data_6BPP # _model_server_result.job_id RaxPFOh5vor9QO0KhhQsyg _model_server_result.datetime_utc '2024-11-21 13:58:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6bpp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":601}' # _entry.id 6BPP # _exptl.entry_id 6BPP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.323 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2E)-3-{6-[(1S)-1-(3-amino-2,6-dichlorophenyl)ethoxy]-4-cyclopropylquinolin-3-yl}prop-2-enoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.29 _cell.angle_gamma 90 _cell.entry_id 6BPP _cell.length_a 256.286 _cell.length_b 89.786 _cell.length_c 72.509 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BPP _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 L N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 GCS PA1 C1 O1 . O6 HO6 . sing 2 ? 2 3 2 KDO GCS C2 O2 . O6 HO6 . sing 3 ? 2 4 3 GMH KDO C1 O1 . O5 HO5 . sing 4 ? 2 5 4 GMH GMH C1 O1 . O3 HO3 . sing 5 ? 2 6 5 GLC GMH C1 O1 . O3 HO3 . sing 6 ? 2 7 6 GLC GLC C1 O1 . O3 HO3 . sing 7 ? 2 8 6 GLC GLC C1 O1 . O6 HO6 . sing 8 ? 2 9 5 GMH GMH C1 O1 . O7 HO7 . sing 9 ? 2 10 3 KDO KDO C2 O2 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C PA1 1 C 1 PA1 L 2001 PA1 2 n C GCS 2 C 2 GCS L 2005 GCS 2 n C KDO 3 C 3 KDO L 2011 KDO 2 n C GMH 4 C 4 GMH L 2013 GMH 2 n C GMH 5 C 5 GMH L 2015 GMH 2 n C GLC 6 C 6 GLC L 2016 GLC 2 n C GLC 7 C 7 GLC L 2018 GLC 2 n C GLC 8 C 8 GLC L 2019 GLC 2 n C GMH 9 C 9 GMH L 2017 GMH 2 n C KDO 10 C 10 KDO L 2012 KDO # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 E C1 FTT . A FTT 602 1_555 C N2 PA1 . C PA1 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.427 ? covale ? covale2 F C1 DAO . A DAO 603 1_555 O O3 FTT . B FTT 614 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? covale ? covale3 G O3 FTT . A FTT 604 1_555 P C1 MYR . B MYR 615 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? covale ? covale4 G C1 FTT . A FTT 604 1_555 C O3 GCS . C GCS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.373 ? covale ? covale5 M P PO4 . B PO4 612 1_555 C O1 PA1 . C PA1 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.559 ? covale ? covale6 N C1 FTT . B FTT 613 1_555 C O3 PA1 . C PA1 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.375 ? covale ? covale7 O C1 FTT . B FTT 614 1_555 C N2 GCS . C GCS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.429 ? covale ? covale8 Q P PO4 . B PO4 616 1_555 C O4 GCS . C GCS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.56 ? covale ? covale9 C O6 PA1 . C PA1 1 1_555 C C1 GCS . C GCS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? covale ? covale10 C O6 GCS . C GCS 2 1_555 C C2 KDO . C KDO 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? covale ? covale11 C O5 KDO . C KDO 3 1_555 C C1 GMH . C GMH 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? covale ? covale12 C O4 KDO . C KDO 3 1_555 C C2 KDO . C KDO 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.377 ? covale ? covale13 C O3 GMH . C GMH 4 1_555 C C1 GMH . C GMH 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale14 C O3 GMH . C GMH 5 1_555 C C1 GLC . C GLC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? covale ? covale15 C O7 GMH . C GMH 5 1_555 C C1 GMH . C GMH 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? covale ? covale16 C O3 GLC . C GLC 6 1_555 C C1 GLC . C GLC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale17 C O6 GLC . C GLC 6 1_555 C C1 GLC . C GLC 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? # _chem_comp.formula 'C23 H20 Cl2 N2 O3' _chem_comp.formula_weight 443.323 _chem_comp.id E1M _chem_comp.mon_nstd_flag . _chem_comp.name '(2E)-3-{6-[(1S)-1-(3-amino-2,6-dichlorophenyl)ethoxy]-4-cyclopropylquinolin-3-yl}prop-2-enoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N23 C22 E1M sing 252 n y N23 C17 E1M doub 253 n y C16 C17 E1M sing 254 n y C16 C15 E1M doub 255 n y C22 C21 E1M doub 256 n y C17 C18 E1M sing 257 n y C15 C14 E1M sing 258 n y CL12 C5 E1M sing 259 n n C21 C24 E1M sing 260 n n C21 C20 E1M sing 261 n y C25 C24 E1M doub 262 e n C25 C26 E1M sing 263 n n C18 C20 E1M doub 264 n y C18 C19 E1M sing 265 n y O28 C26 E1M doub 266 n n C14 O13 E1M sing 267 n n C14 C19 E1M doub 268 n y C6 C5 E1M doub 269 n y C6 C7 E1M sing 270 n y C5 C4 E1M sing 271 n y C26 O27 E1M sing 272 n n C20 C29 E1M sing 273 n n O13 C2 E1M sing 274 n n C7 C8 E1M doub 275 n y C4 C2 E1M sing 276 n n C4 C9 E1M doub 277 n y C2 C1 E1M sing 278 n n C31 C29 E1M sing 279 n n C31 C30 E1M sing 280 n n C29 C30 E1M sing 281 n n C8 C9 E1M sing 282 n y C8 N11 E1M sing 283 n n C9 CL10 E1M sing 284 n n C6 H1 E1M sing 285 n n C7 H2 E1M sing 286 n n C1 H3 E1M sing 287 n n C1 H4 E1M sing 288 n n C1 H5 E1M sing 289 n n C15 H6 E1M sing 290 n n C16 H7 E1M sing 291 n n C19 H8 E1M sing 292 n n C2 H9 E1M sing 293 n n C22 H10 E1M sing 294 n n C24 H11 E1M sing 295 n n C25 H12 E1M sing 296 n n C29 H13 E1M sing 297 n n C30 H14 E1M sing 298 n n C30 H15 E1M sing 299 n n C31 H16 E1M sing 300 n n C31 H17 E1M sing 301 n n N11 H18 E1M sing 302 n n N11 H19 E1M sing 303 n n O27 H20 E1M sing 304 n n # _atom_sites.entry_id 6BPP _atom_sites.fract_transf_matrix[1][1] 0.003902 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000088 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011138 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013795 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 E1M A 1 601 1 E1M DRG . E 4 FTT A 1 602 2003 FTT FTT . F 5 DAO A 1 603 2007 DAO DAO . G 4 FTT A 1 604 2008 FTT FTT . H 6 3PE A 1 605 2 3PE 3PE . I 6 3PE A 1 606 6 3PE 3PE . J 6 3PE A 1 607 9 3PE 3PE . K 6 3PE A 1 608 10 3PE 3PE . L 3 E1M B 1 601 2 E1M DRG . M 7 PO4 B 1 612 2002 PO4 PO4 . N 4 FTT B 1 613 2004 FTT FTT . O 4 FTT B 1 614 2006 FTT FTT . P 8 MYR B 1 615 2009 MYR MYR . Q 7 PO4 B 1 616 2010 PO4 PO4 . R 6 3PE B 1 617 1 3PE 3PE . S 6 3PE B 1 618 3 3PE 3PE . T 6 3PE B 1 619 5 3PE 3PE . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 E1M . . . D 3 -22.682 -4.683 22.164 1 29.51 ? C4 E1M 601 A 1 HETATM 2 C C14 E1M . . . D 3 -24.85 -6.294 20.698 1 49.07 ? C14 E1M 601 A 1 HETATM 3 C C5 E1M . . . D 3 -22.04 -4.291 20.997 1 36.54 ? C5 E1M 601 A 1 HETATM 4 C C6 E1M . . . D 3 -21.697 -2.961 20.799 1 28.94 ? C6 E1M 601 A 1 HETATM 5 C C7 E1M . . . D 3 -21.987 -2.009 21.766 1 27.93 ? C7 E1M 601 A 1 HETATM 6 C C8 E1M . . . D 3 -22.628 -2.387 22.942 1 30.23 ? C8 E1M 601 A 1 HETATM 7 C C9 E1M . . . D 3 -22.972 -3.734 23.132 1 33.54 ? C9 E1M 601 A 1 HETATM 8 C C1 E1M . . . D 3 -21.811 -6.946 22.727 1 50.59 ? C1 E1M 601 A 1 HETATM 9 C C15 E1M . . . D 3 -25.203 -6.898 19.494 1 44.14 ? C15 E1M 601 A 1 HETATM 10 C C16 E1M . . . D 3 -26.366 -6.606 18.867 1 40.47 ? C16 E1M 601 A 1 HETATM 11 C C17 E1M . . . D 3 -27.271 -5.69 19.426 1 48.05 ? C17 E1M 601 A 1 HETATM 12 C C18 E1M . . . D 3 -26.936 -5.06 20.658 1 45.84 ? C18 E1M 601 A 1 HETATM 13 C C19 E1M . . . D 3 -25.7 -5.378 21.283 1 42.49 ? C19 E1M 601 A 1 HETATM 14 C C2 E1M . . . D 3 -23.065 -6.136 22.387 1 37.93 ? C2 E1M 601 A 1 HETATM 15 C C20 E1M . . . D 3 -27.863 -4.141 21.197 1 44.66 ? C20 E1M 601 A 1 HETATM 16 C C21 E1M . . . D 3 -29.057 -3.922 20.489 1 45.59 ? C21 E1M 601 A 1 HETATM 17 C C22 E1M . . . D 3 -29.298 -4.595 19.279 1 43.45 ? C22 E1M 601 A 1 HETATM 18 C C24 E1M . . . D 3 -30.088 -2.997 20.985 1 47.45 ? C24 E1M 601 A 1 HETATM 19 C C25 E1M . . . D 3 -31.369 -3.193 20.605 1 40.59 ? C25 E1M 601 A 1 HETATM 20 C C26 E1M . . . D 3 -32.441 -2.317 21.075 1 46.66 ? C26 E1M 601 A 1 HETATM 21 C C29 E1M . . . D 3 -27.594 -3.429 22.501 1 36.52 ? C29 E1M 601 A 1 HETATM 22 C C30 E1M . . . D 3 -26.306 -2.611 22.651 1 45.3 ? C30 E1M 601 A 1 HETATM 23 C C31 E1M . . . D 3 -27.643 -1.899 22.449 1 36.07 ? C31 E1M 601 A 1 HETATM 24 N N11 E1M . . . D 3 -22.919 -1.41 23.913 1 42.05 ? N11 E1M 601 A 1 HETATM 25 N N23 E1M . . . D 3 -28.423 -5.428 18.793 1 41.87 ? N23 E1M 601 A 1 HETATM 26 O O13 E1M . . . D 3 -23.645 -6.693 21.206 1 41.95 ? O13 E1M 601 A 1 HETATM 27 O O27 E1M . . . D 3 -32.198 -1.395 21.83 1 43.49 ? O27 E1M 601 A 1 HETATM 28 O O28 E1M . . . D 3 -33.707 -2.548 20.671 1 59.99 ? O28 E1M 601 A 1 HETATM 29 CL CL10 E1M . . . D 3 -23.773 -4.275 24.579 1 61.26 ? CL10 E1M 601 A 1 HETATM 30 CL CL12 E1M . . . D 3 -21.677 -5.489 19.788 1 46.7 ? CL12 E1M 601 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 30 #