data_6BMS
#
_model_server_result.job_id            el_PXX0dzbvliueyS_kQ5Q 
_model_server_result.datetime_utc      '2024-11-23 10:52:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6bms 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":1003}' 
#
_entry.id    6BMS 
#
_exptl.entry_id    6BMS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              510.615 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DODECYL-BETA-D-MALTOSIDE 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6BMS 
_cell.length_a            186.402 
_cell.length_b            186.402 
_cell.length_c            90.177 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6BMS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        94 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 42 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,R 1 1 
B,K,L,M,N,O,P,Q,S 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 M N N 
? 3 Q N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 131 A CYS 115 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? 
metalc ? metalc2 A SG CYS 134 A CYS 118 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? 
metalc ? metalc3 A ND1 HIS 144 A HIS 128 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? 
metalc ? metalc4 A SG CYS 145 A CYS 129 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? 
metalc ? metalc5 A SG CYS 148 A CYS 132 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? 
metalc ? metalc6 A SG CYS 151 A CYS 135 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? 
metalc ? metalc7 A ND1 HIS 158 A HIS 142 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? 
metalc ? metalc8 A SG CYS 165 A CYS 149 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
metalc ? metalc9 B SG CYS 131 D CYS 119 1_555 K ZN ZN . D ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? 
metalc ? metalc10 B SG CYS 134 D CYS 122 1_555 K ZN ZN . D ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? 
metalc ? metalc11 B ND1 HIS 144 D HIS 132 1_555 K ZN ZN . D ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? 
metalc ? metalc12 B SG CYS 145 D CYS 133 1_555 L ZN ZN . D ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? 
metalc ? metalc13 B SG CYS 148 D CYS 136 1_555 L ZN ZN . D ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? 
metalc ? metalc14 B SG CYS 151 D CYS 139 1_555 K ZN ZN . D ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? 
metalc ? metalc15 B SG CYS 165 D CYS 153 1_555 L ZN ZN . D ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? 
#
_chem_comp.formula           'C24 H46 O11' 
_chem_comp.formula_weight    510.615 
_chem_comp.id                LMT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DODECYL-BETA-D-MALTOSIDE 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1B C2B LMT sing 194 n n 
C1B O1B LMT sing 195 n n 
C1B O5B LMT sing 196 n n 
C1B H1B LMT sing 197 n n 
C2B C3B LMT sing 198 n n 
C2B O2B LMT sing 199 n n 
C2B H2B LMT sing 200 n n 
C3B C4B LMT sing 201 n n 
C3B O3B LMT sing 202 n n 
C3B H3B LMT sing 203 n n 
C4B C5B LMT sing 204 n n 
C4B O4' LMT sing 205 n n 
C4B H4B LMT sing 206 n n 
C5B C6B LMT sing 207 n n 
C5B O5B LMT sing 208 n n 
C5B H5B LMT sing 209 n n 
C6B O6B LMT sing 210 n n 
C6B "H6'2" LMT sing 211 n n 
C6B "H6'1" LMT sing 212 n n 
O1B C4' LMT sing 213 n n 
O2B H2O1 LMT sing 214 n n 
O3B H3O1 LMT sing 215 n n 
O4' H4O1 LMT sing 216 n n 
O6B H6B LMT sing 217 n n 
C1' C2' LMT sing 218 n n 
C1' O1' LMT sing 219 n n 
C1' O5' LMT sing 220 n n 
C1' H1' LMT sing 221 n n 
C2' C3' LMT sing 222 n n 
C2' O2' LMT sing 223 n n 
C2' H2' LMT sing 224 n n 
C3' C4' LMT sing 225 n n 
C3' O3' LMT sing 226 n n 
C3' H3' LMT sing 227 n n 
C4' C5' LMT sing 228 n n 
C4' H4' LMT sing 229 n n 
C5' C6' LMT sing 230 n n 
C5' O5' LMT sing 231 n n 
C5' H5' LMT sing 232 n n 
C6' O6' LMT sing 233 n n 
C6' H6D LMT sing 234 n n 
C6' H6E LMT sing 235 n n 
O1' C1 LMT sing 236 n n 
O2' H2O2 LMT sing 237 n n 
O3' H3O2 LMT sing 238 n n 
O6' H6' LMT sing 239 n n 
C1 C2 LMT sing 240 n n 
C1 H12 LMT sing 241 n n 
C1 H11 LMT sing 242 n n 
C2 C3 LMT sing 243 n n 
C2 H22 LMT sing 244 n n 
C2 H21 LMT sing 245 n n 
C3 C4 LMT sing 246 n n 
C3 H32 LMT sing 247 n n 
C3 H31 LMT sing 248 n n 
C4 C5 LMT sing 249 n n 
C4 H42 LMT sing 250 n n 
C4 H41 LMT sing 251 n n 
C5 C6 LMT sing 252 n n 
C5 H52 LMT sing 253 n n 
C5 H51 LMT sing 254 n n 
C6 C7 LMT sing 255 n n 
C6 H62 LMT sing 256 n n 
C6 H61 LMT sing 257 n n 
C7 C8 LMT sing 258 n n 
C7 H72 LMT sing 259 n n 
C7 H71 LMT sing 260 n n 
C8 C9 LMT sing 261 n n 
C8 H82 LMT sing 262 n n 
C8 H81 LMT sing 263 n n 
C9 C10 LMT sing 264 n n 
C9 H92 LMT sing 265 n n 
C9 H91 LMT sing 266 n n 
C10 C11 LMT sing 267 n n 
C10 H102 LMT sing 268 n n 
C10 H101 LMT sing 269 n n 
C11 C12 LMT sing 270 n n 
C11 H112 LMT sing 271 n n 
C11 H111 LMT sing 272 n n 
C12 H123 LMT sing 273 n n 
C12 H122 LMT sing 274 n n 
C12 H121 LMT sing 275 n n 
#
_atom_sites.entry_id                     6BMS 
_atom_sites.fract_transf_matrix[1][1]    0.005365 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005365 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011089 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 1001 1001 ZN ZN . 
D 2 ZN A 1 1002 1002 ZN ZN . 
E 3 LMT A 1 1003 2043 LMT LMT . 
F 3 LMT A 1 1004 2043 LMT LMT . 
G 3 LMT A 1 1005 2043 LMT LMT . 
H 4 PLM A 1 1006 2 PLM PLM . 
I 5 POV A 1 1007 1 POV POV . 
J 6 PO4 A 1 1008 1 PO4 PO4 . 
K 2 ZN D 1 1001 1001 ZN ZN . 
L 2 ZN D 1 1002 1002 ZN ZN . 
M 3 LMT D 1 1003 2043 LMT LMT . 
N 4 PLM D 1 1004 3 PLM PLM . 
O 6 PO4 D 1 1005 1 PO4 PO4 . 
P 6 PO4 D 1 1006 1 PO4 PO4 . 
Q 3 LMT D 1 1007 1 LMT LMT . 
R 7 HOH A 1 1101 6 HOH HOH . 
R 7 HOH A 2 1102 57 HOH HOH . 
R 7 HOH A 3 1103 2 HOH HOH . 
R 7 HOH A 4 1104 42 HOH HOH . 
R 7 HOH A 5 1105 22 HOH HOH . 
R 7 HOH A 6 1106 53 HOH HOH . 
R 7 HOH A 7 1107 58 HOH HOH . 
R 7 HOH A 8 1108 23 HOH HOH . 
R 7 HOH A 9 1109 69 HOH HOH . 
R 7 HOH A 10 1110 18 HOH HOH . 
R 7 HOH A 11 1111 16 HOH HOH . 
R 7 HOH A 12 1112 32 HOH HOH . 
R 7 HOH A 13 1113 7 HOH HOH . 
R 7 HOH A 14 1114 5 HOH HOH . 
R 7 HOH A 15 1115 36 HOH HOH . 
R 7 HOH A 16 1116 61 HOH HOH . 
R 7 HOH A 17 1117 17 HOH HOH . 
R 7 HOH A 18 1118 10 HOH HOH . 
R 7 HOH A 19 1119 80 HOH HOH . 
R 7 HOH A 20 1120 11 HOH HOH . 
R 7 HOH A 21 1121 30 HOH HOH . 
R 7 HOH A 22 1122 46 HOH HOH . 
R 7 HOH A 23 1123 48 HOH HOH . 
R 7 HOH A 24 1124 64 HOH HOH . 
R 7 HOH A 25 1125 74 HOH HOH . 
R 7 HOH A 26 1126 78 HOH HOH . 
S 7 HOH D 1 1101 27 HOH HOH . 
S 7 HOH D 2 1102 55 HOH HOH . 
S 7 HOH D 3 1103 4 HOH HOH . 
S 7 HOH D 4 1104 3 HOH HOH . 
S 7 HOH D 5 1105 29 HOH HOH . 
S 7 HOH D 6 1106 21 HOH HOH . 
S 7 HOH D 7 1107 8 HOH HOH . 
S 7 HOH D 8 1108 54 HOH HOH . 
S 7 HOH D 9 1109 12 HOH HOH . 
S 7 HOH D 10 1110 52 HOH HOH . 
S 7 HOH D 11 1111 15 HOH HOH . 
S 7 HOH D 12 1112 43 HOH HOH . 
S 7 HOH D 13 1113 44 HOH HOH . 
S 7 HOH D 14 1114 26 HOH HOH . 
S 7 HOH D 15 1115 37 HOH HOH . 
S 7 HOH D 16 1116 35 HOH HOH . 
S 7 HOH D 17 1117 50 HOH HOH . 
S 7 HOH D 18 1118 47 HOH HOH . 
S 7 HOH D 19 1119 45 HOH HOH . 
S 7 HOH D 20 1120 28 HOH HOH . 
S 7 HOH D 21 1121 76 HOH HOH . 
S 7 HOH D 22 1122 75 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1B LMT . . . M 3 -35.996 13.549 -23.24 1 116.93 ? C1B LMT 1003 D 1 
HETATM 2 C C2B LMT . . . M 3 -35.235 12.314 -22.721 1 120.6 ? C2B LMT 1003 D 1 
HETATM 3 C C3B LMT . . . M 3 -33.789 12.687 -22.331 1 123.2 ? C3B LMT 1003 D 1 
HETATM 4 C C4B LMT . . . M 3 -33.756 13.907 -21.374 1 121.11 ? C4B LMT 1003 D 1 
HETATM 5 C C5B LMT . . . M 3 -34.681 15.005 -21.935 1 122.24 ? C5B LMT 1003 D 1 
HETATM 6 C C6B LMT . . . M 3 -33.936 16.335 -21.978 1 122.67 ? C6B LMT 1003 D 1 
HETATM 7 O O1B LMT . . . M 3 -37.156 13.732 -22.493 1 100.47 ? O1B LMT 1003 D 1 
HETATM 8 O O2B LMT . . . M 3 -35.926 11.835 -21.638 1 120.39 ? O2B LMT 1003 D 1 
HETATM 9 O O3B LMT . . . M 3 -32.995 12.864 -23.435 1 121.18 ? O3B LMT 1003 D 1 
HETATM 10 O O4' LMT . . . M 3 -34.181 13.551 -20.114 1 118.52 ? O4' LMT 1003 D 1 
HETATM 11 O O5B LMT . . . M 3 -35.195 14.692 -23.206 1 124.81 ? O5B LMT 1003 D 1 
HETATM 12 O O6B LMT . . . M 3 -33.155 16.477 -20.86 1 125.71 ? O6B LMT 1003 D 1 
HETATM 13 C C1' LMT . . . M 3 -41.254 13.401 -22.744 1 76.71 ? C1' LMT 1003 D 1 
HETATM 14 C C2' LMT . . . M 3 -40.479 12.162 -23.23 1 84.51 ? C2' LMT 1003 D 1 
HETATM 15 C C3' LMT . . . M 3 -39.017 12.245 -22.733 1 85.06 ? C3' LMT 1003 D 1 
HETATM 16 C C4' LMT . . . M 3 -38.384 13.576 -23.17 1 89.26 ? C4' LMT 1003 D 1 
HETATM 17 C C5' LMT . . . M 3 -39.339 14.691 -22.689 1 88.47 ? C5' LMT 1003 D 1 
HETATM 18 C C6' LMT . . . M 3 -38.814 16.076 -22.953 1 91.04 ? C6' LMT 1003 D 1 
HETATM 19 O O1' LMT . . . M 3 -42.535 13.382 -23.226 1 57.17 ? O1' LMT 1003 D 1 
HETATM 20 O O2' LMT . . . M 3 -41.059 11.039 -22.7 1 102.16 ? O2' LMT 1003 D 1 
HETATM 21 O O3' LMT . . . M 3 -38.291 11.199 -23.215 1 95.85 ? O3' LMT 1003 D 1 
HETATM 22 O O5' LMT . . . M 3 -40.615 14.555 -23.266 1 91.47 ? O5' LMT 1003 D 1 
HETATM 23 O O6' LMT . . . M 3 -39.064 16.328 -24.277 1 104.17 ? O6' LMT 1003 D 1 
HETATM 24 C C1 LMT . . . M 3 -43.559 13.597 -22.269 1 74.44 ? C1 LMT 1003 D 1 
HETATM 25 C C2 LMT . . . M 3 -43.393 12.526 -21.225 1 85.89 ? C2 LMT 1003 D 1 
HETATM 26 C C3 LMT . . . M 3 -44.639 11.951 -20.637 1 83.33 ? C3 LMT 1003 D 1 
HETATM 27 C C4 LMT . . . M 3 -44.599 10.463 -20.875 1 74.05 ? C4 LMT 1003 D 1 
HETATM 28 C C5 LMT . . . M 3 -45.617 9.773 -20.032 1 77.92 ? C5 LMT 1003 D 1 
HETATM 29 C C6 LMT . . . M 3 -46.467 8.839 -20.827 1 72.96 ? C6 LMT 1003 D 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    34 
_model_server_stats.query_time_ms           321 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           29 
#