data_6BKL # _model_server_result.job_id XP3019SIkBYkN6fXkZm7Tg _model_server_result.datetime_utc '2024-11-04 22:40:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6bkl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":101}' # _entry.id 6BKL # _exptl.entry_id 6BKL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 179.302 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1S)-1-[(3R,5R,7R)-tricyclo[3.3.1.1~3,7~]decan-1-yl]ethan-1-amine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.76 _cell.angle_gamma 90 _cell.entry_id 6BKL _cell.length_a 36.46 _cell.length_b 47.84 _cell.length_c 48.53 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BKL _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,I,J,M,N,O,P 1 1 E,F,G,H,K,L,Q,R,S,T 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 I N N ? 2 L N N # _chem_comp.formula 'C12 H21 N' _chem_comp.formula_weight 179.302 _chem_comp.id EU7 _chem_comp.mon_nstd_flag . _chem_comp.name (1S)-1-[(3R,5R,7R)-tricyclo[3.3.1.1~3,7~]decan-1-yl]ethan-1-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms S-RIMANTADINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CA CB EU7 sing 60 n n CB NC EU7 sing 61 n n CB CD EU7 sing 62 n n CD CE1 EU7 sing 63 n n CD CE2 EU7 sing 64 n n CD CE3 EU7 sing 65 n n CE1 CF1 EU7 sing 66 n n CE2 CF2 EU7 sing 67 n n CE3 CF3 EU7 sing 68 n n CF1 CG1 EU7 sing 69 n n CF1 CG3 EU7 sing 70 n n CF2 CG1 EU7 sing 71 n n CF2 CG2 EU7 sing 72 n n CF3 CG2 EU7 sing 73 n n CF3 CG3 EU7 sing 74 n n CA HA3 EU7 sing 75 n n CA HA2 EU7 sing 76 n n CA HA1 EU7 sing 77 n n CB HB EU7 sing 78 n n NC HNC2 EU7 sing 79 n n NC HNC3 EU7 sing 80 n n CE1 HE12 EU7 sing 81 n n CE1 HE11 EU7 sing 82 n n CE2 HE22 EU7 sing 83 n n CE2 HE21 EU7 sing 84 n n CE3 HE32 EU7 sing 85 n n CE3 HE31 EU7 sing 86 n n CF1 HF1 EU7 sing 87 n n CF2 HF2 EU7 sing 88 n n CF3 HF3 EU7 sing 89 n n CG1 HG12 EU7 sing 90 n n CG1 HG11 EU7 sing 91 n n CG2 HG22 EU7 sing 92 n n CG2 HG21 EU7 sing 93 n n CG3 HG32 EU7 sing 94 n n CG3 HG31 EU7 sing 95 n n # _atom_sites.entry_id 6BKL _atom_sites.fract_transf_matrix[1][1] 0.027427 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003251 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020903 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02075 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 EU7 C 1 101 1 EU7 EU7 . J 3 RIM D 1 101 1 RIM RIM . K 3 RIM F 1 101 1 RIM RIM . L 2 EU7 G 1 101 1 EU7 EU7 . M 4 HOH A 1 101 5 HOH HOH . M 4 HOH A 2 102 32 HOH HOH . M 4 HOH A 3 103 9 HOH HOH . N 4 HOH B 1 101 4 HOH HOH . N 4 HOH B 2 102 23 HOH HOH . N 4 HOH B 3 103 24 HOH HOH . O 4 HOH C 1 201 19 HOH HOH . O 4 HOH C 2 202 3 HOH HOH . O 4 HOH C 3 203 25 HOH HOH . O 4 HOH C 4 204 2 HOH HOH . O 4 HOH C 5 205 21 HOH HOH . O 4 HOH C 6 206 8 HOH HOH . O 4 HOH C 7 207 7 HOH HOH . O 4 HOH C 8 208 34 HOH HOH . P 4 HOH D 1 201 6 HOH HOH . P 4 HOH D 2 202 22 HOH HOH . P 4 HOH D 3 203 1 HOH HOH . Q 4 HOH E 1 101 14 HOH HOH . Q 4 HOH E 2 102 31 HOH HOH . R 4 HOH F 1 201 10 HOH HOH . R 4 HOH F 2 202 13 HOH HOH . R 4 HOH F 3 203 29 HOH HOH . R 4 HOH F 4 204 18 HOH HOH . S 4 HOH G 1 201 11 HOH HOH . S 4 HOH G 2 202 12 HOH HOH . S 4 HOH G 3 203 27 HOH HOH . S 4 HOH G 4 204 33 HOH HOH . S 4 HOH G 5 205 16 HOH HOH . T 4 HOH H 1 101 30 HOH HOH . T 4 HOH H 2 102 17 HOH HOH . T 4 HOH H 3 103 15 HOH HOH . T 4 HOH H 4 104 26 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CA EU7 . B . L 2 -1.727 -4.898 47.891 0.5 26.18 ? CA EU7 101 G 1 HETATM 2 C CB EU7 . B . L 2 -1.529 -3.523 47.25 0.5 26.41 ? CB EU7 101 G 1 HETATM 3 N NC EU7 . B . L 2 -2.21 -3.486 45.948 0.5 27.72 ? NC EU7 101 G 1 HETATM 4 C CD EU7 . B . L 2 -0.034 -3.263 47.05 0.5 27.45 ? CD EU7 101 G 1 HETATM 5 C CE1 EU7 . B . L 2 0.675 -3.302 48.405 0.5 28.19 ? CE1 EU7 101 G 1 HETATM 6 C CE2 EU7 . B . L 2 0.553 -4.342 46.138 0.5 27.28 ? CE2 EU7 101 G 1 HETATM 7 C CE3 EU7 . B . L 2 0.163 -1.888 46.409 0.5 29.91 ? CE3 EU7 101 G 1 HETATM 8 C CF1 EU7 . B . L 2 2.17 -3.043 48.206 0.5 25.71 ? CF1 EU7 101 G 1 HETATM 9 C CF2 EU7 . B . L 2 2.047 -4.082 45.939 0.5 24.83 ? CF2 EU7 101 G 1 HETATM 10 C CF3 EU7 . B . L 2 1.659 -1.63 46.21 0.5 25.97 ? CF3 EU7 101 G 1 HETATM 11 C CG1 EU7 . B . L 2 2.758 -4.121 47.294 0.5 21.37 ? CG1 EU7 101 G 1 HETATM 12 C CG2 EU7 . B . L 2 2.245 -2.707 45.298 0.5 28.05 ? CG2 EU7 101 G 1 HETATM 13 C CG3 EU7 . B . L 2 2.368 -1.667 47.566 0.5 25.77 ? CG3 EU7 101 G 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 13 #