data_6BMM # _model_server_result.job_id -_5H_v5eGwRJd78axOuecA _model_server_result.datetime_utc '2024-11-15 02:20:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6bmm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":402}' # _entry.id 6BMM # _exptl.entry_id 6BMM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.51 _cell.angle_gamma 90 _cell.entry_id 6BMM _cell.length_a 86.519 _cell.length_b 57.7 _cell.length_c 94.098 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BMM _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 L N N ? 2 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 139 B CYS 145 1_555 B SG CYS 156 B CYS 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.555 ? covale ? covale1 A C HIS 149 A HIS 155 1_555 A N CME 150 A CME 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C CME 150 A CME 156 1_555 A N PRO 151 A PRO 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale3 B C HIS 149 B HIS 155 1_555 B N CME 150 B CME 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 B C CME 150 B CME 156 1_555 B N PRO 151 B PRO 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? metalc ? metalc1 A SG CYS 122 A CYS 128 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc2 A SG CYS 125 A CYS 131 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc3 A ND1 HIS 135 A HIS 141 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc4 A SG CYS 136 A CYS 142 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc5 A SG CYS 139 A CYS 145 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc6 A SG CYS 142 A CYS 148 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc7 A ND1 HIS 149 A HIS 155 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc8 A SG CYS 156 A CYS 162 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc9 B SG CYS 122 B CYS 128 1_555 L ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc10 B SG CYS 125 B CYS 131 1_555 L ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc11 B ND1 HIS 135 B HIS 141 1_555 L ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc12 B SG CYS 136 B CYS 142 1_555 M ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc13 B SG CYS 139 B CYS 145 1_555 M ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc14 B SG CYS 142 B CYS 148 1_555 L ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc15 B ND1 HIS 149 B HIS 155 1_555 M ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc16 B SG CYS 156 B CYS 162 1_555 M ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6BMM _atom_sites.fract_transf_matrix[1][1] 0.011558 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005515 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017331 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011775 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 401 401 ZN ZN . D 2 ZN A 1 402 402 ZN ZN . E 3 PO4 A 1 403 403 PO4 PO4 . F 4 OLB A 1 404 404 OLB OLB . G 5 DYD A 1 405 405 DYD LIG . H 5 DYD A 1 406 406 DYD LIG . I 5 DYD A 1 407 407 DYD LIG . J 5 DYD A 1 408 408 DYD LIG . K 5 DYD A 1 409 409 DYD LIG . L 2 ZN B 1 401 401 ZN ZN . M 2 ZN B 1 402 402 ZN ZN . N 3 PO4 B 1 403 403 PO4 PO4 . O 4 OLB B 1 404 404 OLB OLB . P 5 DYD B 1 405 405 DYD LIG . Q 6 HOH A 1 501 40 HOH HOH . Q 6 HOH A 2 502 11 HOH HOH . Q 6 HOH A 3 503 2 HOH HOH . Q 6 HOH A 4 504 27 HOH HOH . Q 6 HOH A 5 505 7 HOH HOH . Q 6 HOH A 6 506 6 HOH HOH . Q 6 HOH A 7 507 43 HOH HOH . Q 6 HOH A 8 508 14 HOH HOH . Q 6 HOH A 9 509 30 HOH HOH . Q 6 HOH A 10 510 20 HOH HOH . Q 6 HOH A 11 511 10 HOH HOH . Q 6 HOH A 12 512 26 HOH HOH . Q 6 HOH A 13 513 45 HOH HOH . Q 6 HOH A 14 514 19 HOH HOH . Q 6 HOH A 15 515 21 HOH HOH . Q 6 HOH A 16 516 13 HOH HOH . Q 6 HOH A 17 517 34 HOH HOH . Q 6 HOH A 18 518 8 HOH HOH . Q 6 HOH A 19 519 5 HOH HOH . Q 6 HOH A 20 520 1 HOH HOH . Q 6 HOH A 21 521 29 HOH HOH . Q 6 HOH A 22 522 23 HOH HOH . Q 6 HOH A 23 523 25 HOH HOH . Q 6 HOH A 24 524 17 HOH HOH . Q 6 HOH A 25 525 9 HOH HOH . Q 6 HOH A 26 526 44 HOH HOH . Q 6 HOH A 27 527 49 HOH HOH . Q 6 HOH A 28 528 28 HOH HOH . Q 6 HOH A 29 529 42 HOH HOH . R 6 HOH B 1 501 18 HOH HOH . R 6 HOH B 2 502 47 HOH HOH . R 6 HOH B 3 503 33 HOH HOH . R 6 HOH B 4 504 36 HOH HOH . R 6 HOH B 5 505 52 HOH HOH . R 6 HOH B 6 506 37 HOH HOH . R 6 HOH B 7 507 4 HOH HOH . R 6 HOH B 8 508 39 HOH HOH . R 6 HOH B 9 509 41 HOH HOH . R 6 HOH B 10 510 50 HOH HOH . R 6 HOH B 11 511 15 HOH HOH . R 6 HOH B 12 512 35 HOH HOH . R 6 HOH B 13 513 24 HOH HOH . R 6 HOH B 14 514 38 HOH HOH . R 6 HOH B 15 515 3 HOH HOH . R 6 HOH B 16 516 31 HOH HOH . R 6 HOH B 17 517 32 HOH HOH . R 6 HOH B 18 518 22 HOH HOH . R 6 HOH B 19 519 48 HOH HOH . R 6 HOH B 20 520 53 HOH HOH . R 6 HOH B 21 521 46 HOH HOH . R 6 HOH B 22 522 16 HOH HOH . R 6 HOH B 23 523 12 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id M _atom_site.label_entity_id 2 _atom_site.Cartn_x 10.729 _atom_site.Cartn_y -7.16 _atom_site.Cartn_z -60.517 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 129.78 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 402 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 246 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #