data_6BOC # _model_server_result.job_id OwtZke-5FSrduFhu7hZ-IA _model_server_result.datetime_utc '2025-01-10 20:58:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6boc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":101}' # _entry.id 6BOC # _exptl.entry_id 6BOC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 179.302 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description RIMANTADINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.23 _cell.angle_gamma 90 _cell.entry_id 6BOC _cell.length_a 34.05 _cell.length_b 34.02 _cell.length_c 72.09 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BOC _symmetry.cell_setting ? _symmetry.Int_Tables_number 3 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ACE 1 A ACE 21 1_555 A N SER 2 A SER 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.294 ? covale ? covale2 A C LEU 26 A LEU 46 1_555 A N NH2 27 A NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale3 B C ACE 1 B ACE 21 1_555 B N SER 2 B SER 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale4 B C LEU 26 B LEU 46 1_555 B N NH2 27 B NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale5 C C ACE 1 C ACE 21 1_555 C N SER 2 C SER 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale6 C C LEU 26 C LEU 46 1_555 C N NH2 27 C NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale7 D C ACE 1 D ACE 21 1_555 D N SER 2 D SER 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? covale ? covale8 D C LEU 26 D LEU 46 1_555 D N NH2 27 D NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.315 ? metalc ? metalc1 A O SER 2 A SER 22 1_555 H NA NA . C NA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc2 I O HOH . A HOH 202 1_555 H NA NA . C NA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.972 ? metalc ? metalc3 B O SER 2 B SER 22 1_555 H NA NA . C NA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? metalc ? metalc4 C O SER 2 C SER 22 1_555 H NA NA . C NA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc5 H NA NA . C NA 102 1_555 D O SER 2 D SER 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? # _chem_comp.formula 'C12 H21 N' _chem_comp.formula_weight 179.302 _chem_comp.id RIM _chem_comp.mon_nstd_flag . _chem_comp.name RIMANTADINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-(1-ADAMANTYL)ETHANAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CA CB RIM sing 189 n n CA HA1 RIM sing 190 n n CA HA2 RIM sing 191 n n CA HA3 RIM sing 192 n n CB CD RIM sing 193 n n CB NC RIM sing 194 n n CB HB RIM sing 195 n n NC HNC1 RIM sing 196 n n NC HNC2 RIM sing 197 n n CD CE2 RIM sing 198 n n CD CE1 RIM sing 199 n n CD CE3 RIM sing 200 n n CE1 CF1 RIM sing 201 n n CE1 HE11 RIM sing 202 n n CE1 HE12 RIM sing 203 n n CE2 CF2 RIM sing 204 n n CE2 HE21 RIM sing 205 n n CE2 HE22 RIM sing 206 n n CE3 CF3 RIM sing 207 n n CE3 HE31 RIM sing 208 n n CE3 HE32 RIM sing 209 n n CF1 CG1 RIM sing 210 n n CF1 CG3 RIM sing 211 n n CF1 HF1 RIM sing 212 n n CF2 CG1 RIM sing 213 n n CF2 CG2 RIM sing 214 n n CF2 HF2 RIM sing 215 n n CF3 CG2 RIM sing 216 n n CF3 CG3 RIM sing 217 n n CF3 HF3 RIM sing 218 n n CG1 HG11 RIM sing 219 n n CG1 HG12 RIM sing 220 n n CG2 HG21 RIM sing 221 n n CG2 HG22 RIM sing 222 n n CG3 HG31 RIM sing 223 n n CG3 HG32 RIM sing 224 n n # _atom_sites.entry_id 6BOC _atom_sites.fract_transf_matrix[1][1] 0.029368 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000118 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.029394 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013872 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 CL A 1 101 1 CL CL . F 3 EU7 A 1 102 1 EU7 EU7 . G 4 RIM C 1 101 1 RIM RIM . H 5 NA C 1 102 1 NA NA . I 6 HOH A 1 201 31 HOH HOH . I 6 HOH A 2 202 1 HOH HOH . I 6 HOH A 3 203 36 HOH HOH . I 6 HOH A 4 204 37 HOH HOH . I 6 HOH A 5 205 21 HOH HOH . I 6 HOH A 6 206 22 HOH HOH . I 6 HOH A 7 207 3 HOH HOH . I 6 HOH A 8 208 4 HOH HOH . J 6 HOH B 1 101 30 HOH HOH . J 6 HOH B 2 102 35 HOH HOH . J 6 HOH B 3 103 5 HOH HOH . J 6 HOH B 4 104 17 HOH HOH . J 6 HOH B 5 105 18 HOH HOH . J 6 HOH B 6 106 6 HOH HOH . J 6 HOH B 7 107 16 HOH HOH . J 6 HOH B 8 108 19 HOH HOH . J 6 HOH B 9 109 15 HOH HOH . J 6 HOH B 10 110 20 HOH HOH . K 6 HOH C 1 201 34 HOH HOH . K 6 HOH C 2 202 29 HOH HOH . K 6 HOH C 3 203 13 HOH HOH . K 6 HOH C 4 204 8 HOH HOH . K 6 HOH C 5 205 12 HOH HOH . K 6 HOH C 6 206 7 HOH HOH . K 6 HOH C 7 207 11 HOH HOH . K 6 HOH C 8 208 27 HOH HOH . K 6 HOH C 9 209 14 HOH HOH . K 6 HOH C 10 210 28 HOH HOH . L 6 HOH D 1 101 32 HOH HOH . L 6 HOH D 2 102 33 HOH HOH . L 6 HOH D 3 103 9 HOH HOH . L 6 HOH D 4 104 25 HOH HOH . L 6 HOH D 5 105 2 HOH HOH . L 6 HOH D 6 106 26 HOH HOH . L 6 HOH D 7 107 24 HOH HOH . L 6 HOH D 8 108 23 HOH HOH . L 6 HOH D 9 109 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CA RIM . A . G 4 -1.028 -46.341 16.727 0.5 44.78 ? CA RIM 101 C 1 HETATM 2 C CB RIM . A . G 4 -0.623 -44.93 17.157 0.5 49.25 ? CB RIM 101 C 1 HETATM 3 N NC RIM . A . G 4 -1.626 -43.966 16.685 0.5 49.86 ? NC RIM 101 C 1 HETATM 4 C CD RIM . A . G 4 -0.534 -44.866 18.683 0.5 45.89 ? CD RIM 101 C 1 HETATM 5 C CE1 RIM . A . G 4 0.511 -45.87 19.175 0.5 41.47 ? CE1 RIM 101 C 1 HETATM 6 C CE2 RIM . A . G 4 -0.128 -43.457 19.112 0.5 43.72 ? CE2 RIM 101 C 1 HETATM 7 C CE3 RIM . A . G 4 -1.896 -45.211 19.287 0.5 42.13 ? CE3 RIM 101 C 1 HETATM 8 C CF1 RIM . A . G 4 0.599 -45.81 20.701 0.5 39.22 ? CF1 RIM 101 C 1 HETATM 9 C CF2 RIM . A . G 4 -0.039 -43.393 20.639 0.5 38.4 ? CF2 RIM 101 C 1 HETATM 10 C CF3 RIM . A . G 4 -1.808 -45.15 20.815 0.5 37.21 ? CF3 RIM 101 C 1 HETATM 11 C CG1 RIM . A . G 4 1.005 -44.398 21.13 0.5 37.14 ? CG1 RIM 101 C 1 HETATM 12 C CG2 RIM . A . G 4 -1.404 -43.74 21.244 0.5 37.49 ? CG2 RIM 101 C 1 HETATM 13 C CG3 RIM . A . G 4 -0.762 -46.153 21.306 0.5 37.94 ? CG3 RIM 101 C 1 # _model_server_stats.io_time_ms 95 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #