data_6BJM # _model_server_result.job_id R2W462_PhUaZzxtzL2p4rQ _model_server_result.datetime_utc '2024-11-27 00:37:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6bjm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6BJM # _exptl.entry_id 6BJM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6BJM _cell.length_a 52.67 _cell.length_b 149.67 _cell.length_c 79.18 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BJM _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C 1 1 A,B,C 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 52.67 0 39.59 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 6BJM _atom_sites.fract_transf_matrix[1][1] 0.018986 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006681 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012629 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 401 1 GOL GOL . C 3 HOH A 1 501 170 HOH HOH . C 3 HOH A 2 502 173 HOH HOH . C 3 HOH A 3 503 16 HOH HOH . C 3 HOH A 4 504 94 HOH HOH . C 3 HOH A 5 505 195 HOH HOH . C 3 HOH A 6 506 186 HOH HOH . C 3 HOH A 7 507 136 HOH HOH . C 3 HOH A 8 508 65 HOH HOH . C 3 HOH A 9 509 139 HOH HOH . C 3 HOH A 10 510 6 HOH HOH . C 3 HOH A 11 511 24 HOH HOH . C 3 HOH A 12 512 130 HOH HOH . C 3 HOH A 13 513 113 HOH HOH . C 3 HOH A 14 514 168 HOH HOH . C 3 HOH A 15 515 190 HOH HOH . C 3 HOH A 16 516 106 HOH HOH . C 3 HOH A 17 517 225 HOH HOH . C 3 HOH A 18 518 222 HOH HOH . C 3 HOH A 19 519 85 HOH HOH . C 3 HOH A 20 520 103 HOH HOH . C 3 HOH A 21 521 27 HOH HOH . C 3 HOH A 22 522 118 HOH HOH . C 3 HOH A 23 523 129 HOH HOH . C 3 HOH A 24 524 125 HOH HOH . C 3 HOH A 25 525 160 HOH HOH . C 3 HOH A 26 526 97 HOH HOH . C 3 HOH A 27 527 161 HOH HOH . C 3 HOH A 28 528 143 HOH HOH . C 3 HOH A 29 529 15 HOH HOH . C 3 HOH A 30 530 41 HOH HOH . C 3 HOH A 31 531 122 HOH HOH . C 3 HOH A 32 532 100 HOH HOH . C 3 HOH A 33 533 175 HOH HOH . C 3 HOH A 34 534 45 HOH HOH . C 3 HOH A 35 535 35 HOH HOH . C 3 HOH A 36 536 34 HOH HOH . C 3 HOH A 37 537 56 HOH HOH . C 3 HOH A 38 538 114 HOH HOH . C 3 HOH A 39 539 258 HOH HOH . C 3 HOH A 40 540 20 HOH HOH . C 3 HOH A 41 541 164 HOH HOH . C 3 HOH A 42 542 184 HOH HOH . C 3 HOH A 43 543 11 HOH HOH . C 3 HOH A 44 544 22 HOH HOH . C 3 HOH A 45 545 2 HOH HOH . C 3 HOH A 46 546 149 HOH HOH . C 3 HOH A 47 547 140 HOH HOH . C 3 HOH A 48 548 223 HOH HOH . C 3 HOH A 49 549 33 HOH HOH . C 3 HOH A 50 550 128 HOH HOH . C 3 HOH A 51 551 53 HOH HOH . C 3 HOH A 52 552 82 HOH HOH . C 3 HOH A 53 553 214 HOH HOH . C 3 HOH A 54 554 148 HOH HOH . C 3 HOH A 55 555 48 HOH HOH . C 3 HOH A 56 556 96 HOH HOH . C 3 HOH A 57 557 59 HOH HOH . C 3 HOH A 58 558 73 HOH HOH . C 3 HOH A 59 559 216 HOH HOH . C 3 HOH A 60 560 51 HOH HOH . C 3 HOH A 61 561 72 HOH HOH . C 3 HOH A 62 562 1 HOH HOH . C 3 HOH A 63 563 46 HOH HOH . C 3 HOH A 64 564 134 HOH HOH . C 3 HOH A 65 565 37 HOH HOH . C 3 HOH A 66 566 78 HOH HOH . C 3 HOH A 67 567 14 HOH HOH . C 3 HOH A 68 568 236 HOH HOH . C 3 HOH A 69 569 23 HOH HOH . C 3 HOH A 70 570 120 HOH HOH . C 3 HOH A 71 571 36 HOH HOH . C 3 HOH A 72 572 182 HOH HOH . C 3 HOH A 73 573 26 HOH HOH . C 3 HOH A 74 574 191 HOH HOH . C 3 HOH A 75 575 119 HOH HOH . C 3 HOH A 76 576 90 HOH HOH . C 3 HOH A 77 577 123 HOH HOH . C 3 HOH A 78 578 145 HOH HOH . C 3 HOH A 79 579 217 HOH HOH . C 3 HOH A 80 580 66 HOH HOH . C 3 HOH A 81 581 124 HOH HOH . C 3 HOH A 82 582 159 HOH HOH . C 3 HOH A 83 583 141 HOH HOH . C 3 HOH A 84 584 3 HOH HOH . C 3 HOH A 85 585 30 HOH HOH . C 3 HOH A 86 586 98 HOH HOH . C 3 HOH A 87 587 179 HOH HOH . C 3 HOH A 88 588 79 HOH HOH . C 3 HOH A 89 589 52 HOH HOH . C 3 HOH A 90 590 232 HOH HOH . C 3 HOH A 91 591 157 HOH HOH . C 3 HOH A 92 592 13 HOH HOH . C 3 HOH A 93 593 116 HOH HOH . C 3 HOH A 94 594 62 HOH HOH . C 3 HOH A 95 595 194 HOH HOH . C 3 HOH A 96 596 180 HOH HOH . C 3 HOH A 97 597 7 HOH HOH . C 3 HOH A 98 598 127 HOH HOH . C 3 HOH A 99 599 42 HOH HOH . C 3 HOH A 100 600 10 HOH HOH . C 3 HOH A 101 601 213 HOH HOH . C 3 HOH A 102 602 18 HOH HOH . C 3 HOH A 103 603 88 HOH HOH . C 3 HOH A 104 604 70 HOH HOH . C 3 HOH A 105 605 49 HOH HOH . C 3 HOH A 106 606 144 HOH HOH . C 3 HOH A 107 607 9 HOH HOH . C 3 HOH A 108 608 4 HOH HOH . C 3 HOH A 109 609 187 HOH HOH . C 3 HOH A 110 610 40 HOH HOH . C 3 HOH A 111 611 25 HOH HOH . C 3 HOH A 112 612 112 HOH HOH . C 3 HOH A 113 613 63 HOH HOH . C 3 HOH A 114 614 234 HOH HOH . C 3 HOH A 115 615 183 HOH HOH . C 3 HOH A 116 616 5 HOH HOH . C 3 HOH A 117 617 17 HOH HOH . C 3 HOH A 118 618 64 HOH HOH . C 3 HOH A 119 619 132 HOH HOH . C 3 HOH A 120 620 102 HOH HOH . C 3 HOH A 121 621 201 HOH HOH . C 3 HOH A 122 622 39 HOH HOH . C 3 HOH A 123 623 87 HOH HOH . C 3 HOH A 124 624 117 HOH HOH . C 3 HOH A 125 625 138 HOH HOH . C 3 HOH A 126 626 147 HOH HOH . C 3 HOH A 127 627 71 HOH HOH . C 3 HOH A 128 628 121 HOH HOH . C 3 HOH A 129 629 153 HOH HOH . C 3 HOH A 130 630 55 HOH HOH . C 3 HOH A 131 631 38 HOH HOH . C 3 HOH A 132 632 247 HOH HOH . C 3 HOH A 133 633 12 HOH HOH . C 3 HOH A 134 634 28 HOH HOH . C 3 HOH A 135 635 111 HOH HOH . C 3 HOH A 136 636 19 HOH HOH . C 3 HOH A 137 637 108 HOH HOH . C 3 HOH A 138 638 8 HOH HOH . C 3 HOH A 139 639 240 HOH HOH . C 3 HOH A 140 640 155 HOH HOH . C 3 HOH A 141 641 152 HOH HOH . C 3 HOH A 142 642 133 HOH HOH . C 3 HOH A 143 643 86 HOH HOH . C 3 HOH A 144 644 185 HOH HOH . C 3 HOH A 145 645 172 HOH HOH . C 3 HOH A 146 646 212 HOH HOH . C 3 HOH A 147 647 44 HOH HOH . C 3 HOH A 148 648 93 HOH HOH . C 3 HOH A 149 649 126 HOH HOH . C 3 HOH A 150 650 83 HOH HOH . C 3 HOH A 151 651 189 HOH HOH . C 3 HOH A 152 652 80 HOH HOH . C 3 HOH A 153 653 84 HOH HOH . C 3 HOH A 154 654 75 HOH HOH . C 3 HOH A 155 655 115 HOH HOH . C 3 HOH A 156 656 188 HOH HOH . C 3 HOH A 157 657 89 HOH HOH . C 3 HOH A 158 658 95 HOH HOH . C 3 HOH A 159 659 58 HOH HOH . C 3 HOH A 160 660 104 HOH HOH . C 3 HOH A 161 661 54 HOH HOH . C 3 HOH A 162 662 205 HOH HOH . C 3 HOH A 163 663 110 HOH HOH . C 3 HOH A 164 664 21 HOH HOH . C 3 HOH A 165 665 248 HOH HOH . C 3 HOH A 166 666 211 HOH HOH . C 3 HOH A 167 667 47 HOH HOH . C 3 HOH A 168 668 163 HOH HOH . C 3 HOH A 169 669 57 HOH HOH . C 3 HOH A 170 670 76 HOH HOH . C 3 HOH A 171 671 218 HOH HOH . C 3 HOH A 172 672 32 HOH HOH . C 3 HOH A 173 673 91 HOH HOH . C 3 HOH A 174 674 50 HOH HOH . C 3 HOH A 175 675 29 HOH HOH . C 3 HOH A 176 676 196 HOH HOH . C 3 HOH A 177 677 60 HOH HOH . C 3 HOH A 178 678 142 HOH HOH . C 3 HOH A 179 679 150 HOH HOH . C 3 HOH A 180 680 81 HOH HOH . C 3 HOH A 181 681 107 HOH HOH . C 3 HOH A 182 682 74 HOH HOH . C 3 HOH A 183 683 131 HOH HOH . C 3 HOH A 184 684 181 HOH HOH . C 3 HOH A 185 685 154 HOH HOH . C 3 HOH A 186 686 151 HOH HOH . C 3 HOH A 187 687 109 HOH HOH . C 3 HOH A 188 688 210 HOH HOH . C 3 HOH A 189 689 177 HOH HOH . C 3 HOH A 190 690 165 HOH HOH . C 3 HOH A 191 691 101 HOH HOH . C 3 HOH A 192 692 174 HOH HOH . C 3 HOH A 193 693 92 HOH HOH . C 3 HOH A 194 694 105 HOH HOH . C 3 HOH A 195 695 178 HOH HOH . C 3 HOH A 196 696 68 HOH HOH . C 3 HOH A 197 697 169 HOH HOH . C 3 HOH A 198 698 176 HOH HOH . C 3 HOH A 199 699 158 HOH HOH . C 3 HOH A 200 700 272 HOH HOH . C 3 HOH A 201 701 246 HOH HOH . C 3 HOH A 202 702 249 HOH HOH . C 3 HOH A 203 703 77 HOH HOH . C 3 HOH A 204 704 156 HOH HOH . C 3 HOH A 205 705 242 HOH HOH . C 3 HOH A 206 706 206 HOH HOH . C 3 HOH A 207 707 146 HOH HOH . C 3 HOH A 208 708 199 HOH HOH . C 3 HOH A 209 709 137 HOH HOH . C 3 HOH A 210 710 257 HOH HOH . C 3 HOH A 211 711 233 HOH HOH . C 3 HOH A 212 712 43 HOH HOH . C 3 HOH A 213 713 200 HOH HOH . C 3 HOH A 214 714 99 HOH HOH . C 3 HOH A 215 715 230 HOH HOH . C 3 HOH A 216 716 209 HOH HOH . C 3 HOH A 217 717 31 HOH HOH . C 3 HOH A 218 718 162 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 19.123 61.087 45.825 1 28.53 ? C1 GOL 401 A 1 HETATM 2 O O1 GOL . . . B 2 18.901 60.646 44.51 1 28.84 ? O1 GOL 401 A 1 HETATM 3 C C2 GOL . . . B 2 19.916 62.336 45.508 1 32.51 ? C2 GOL 401 A 1 HETATM 4 O O2 GOL . . . B 2 19.097 63.455 45.832 1 29.45 ? O2 GOL 401 A 1 HETATM 5 C C3 GOL . . . B 2 21.292 62.278 46.119 1 28.88 ? C3 GOL 401 A 1 HETATM 6 O O3 GOL . . . B 2 21.859 63.535 46.403 1 26.51 ? O3 GOL 401 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #