data_6BM7
#
_model_server_result.job_id            0b_b7XiwcLhYur8kYyPlRQ 
_model_server_result.datetime_utc      '2024-10-15 16:16:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6bm7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":403}' 
#
_entry.id    6BM7 
#
_exptl.entry_id    6BM7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              150.173 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'TRIETHYLENE GLYCOL' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.426 
_cell.angle_gamma         90 
_cell.entry_id            6BM7 
_cell.length_a            81.09 
_cell.length_b            96.25 
_cell.length_c            98.84 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6BM7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,F,G,H,N,O,P,Q,T 1 1 
C,D,E,I,J,K,L,M,R,S 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 7 L N N 
? 7 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B C PYR 1 B PYR 86 1_555 B N SER 2 B SER 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale2 D C PYR 1 D PYR 86 1_555 D N SER 2 D SER 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
#
_chem_comp.formula           'C6 H14 O4' 
_chem_comp.formula_weight    150.173 
_chem_comp.id                PGE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'TRIETHYLENE GLYCOL' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PGE sing 340 n n 
C1 C2 PGE sing 341 n n 
C1 H1 PGE sing 342 n n 
C1 H12 PGE sing 343 n n 
O1 HO1 PGE sing 344 n n 
C2 O2 PGE sing 345 n n 
C2 H2 PGE sing 346 n n 
C2 H22 PGE sing 347 n n 
O2 C3 PGE sing 348 n n 
C3 C4 PGE sing 349 n n 
C3 H3 PGE sing 350 n n 
C3 H32 PGE sing 351 n n 
C4 O3 PGE sing 352 n n 
C4 H4 PGE sing 353 n n 
C4 H42 PGE sing 354 n n 
O4 C6 PGE sing 355 n n 
O4 HO4 PGE sing 356 n n 
C6 C5 PGE sing 357 n n 
C6 H6 PGE sing 358 n n 
C6 H62 PGE sing 359 n n 
C5 O3 PGE sing 360 n n 
C5 H5 PGE sing 361 n n 
C5 H52 PGE sing 362 n n 
#
_atom_sites.entry_id                     6BM7 
_atom_sites.fract_transf_matrix[1][1]    0.012332 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002717 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01039 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01036 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 B3P B 1 401 1 B3P B3P . 
H 5 DY7 B 1 402 4 DY7 56H . 
I 4 B3P D 1 401 2 B3P B3P . 
J 5 DY7 D 1 402 3 DY7 56H . 
K 6 PUT E 1 401 3 PUT PUT . 
L 7 PGE E 1 402 1 PGE PGE . 
M 7 PGE E 1 403 2 PGE PGE . 
N 6 PUT F 1 401 4 PUT PUT . 
O 8 PG4 F 1 402 3 PG4 PG4 . 
P 9 HOH A 1 101 14 HOH HOH . 
Q 9 HOH B 1 501 2 HOH HOH . 
R 9 HOH C 1 101 4 HOH HOH . 
S 9 HOH D 1 501 8 HOH HOH . 
S 9 HOH D 2 502 5 HOH HOH . 
T 9 HOH F 1 501 13 HOH HOH . 
T 9 HOH F 2 502 12 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PGE . . . M 7 -10.973 8.594 17.846 1 73.69 ? C1 PGE 403 E 1 
HETATM 2 O O1 PGE . . . M 7 -10.693 9.158 16.595 1 74.88 ? O1 PGE 403 E 1 
HETATM 3 C C2 PGE . . . M 7 -11.343 7.124 17.664 1 83.01 ? C2 PGE 403 E 1 
HETATM 4 O O2 PGE . . . M 7 -11.701 6.571 18.905 1 90.59 ? O2 PGE 403 E 1 
HETATM 5 C C3 PGE . . . M 7 -11.241 5.265 19.128 1 86.12 ? C3 PGE 403 E 1 
HETATM 6 C C4 PGE . . . M 7 -12.275 4.451 19.9 1 81.75 ? C4 PGE 403 E 1 
HETATM 7 O O4 PGE . . . M 7 -11.511 0.893 18.719 1 65.05 ? O4 PGE 403 E 1 
HETATM 8 C C6 PGE . . . M 7 -12.9 1.069 18.795 1 65.16 ? C6 PGE 403 E 1 
HETATM 9 C C5 PGE . . . M 7 -13.203 2.261 19.697 1 86.01 ? C5 PGE 403 E 1 
HETATM 10 O O3 PGE . . . M 7 -12.782 3.442 19.065 1 90.44 ? O3 PGE 403 E 1 
HETATM 11 H H1 PGE . . . M 7 -11.714 9.066 18.256 1 88.42 ? H1 PGE 403 E 1 
HETATM 12 H H12 PGE . . . M 7 -10.19 8.662 18.415 1 88.42 ? H12 PGE 403 E 1 
HETATM 13 H HO1 PGE . . . M 7 -10.494 9.978 16.692 1 89.85 ? HO1 PGE 403 E 1 
HETATM 14 H H2 PGE . . . M 7 -10.583 6.641 17.303 1 99.61 ? H2 PGE 403 E 1 
HETATM 15 H H22 PGE . . . M 7 -12.092 7.053 17.051 1 99.61 ? H22 PGE 403 E 1 
HETATM 16 H H3 PGE . . . M 7 -10.417 5.3 19.638 1 103.34 ? H3 PGE 403 E 1 
HETATM 17 H H32 PGE . . . M 7 -11.071 4.837 18.274 1 103.34 ? H32 PGE 403 E 1 
HETATM 18 H H4 PGE . . . M 7 -12.999 5.031 20.184 1 98.1 ? H4 PGE 403 E 1 
HETATM 19 H H42 PGE . . . M 7 -11.857 4.049 20.678 1 98.1 ? H42 PGE 403 E 1 
HETATM 20 H HO4 PGE . . . M 7 -11.197 1.382 18.099 1 78.06 ? HO4 PGE 403 E 1 
HETATM 21 H H6 PGE . . . M 7 -13.309 0.27 19.163 1 78.2 ? H6 PGE 403 E 1 
HETATM 22 H H62 PGE . . . M 7 -13.255 1.235 17.907 1 78.2 ? H62 PGE 403 E 1 
HETATM 23 H H5 PGE . . . M 7 -12.732 2.158 20.539 1 103.21 ? H5 PGE 403 E 1 
HETATM 24 H H52 PGE . . . M 7 -14.158 2.307 19.864 1 103.21 ? H52 PGE 403 E 1 
#
_model_server_stats.io_time_ms              58 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    27 
_model_server_stats.query_time_ms           323 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           24 
#