data_6BPL # _model_server_result.job_id TpetBE3B0N40pDIhXK9YPQ _model_server_result.datetime_utc '2025-01-09 07:37:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6bpl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":604}' # _entry.id 6BPL # _exptl.entry_id 6BPL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 433.927 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2E)-3-{6-[(1S)-1-(2-chloro-6-cyclopropylphenyl)ethoxy]-4-cyclopropylquinolin-3-yl}prop-2-enoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 89.39 _cell.angle_gamma 90 _cell.entry_id 6BPL _cell.length_a 74.747 _cell.length_b 91.606 _cell.length_c 111.013 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BPL _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 O N N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 GLC GMH C1 O1 . O3 HO3 . sing 2 ? 2 3 2 GLC GLC C1 O1 . O3 HO3 . sing 3 ? 2 4 2 GLC GLC C1 O1 . O6 HO6 . sing 4 ? 2 5 1 GMH GMH C1 O1 . O7 HO7 . sing 5 ? 3 2 1 KDO GCS C2 O2 . O6 HO6 . sing 6 ? 3 3 2 KDO KDO C2 O2 . O4 HO4 . sing 7 ? 3 4 2 GMH KDO C1 O1 . O5 HO5 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C GMH 1 C 1 GMH L 2015 GMH 2 n C GLC 2 C 2 GLC L 2016 GLC 2 n C GLC 3 C 3 GLC L 2018 GLC 2 n C GLC 4 C 4 GLC L 2019 GLC 2 n C GMH 5 C 5 GMH L 2017 GMH 3 n D GCS 1 D 1 GCS L 2005 GCS 3 n D KDO 2 D 2 KDO L 2011 KDO 3 n D KDO 3 D 3 KDO L 2012 KDO 3 n D GMH 4 D 4 GMH L 2013 GMH # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 G C1 FTT . A FTT 603 1_555 P N2 PA1 . B PA1 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? covale ? covale2 H O3 FTT . A FTT 604 1_555 S C1 DAO . B DAO 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? covale ? covale3 H C1 FTT . A FTT 604 1_555 D N2 GCS . D GCS 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? covale ? covale4 I O3 FTT . A FTT 605 1_555 J C1 MYR . A MYR 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.375 ? covale ? covale5 I C1 FTT . A FTT 605 1_555 D O3 GCS . D GCS 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.373 ? covale ? covale6 K P PO4 . A PO4 607 1_555 D O4 GCS . D GCS 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.558 ? covale ? covale7 P O1 PA1 . B PA1 605 1_555 Q P PO4 . B PO4 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.56 ? covale ? covale8 P O3 PA1 . B PA1 605 1_555 R C1 FTT . B FTT 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.375 ? covale ? covale9 T P1 DPO . B DPO 609 1_555 D O4 GMH . D GMH 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.557 ? covale ? covale10 C O3 GMH . C GMH 1 1_555 C C1 GLC . C GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? covale ? covale11 C O7 GMH . C GMH 1 1_555 C C1 GMH . C GMH 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? covale ? covale12 C O3 GLC . C GLC 2 1_555 C C1 GLC . C GLC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.463 ? covale ? covale13 C O6 GLC . C GLC 2 1_555 C C1 GLC . C GLC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale14 D O6 GCS . D GCS 1 1_555 D C2 KDO . D KDO 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? covale ? covale15 D O4 KDO . D KDO 2 1_555 D C2 KDO . D KDO 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? covale ? covale16 D O5 KDO . D KDO 2 1_555 D C1 GMH . D GMH 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? # _chem_comp.formula 'C26 H24 Cl N O3' _chem_comp.formula_weight 433.927 _chem_comp.id AU7 _chem_comp.mon_nstd_flag . _chem_comp.name '(2E)-3-{6-[(1S)-1-(2-chloro-6-cyclopropylphenyl)ethoxy]-4-cyclopropylquinolin-3-yl}prop-2-enoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O28 C26 AU7 doub 202 n n C26 O27 AU7 sing 203 n n C26 C25 AU7 sing 204 n n C25 C24 AU7 doub 205 e n C24 C21 AU7 sing 206 n n C22 C21 AU7 sing 207 n y C22 N23 AU7 doub 208 n y C21 C20 AU7 doub 209 n y N23 C17 AU7 sing 210 n y C20 C29 AU7 sing 211 n n C20 C18 AU7 sing 212 n y C31 C29 AU7 sing 213 n n C31 C30 AU7 sing 214 n n C29 C30 AU7 sing 215 n n C17 C18 AU7 doub 216 n y C17 C16 AU7 sing 217 n y C18 C19 AU7 sing 218 n y C16 C15 AU7 doub 219 n y C19 C14 AU7 doub 220 n y C15 C14 AU7 sing 221 n y C14 O13 AU7 sing 222 n n O13 C2 AU7 sing 223 n n CL9 C8 AU7 sing 224 n n C2 C3 AU7 sing 225 n n C2 C1 AU7 sing 226 n n C8 C3 AU7 doub 227 n y C8 C7 AU7 sing 228 n y C3 C4 AU7 sing 229 n y C7 C6 AU7 doub 230 n y C4 C10 AU7 sing 231 n n C4 C5 AU7 doub 232 n y C10 C12 AU7 sing 233 n n C10 C11 AU7 sing 234 n n C6 C5 AU7 sing 235 n y C12 C11 AU7 sing 236 n n C5 H1 AU7 sing 237 n n C6 H2 AU7 sing 238 n n C11 H3 AU7 sing 239 n n C11 H4 AU7 sing 240 n n C7 H5 AU7 sing 241 n n C10 H6 AU7 sing 242 n n C12 H7 AU7 sing 243 n n C12 H8 AU7 sing 244 n n C1 H9 AU7 sing 245 n n C1 H10 AU7 sing 246 n n C1 H11 AU7 sing 247 n n C15 H12 AU7 sing 248 n n C16 H13 AU7 sing 249 n n C19 H14 AU7 sing 250 n n C2 H15 AU7 sing 251 n n C22 H16 AU7 sing 252 n n C24 H17 AU7 sing 253 n n C25 H18 AU7 sing 254 n n C29 H19 AU7 sing 255 n n C30 H20 AU7 sing 256 n n C30 H21 AU7 sing 257 n n C31 H22 AU7 sing 258 n n C31 H23 AU7 sing 259 n n O27 H24 AU7 sing 260 n n # _atom_sites.entry_id 6BPL _atom_sites.fract_transf_matrix[1][1] 0.013378 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] -0.000143 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010916 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009008 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 3PE A 1 601 2 3PE 3PE . F 5 AU7 A 1 602 1 AU7 DRG . G 6 FTT A 1 603 2003 FTT FTT . H 6 FTT A 1 604 2006 FTT FTT . I 6 FTT A 1 605 2008 FTT FTT . J 7 MYR A 1 606 2009 MYR MYR . K 8 PO4 A 1 607 2010 PO4 PO4 . L 4 3PE B 1 601 1 3PE 3PE . M 4 3PE B 1 602 3 3PE 3PE . N 4 3PE B 1 603 4 3PE 3PE . O 5 AU7 B 1 604 2 AU7 DRG . P 9 PA1 B 1 605 2001 PA1 PA1 . Q 8 PO4 B 1 606 2002 PO4 PO4 . R 6 FTT B 1 607 2004 FTT FTT . S 10 DAO B 1 608 2007 DAO DAO . T 11 DPO B 1 609 2014 DPO DPO . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 AU7 . . . O 5 -66.454 34.882 37.802 1 70.04 ? C4 AU7 604 B 1 HETATM 2 C C14 AU7 . . . O 5 -64.559 36.926 35.601 1 80.1 ? C14 AU7 604 B 1 HETATM 3 C C5 AU7 . . . O 5 -66.995 33.616 37.937 1 67.84 ? C5 AU7 604 B 1 HETATM 4 C C6 AU7 . . . O 5 -66.221 32.563 38.392 1 54.46 ? C6 AU7 604 B 1 HETATM 5 C C11 AU7 . . . O 5 -68.833 35.842 37.553 1 53.64 ? C11 AU7 604 B 1 HETATM 6 C C7 AU7 . . . O 5 -64.895 32.775 38.71 1 50.03 ? C7 AU7 604 B 1 HETATM 7 C C8 AU7 . . . O 5 -64.354 34.042 38.571 1 64.84 ? C8 AU7 604 B 1 HETATM 8 C C10 AU7 . . . O 5 -67.333 36.001 37.31 1 59.05 ? C10 AU7 604 B 1 HETATM 9 C C12 AU7 . . . O 5 -68.271 35.723 36.134 1 65.53 ? C12 AU7 604 B 1 HETATM 10 C C3 AU7 . . . O 5 -65.123 35.097 38.119 1 69.75 ? C3 AU7 604 B 1 HETATM 11 C C1 AU7 . . . O 5 -64.715 37.251 39.272 1 64.8 ? C1 AU7 604 B 1 HETATM 12 C C15 AU7 . . . O 5 -65.139 37.654 34.556 1 69.08 ? C15 AU7 604 B 1 HETATM 13 C C16 AU7 . . . O 5 -64.786 37.44 33.263 1 59.32 ? C16 AU7 604 B 1 HETATM 14 C C17 AU7 . . . O 5 -63.815 36.472 32.96 1 71.58 ? C17 AU7 604 B 1 HETATM 15 C C18 AU7 . . . O 5 -63.216 35.725 34.01 1 72.38 ? C18 AU7 604 B 1 HETATM 16 C C19 AU7 . . . O 5 -63.609 35.973 35.341 1 67.25 ? C19 AU7 604 B 1 HETATM 17 C C2 AU7 . . . O 5 -64.466 36.454 37.99 1 60.31 ? C2 AU7 604 B 1 HETATM 18 C C20 AU7 . . . O 5 -62.243 34.752 33.696 1 74.6 ? C20 AU7 604 B 1 HETATM 19 C C21 AU7 . . . O 5 -61.912 34.582 32.342 1 69.92 ? C21 AU7 604 B 1 HETATM 20 C C22 AU7 . . . O 5 -62.559 35.369 31.372 1 72.13 ? C22 AU7 604 B 1 HETATM 21 C C24 AU7 . . . O 5 -60.903 33.61 31.884 1 71.12 ? C24 AU7 604 B 1 HETATM 22 C C25 AU7 . . . O 5 -60.167 33.887 30.783 1 81.32 ? C25 AU7 604 B 1 HETATM 23 C C26 AU7 . . . O 5 -59.148 32.949 30.307 1 82.94 ? C26 AU7 604 B 1 HETATM 24 C C29 AU7 . . . O 5 -61.6 33.963 34.82 1 69.09 ? C29 AU7 604 B 1 HETATM 25 C C30 AU7 . . . O 5 -62.427 32.828 35.43 1 72.68 ? C30 AU7 604 B 1 HETATM 26 C C31 AU7 . . . O 5 -61.17 32.505 34.625 1 60.49 ? C31 AU7 604 B 1 HETATM 27 N N23 AU7 . . . O 5 -63.461 36.257 31.692 1 71.54 ? N23 AU7 604 B 1 HETATM 28 O O13 AU7 . . . O 5 -64.968 37.2 36.875 1 74.01 ? O13 AU7 604 B 1 HETATM 29 O O27 AU7 . . . O 5 -58.489 33.211 29.317 1 73.92 ? O27 AU7 604 B 1 HETATM 30 O O28 AU7 . . . O 5 -58.931 31.799 30.976 1 72.57 ? O28 AU7 604 B 1 HETATM 31 CL CL9 AU7 . . . O 5 -62.691 34.333 38.966 1 81.1 ? CL9 AU7 604 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 31 #