data_6BLN # _model_server_result.job_id HAFA4YtYoFpboeJ9hPnyqA _model_server_result.datetime_utc '2024-11-18 02:26:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6bln # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":705}' # _entry.id 6BLN # _exptl.entry_id 6BLN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6BLN _cell.length_a 107.823 _cell.length_b 107.823 _cell.length_c 41.866 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BLN _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 89 A GLY 480 1_555 A N OCS 90 A OCS 481 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 A C OCS 90 A OCS 481 1_555 A N LEU 91 A LEU 482 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # _atom_sites.entry_id 6BLN _atom_sites.fract_transf_matrix[1][1] 0.009274 _atom_sites.fract_transf_matrix[1][2] 0.005355 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010709 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023886 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 701 1 SO4 SO4 . C 2 SO4 A 1 702 2 SO4 SO4 . D 2 SO4 A 1 703 3 SO4 SO4 . E 3 DY4 A 1 704 1 DY4 XXX . F 4 GOL A 1 705 1 GOL GOL . G 5 HOH A 1 801 113 HOH HOH . G 5 HOH A 2 802 142 HOH HOH . G 5 HOH A 3 803 129 HOH HOH . G 5 HOH A 4 804 29 HOH HOH . G 5 HOH A 5 805 194 HOH HOH . G 5 HOH A 6 806 140 HOH HOH . G 5 HOH A 7 807 33 HOH HOH . G 5 HOH A 8 808 115 HOH HOH . G 5 HOH A 9 809 31 HOH HOH . G 5 HOH A 10 810 44 HOH HOH . G 5 HOH A 11 811 62 HOH HOH . G 5 HOH A 12 812 79 HOH HOH . G 5 HOH A 13 813 138 HOH HOH . G 5 HOH A 14 814 28 HOH HOH . G 5 HOH A 15 815 182 HOH HOH . G 5 HOH A 16 816 75 HOH HOH . G 5 HOH A 17 817 52 HOH HOH . G 5 HOH A 18 818 81 HOH HOH . G 5 HOH A 19 819 99 HOH HOH . G 5 HOH A 20 820 84 HOH HOH . G 5 HOH A 21 821 94 HOH HOH . G 5 HOH A 22 822 90 HOH HOH . G 5 HOH A 23 823 104 HOH HOH . G 5 HOH A 24 824 175 HOH HOH . G 5 HOH A 25 825 56 HOH HOH . G 5 HOH A 26 826 5 HOH HOH . G 5 HOH A 27 827 112 HOH HOH . G 5 HOH A 28 828 111 HOH HOH . G 5 HOH A 29 829 74 HOH HOH . G 5 HOH A 30 830 29 HOH HOH . G 5 HOH A 31 831 161 HOH HOH . G 5 HOH A 32 832 147 HOH HOH . G 5 HOH A 33 833 47 HOH HOH . G 5 HOH A 34 834 174 HOH HOH . G 5 HOH A 35 835 186 HOH HOH . G 5 HOH A 36 836 107 HOH HOH . G 5 HOH A 37 837 59 HOH HOH . G 5 HOH A 38 838 23 HOH HOH . G 5 HOH A 39 839 27 HOH HOH . G 5 HOH A 40 840 205 HOH HOH . G 5 HOH A 41 841 162 HOH HOH . G 5 HOH A 42 842 22 HOH HOH . G 5 HOH A 43 843 76 HOH HOH . G 5 HOH A 44 844 4 HOH HOH . G 5 HOH A 45 845 24 HOH HOH . G 5 HOH A 46 846 12 HOH HOH . G 5 HOH A 47 847 9 HOH HOH . G 5 HOH A 48 848 97 HOH HOH . G 5 HOH A 49 849 190 HOH HOH . G 5 HOH A 50 850 170 HOH HOH . G 5 HOH A 51 851 57 HOH HOH . G 5 HOH A 52 852 93 HOH HOH . G 5 HOH A 53 853 144 HOH HOH . G 5 HOH A 54 854 26 HOH HOH . G 5 HOH A 55 855 213 HOH HOH . G 5 HOH A 56 856 65 HOH HOH . G 5 HOH A 57 857 6 HOH HOH . G 5 HOH A 58 858 202 HOH HOH . G 5 HOH A 59 859 30 HOH HOH . G 5 HOH A 60 860 2 HOH HOH . G 5 HOH A 61 861 25 HOH HOH . G 5 HOH A 62 862 87 HOH HOH . G 5 HOH A 63 863 38 HOH HOH . G 5 HOH A 64 864 18 HOH HOH . G 5 HOH A 65 865 42 HOH HOH . G 5 HOH A 66 866 80 HOH HOH . G 5 HOH A 67 867 7 HOH HOH . G 5 HOH A 68 868 106 HOH HOH . G 5 HOH A 69 869 53 HOH HOH . G 5 HOH A 70 870 11 HOH HOH . G 5 HOH A 71 871 102 HOH HOH . G 5 HOH A 72 872 41 HOH HOH . G 5 HOH A 73 873 46 HOH HOH . G 5 HOH A 74 874 71 HOH HOH . G 5 HOH A 75 875 25 HOH HOH . G 5 HOH A 76 876 27 HOH HOH . G 5 HOH A 77 877 7 HOH HOH . G 5 HOH A 78 878 126 HOH HOH . G 5 HOH A 79 879 40 HOH HOH . G 5 HOH A 80 880 125 HOH HOH . G 5 HOH A 81 881 43 HOH HOH . G 5 HOH A 82 882 128 HOH HOH . G 5 HOH A 83 883 17 HOH HOH . G 5 HOH A 84 884 207 HOH HOH . G 5 HOH A 85 885 70 HOH HOH . G 5 HOH A 86 886 58 HOH HOH . G 5 HOH A 87 887 21 HOH HOH . G 5 HOH A 88 888 83 HOH HOH . G 5 HOH A 89 889 49 HOH HOH . G 5 HOH A 90 890 66 HOH HOH . G 5 HOH A 91 891 8 HOH HOH . G 5 HOH A 92 892 36 HOH HOH . G 5 HOH A 93 893 192 HOH HOH . G 5 HOH A 94 894 163 HOH HOH . G 5 HOH A 95 895 72 HOH HOH . G 5 HOH A 96 896 35 HOH HOH . G 5 HOH A 97 897 122 HOH HOH . G 5 HOH A 98 898 39 HOH HOH . G 5 HOH A 99 899 123 HOH HOH . G 5 HOH A 100 900 54 HOH HOH . G 5 HOH A 101 901 8 HOH HOH . G 5 HOH A 102 902 22 HOH HOH . G 5 HOH A 103 903 108 HOH HOH . G 5 HOH A 104 904 48 HOH HOH . G 5 HOH A 105 905 77 HOH HOH . G 5 HOH A 106 906 137 HOH HOH . G 5 HOH A 107 907 19 HOH HOH . G 5 HOH A 108 908 61 HOH HOH . G 5 HOH A 109 909 96 HOH HOH . G 5 HOH A 110 910 10 HOH HOH . G 5 HOH A 111 911 132 HOH HOH . G 5 HOH A 112 912 157 HOH HOH . G 5 HOH A 113 913 116 HOH HOH . G 5 HOH A 114 914 204 HOH HOH . G 5 HOH A 115 915 164 HOH HOH . G 5 HOH A 116 916 101 HOH HOH . G 5 HOH A 117 917 34 HOH HOH . G 5 HOH A 118 918 14 HOH HOH . G 5 HOH A 119 919 88 HOH HOH . G 5 HOH A 120 920 40 HOH HOH . G 5 HOH A 121 921 86 HOH HOH . G 5 HOH A 122 922 82 HOH HOH . G 5 HOH A 123 923 118 HOH HOH . G 5 HOH A 124 924 63 HOH HOH . G 5 HOH A 125 925 3 HOH HOH . G 5 HOH A 126 926 69 HOH HOH . G 5 HOH A 127 927 46 HOH HOH . G 5 HOH A 128 928 178 HOH HOH . G 5 HOH A 129 929 67 HOH HOH . G 5 HOH A 130 930 35 HOH HOH . G 5 HOH A 131 931 134 HOH HOH . G 5 HOH A 132 932 117 HOH HOH . G 5 HOH A 133 933 51 HOH HOH . G 5 HOH A 134 934 20 HOH HOH . G 5 HOH A 135 935 15 HOH HOH . G 5 HOH A 136 936 32 HOH HOH . G 5 HOH A 137 937 181 HOH HOH . G 5 HOH A 138 938 124 HOH HOH . G 5 HOH A 139 939 154 HOH HOH . G 5 HOH A 140 940 141 HOH HOH . G 5 HOH A 141 941 100 HOH HOH . G 5 HOH A 142 942 73 HOH HOH . G 5 HOH A 143 943 39 HOH HOH . G 5 HOH A 144 944 16 HOH HOH . G 5 HOH A 145 945 55 HOH HOH . G 5 HOH A 146 946 13 HOH HOH . G 5 HOH A 147 947 133 HOH HOH . G 5 HOH A 148 948 109 HOH HOH . G 5 HOH A 149 949 98 HOH HOH . G 5 HOH A 150 950 78 HOH HOH . G 5 HOH A 151 951 85 HOH HOH . G 5 HOH A 152 952 212 HOH HOH . G 5 HOH A 153 953 64 HOH HOH . G 5 HOH A 154 954 198 HOH HOH . G 5 HOH A 155 955 105 HOH HOH . G 5 HOH A 156 956 197 HOH HOH . G 5 HOH A 157 957 193 HOH HOH . G 5 HOH A 158 958 68 HOH HOH . G 5 HOH A 159 959 95 HOH HOH . G 5 HOH A 160 960 114 HOH HOH . G 5 HOH A 161 961 185 HOH HOH . G 5 HOH A 162 962 130 HOH HOH . G 5 HOH A 163 963 41 HOH HOH . G 5 HOH A 164 964 148 HOH HOH . G 5 HOH A 165 965 16 HOH HOH . G 5 HOH A 166 966 45 HOH HOH . G 5 HOH A 167 967 13 HOH HOH . G 5 HOH A 168 968 215 HOH HOH . G 5 HOH A 169 969 143 HOH HOH . G 5 HOH A 170 970 10 HOH HOH . G 5 HOH A 171 971 189 HOH HOH . G 5 HOH A 172 972 91 HOH HOH . G 5 HOH A 173 973 37 HOH HOH . G 5 HOH A 174 974 24 HOH HOH . G 5 HOH A 175 975 184 HOH HOH . G 5 HOH A 176 976 146 HOH HOH . G 5 HOH A 177 977 43 HOH HOH . G 5 HOH A 178 978 42 HOH HOH . G 5 HOH A 179 979 159 HOH HOH . G 5 HOH A 180 980 180 HOH HOH . G 5 HOH A 181 981 119 HOH HOH . G 5 HOH A 182 982 183 HOH HOH . G 5 HOH A 183 983 89 HOH HOH . G 5 HOH A 184 984 4 HOH HOH . G 5 HOH A 185 985 196 HOH HOH . G 5 HOH A 186 986 14 HOH HOH . G 5 HOH A 187 987 216 HOH HOH . G 5 HOH A 188 988 33 HOH HOH . G 5 HOH A 189 989 145 HOH HOH . G 5 HOH A 190 990 103 HOH HOH . G 5 HOH A 191 991 23 HOH HOH . G 5 HOH A 192 992 168 HOH HOH . G 5 HOH A 193 993 135 HOH HOH . G 5 HOH A 194 994 44 HOH HOH . G 5 HOH A 195 995 110 HOH HOH . G 5 HOH A 196 996 158 HOH HOH . G 5 HOH A 197 997 200 HOH HOH . G 5 HOH A 198 998 131 HOH HOH . G 5 HOH A 199 999 195 HOH HOH . G 5 HOH A 200 1000 45 HOH HOH . G 5 HOH A 201 1001 37 HOH HOH . G 5 HOH A 202 1002 169 HOH HOH . G 5 HOH A 203 1003 15 HOH HOH . G 5 HOH A 204 1004 191 HOH HOH . G 5 HOH A 205 1005 209 HOH HOH . G 5 HOH A 206 1006 11 HOH HOH . G 5 HOH A 207 1007 17 HOH HOH . G 5 HOH A 208 1008 156 HOH HOH . G 5 HOH A 209 1009 5 HOH HOH . G 5 HOH A 210 1010 199 HOH HOH . G 5 HOH A 211 1011 18 HOH HOH . G 5 HOH A 212 1012 176 HOH HOH . G 5 HOH A 213 1013 173 HOH HOH . G 5 HOH A 214 1014 34 HOH HOH . G 5 HOH A 215 1015 166 HOH HOH . G 5 HOH A 216 1016 12 HOH HOH . G 5 HOH A 217 1017 167 HOH HOH . G 5 HOH A 218 1018 30 HOH HOH . G 5 HOH A 219 1019 1 HOH HOH . G 5 HOH A 220 1020 9 HOH HOH . G 5 HOH A 221 1021 26 HOH HOH . G 5 HOH A 222 1022 28 HOH HOH . G 5 HOH A 223 1023 151 HOH HOH . G 5 HOH A 224 1024 179 HOH HOH . G 5 HOH A 225 1025 31 HOH HOH . G 5 HOH A 226 1026 187 HOH HOH . G 5 HOH A 227 1027 152 HOH HOH . G 5 HOH A 228 1028 171 HOH HOH . G 5 HOH A 229 1029 177 HOH HOH . G 5 HOH A 230 1030 160 HOH HOH . G 5 HOH A 231 1031 172 HOH HOH . G 5 HOH A 232 1032 38 HOH HOH . G 5 HOH A 233 1033 153 HOH HOH . G 5 HOH A 234 1034 155 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . F 4 14.187 -21.836 -6.397 1 37.09 ? C1 GOL 705 A 1 HETATM 2 O O1 GOL . . . F 4 13.732 -20.644 -6.998 1 63.22 ? O1 GOL 705 A 1 HETATM 3 C C2 GOL . . . F 4 15.702 -21.774 -6.203 1 37.7 ? C2 GOL 705 A 1 HETATM 4 O O2 GOL . . . F 4 16.253 -20.809 -7.072 1 63.53 ? O2 GOL 705 A 1 HETATM 5 C C3 GOL . . . F 4 16.053 -21.428 -4.761 1 40.29 ? C3 GOL 705 A 1 HETATM 6 O O3 GOL . . . F 4 17.239 -20.667 -4.709 1 55.97 ? O3 GOL 705 A 1 HETATM 7 H H11 GOL . . . F 4 13.932 -22.687 -7.03 1 44.5 ? H11 GOL 705 A 1 HETATM 8 H H12 GOL . . . F 4 13.697 -21.972 -5.433 1 44.5 ? H12 GOL 705 A 1 HETATM 9 H HO1 GOL . . . F 4 12.772 -20.715 -7.181 1 75.87 ? HO1 GOL 705 A 1 HETATM 10 H H2 GOL . . . F 4 16.12 -22.754 -6.433 1 45.24 ? H2 GOL 705 A 1 HETATM 11 H HO2 GOL . . . F 4 15.898 -19.924 -6.845 1 76.24 ? HO2 GOL 705 A 1 HETATM 12 H H31 GOL . . . F 4 16.182 -22.345 -4.186 1 48.35 ? H31 GOL 705 A 1 HETATM 13 H H32 GOL . . . F 4 15.237 -20.862 -4.312 1 48.35 ? H32 GOL 705 A 1 HETATM 14 H HO3 GOL . . . F 4 17.075 -19.84 -4.209 1 67.17 ? HO3 GOL 705 A 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 50 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 1351 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 14 #