HOH HOH . 
F 5 HOH A 61 361 116 HOH HOH . 
F 5 HOH A 62 362 55 HOH HOH . 
F 5 HOH A 63 363 99 HOH HOH . 
F 5 HOH A 64 364 86 HOH HOH . 
F 5 HOH A 65 365 21 HOH HOH . 
F 5 HOH A 66 366 54 HOH HOH . 
F 5 HOH A 67 367 9 HOH HOH . 
F 5 HOH A 68 368 113 HOH HOH . 
F 5 HOH A 69 369 109 HOH HOH . 
G 5 HOH B 1 201 120 HOH HOH . 
G 5 HOH B 2 202 26 HOH HOH . 
G 5 HOH B 3 203 51 HOH HOH . 
G 5 HOH B 4 204 57 HOH HOH . 
G 5 HOH B 5 205 144 HOH HOH . 
G 5 HOH B 6 206 138 HOH HOH . 
G 5 HOH B 7 207 73 HOH HOH . 
G 5 HOH B 8 208 147 HOH HOH . 
G 5 HOH B 9 209 108 HOH HOH . 
G 5 HOH B 10 210 87 HOH HOH . 
G 5 HOH B 11 211 24 HOH HOH . 
G 5 HOH B 12 212 12 HOH HOH . 
G 5 HOH B 13 213 88 HOH HOH . 
G 5 HOH B 14 214 19 HOH HOH . 
G 5 HOH B 15 215 68 HOH HOH . 
G 5 HOH B 16 216 25 HOH HOH . 
G 5 HOH B 17 217 94 HOH HOH . 
G 5 HOH B 18 218 1 HOH HOH . 
G 5 HOH B 19 219 27 HOH HOH . 
G 5 HOH B 20 220 130 HOH HOH . 
G 5 HOH B 21 221 145 HOH HOH . 
G 5 HOH B 22 222 151 HOH HOH . 
G 5 HOH B 23 223 75 HOH HOH . 
G 5 HOH B 24 224 22 HOH HOH . 
G 5 HOH B 25 225 140 HOH HOH . 
G 5 HOH B 26 226 97 HOH HOH . 
G 5 HOH B 27 227 18 HOH HOH . 
G 5 HOH B 28 228 3 HOH HOH . 
G 5 HOH B 29 229 89 HOH HOH . 
G 5 HOH B 30 230 114 HOH HOH . 
G 5 HOH B 31 231 4 HOH HOH . 
G 5 HOH B 32 232 2 HOH HOH . 
G 5 HOH B 33 233 119 HOH HOH . 
G 5 HOH B 34 234 47 HOH HOH . 
G 5 HOH B 35 235 5 HOH HOH . 
G 5 HOH B 36 236 135 HOH HOH . 
G 5 HOH B 37 237 59 HOH HOH . 
G 5 HOH B 38 238 139 HOH HOH . 
G 5 HOH B 39 239 29 HOH HOH . 
G 5 HOH B 40 240 118 HOH HOH . 
G 5 HOH B 41 241 92 HOH HOH . 
G 5 HOH B 42 242 115 HOH HOH . 
G 5 HOH B 43 243 74 HOH HOH . 
G 5 HOH B 44 244 112 HOH HOH . 
G 5 HOH B 45 245 81 HOH HOH . 
G 5 HOH B 46 246 107 HOH HOH . 
G 5 HOH B 47 247 62 HOH HOH . 
G 5 HOH B 48 248 83 HOH HOH . 
G 5 HOH B 49 249 95 HOH HOH . 
G 5 HOH B 50 250 64 HOH HOH . 
G 5 HOH B 51 251 131 HOH HOH . 
G 5 HOH B 52 252 84 HOH HOH . 
G 5 HOH B 53 253 148 HOH HOH . 
G 5 HOH B 54 254 50 HOH HOH . 
G 5 HOH B 55 255 124 HOH HOH . 
G 5 HOH B 56 256 90 HOH HOH . 
G 5 HOH B 57 257 66 HOH HOH . 
G 5 HOH B 58 258 23 HOH HOH . 
G 5 HOH B 59 259 32 HOH HOH . 
H 5 HOH C 1 101 122 HOH HOH . 
H 5 HOH C 2 102 79 HOH HOH . 
H 5 HOH C 3 103 125 HOH HOH . 
H 5 HOH C 4 104 44 HOH HOH . 
H 5 HOH C 5 105 42 HOH HOH . 
H 5 HOH C 6 106 52 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . D 4 49.22 49.319 -19.062 1 38.65 ? C1 NAG 201 A 1 
HETATM 2 C C2 NAG . . . D 4 48.812 48.415 -20.226 1 40.08 ? C2 NAG 201 A 1 
HETATM 3 C C3 NAG . . . D 4 49.989 48.216 -21.177 1 39.59 ? C3 NAG 201 A 1 
HETATM 4 C C4 NAG . . . D 4 50.536 49.562 -21.629 1 47.56 ? C4 NAG 201 A 1 
HETATM 5 C C5 NAG . . . D 4 50.88 50.422 -20.415 1 49.52 ? C5 NAG 201 A 1 
HETATM 6 C C6 NAG . . . D 4 51.321 51.819 -20.787 1 48.46 ? C6 NAG 201 A 1 
HETATM 7 C C7 NAG . . . D 4 47.033 46.914 -19.451 1 38.25 ? C7 NAG 201 A 1 
HETATM 8 C C8 NAG . . . D 4 46.696 45.533 -18.977 1 32.58 ? C8 NAG 201 A 1 
HETATM 9 N N2 NAG . . . D 4 48.317 47.134 -19.749 1 45.96 ? N2 NAG 201 A 1 
HETATM 10 O O3 NAG . . . D 4 49.563 47.458 -22.303 1 48.79 ? O3 NAG 201 A 1 
HETATM 11 O O4 NAG . . . D 4 51.702 49.376 -22.424 1 50.36 ? O4 NAG 201 A 1 
HETATM 12 O O5 NAG . . . D 4 49.727 50.562 -19.571 1 42.53 ? O5 NAG 201 A 1 
HETATM 13 O O6 NAG . . . D 4 50.362 52.465 -21.613 1 54.17 ? O6 NAG 201 A 1 
HETATM 14 O O7 NAG . . . D 4 46.182 47.792 -19.556 1 39.3 ? O7 NAG 201 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           258 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           14 
#