data_6BQ4 # _model_server_result.job_id 8CWDLNgheddXwaSMuayQBg _model_server_result.datetime_utc '2024-11-28 20:18:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6bq4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":403}' # _entry.id 6BQ4 # _exptl.entry_id 6BQ4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6BQ4 _cell.length_a 81.04 _cell.length_b 81.04 _cell.length_c 163.8 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BQ4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 207 n n C1 C2 GOL sing 208 n n C1 H11 GOL sing 209 n n C1 H12 GOL sing 210 n n O1 HO1 GOL sing 211 n n C2 O2 GOL sing 212 n n C2 C3 GOL sing 213 n n C2 H2 GOL sing 214 n n O2 HO2 GOL sing 215 n n C3 O3 GOL sing 216 n n C3 H31 GOL sing 217 n n C3 H32 GOL sing 218 n n O3 HO3 GOL sing 219 n n # _atom_sites.entry_id 6BQ4 _atom_sites.fract_transf_matrix[1][1] 0.01234 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01234 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006105 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ADN A 1 401 1 ADN ADN . D 3 B3P A 1 402 1 B3P B3P . E 4 GOL A 1 403 2 GOL GOL . F 2 ADN B 1 401 2 ADN ADN . G 5 MES B 1 402 1 MES MES . H 4 GOL B 1 403 1 GOL GOL . I 6 HOH A 1 501 116 HOH HOH . I 6 HOH A 2 502 127 HOH HOH . I 6 HOH A 3 503 175 HOH HOH . I 6 HOH A 4 504 177 HOH HOH . I 6 HOH A 5 505 114 HOH HOH . I 6 HOH A 6 506 64 HOH HOH . I 6 HOH A 7 507 113 HOH HOH . I 6 HOH A 8 508 137 HOH HOH . I 6 HOH A 9 509 124 HOH HOH . I 6 HOH A 10 510 65 HOH HOH . I 6 HOH A 11 511 135 HOH HOH . I 6 HOH A 12 512 63 HOH HOH . I 6 HOH A 13 513 99 HOH HOH . I 6 HOH A 14 514 57 HOH HOH . I 6 HOH A 15 515 140 HOH HOH . I 6 HOH A 16 516 136 HOH HOH . I 6 HOH A 17 517 117 HOH HOH . I 6 HOH A 18 518 169 HOH HOH . I 6 HOH A 19 519 98 HOH HOH . I 6 HOH A 20 520 81 HOH HOH . I 6 HOH A 21 521 58 HOH HOH . I 6 HOH A 22 522 51 HOH HOH . I 6 HOH A 23 523 95 HOH HOH . I 6 HOH A 24 524 104 HOH HOH . I 6 HOH A 25 525 115 HOH HOH . I 6 HOH A 26 526 139 HOH HOH . I 6 HOH A 27 527 73 HOH HOH . I 6 HOH A 28 528 44 HOH HOH . I 6 HOH A 29 529 37 HOH HOH . I 6 HOH A 30 530 118 HOH HOH . I 6 HOH A 31 531 67 HOH HOH . I 6 HOH A 32 532 45 HOH HOH . I 6 HOH A 33 533 62 HOH HOH . I 6 HOH A 34 534 129 HOH HOH . I 6 HOH A 35 535 76 HOH HOH . I 6 HOH A 36 536 90 HOH HOH . I 6 HOH A 37 537 79 HOH HOH . I 6 HOH A 38 538 146 HOH HOH . I 6 HOH A 39 539 69 HOH HOH . I 6 HOH A 40 540 165 HOH HOH . I 6 HOH A 41 541 78 HOH HOH . I 6 HOH A 42 542 162 HOH HOH . I 6 HOH A 43 543 120 HOH HOH . I 6 HOH A 44 544 87 HOH HOH . I 6 HOH A 45 545 93 HOH HOH . I 6 HOH A 46 546 26 HOH HOH . I 6 HOH A 47 547 75 HOH HOH . I 6 HOH A 48 548 60 HOH HOH . I 6 HOH A 49 549 170 HOH HOH . I 6 HOH A 50 550 166 HOH HOH . I 6 HOH A 51 551 167 HOH HOH . I 6 HOH A 52 552 144 HOH HOH . I 6 HOH A 53 553 74 HOH HOH . I 6 HOH A 54 554 106 HOH HOH . I 6 HOH A 55 555 100 HOH HOH . I 6 HOH A 56 556 80 HOH HOH . I 6 HOH A 57 557 132 HOH HOH . I 6 HOH A 58 558 71 HOH HOH . I 6 HOH A 59 559 68 HOH HOH . I 6 HOH A 60 560 46 HOH HOH . I 6 HOH A 61 561 61 HOH HOH . I 6 HOH A 62 562 138 HOH HOH . I 6 HOH A 63 563 49 HOH HOH . I 6 HOH A 64 564 59 HOH HOH . I 6 HOH A 65 565 159 HOH HOH . I 6 HOH A 66 566 101 HOH HOH . I 6 HOH A 67 567 52 HOH HOH . I 6 HOH A 68 568 50 HOH HOH . I 6 HOH A 69 569 92 HOH HOH . I 6 HOH A 70 570 56 HOH HOH . I 6 HOH A 71 571 154 HOH HOH . I 6 HOH A 72 572 89 HOH HOH . I 6 HOH A 73 573 70 HOH HOH . I 6 HOH A 74 574 55 HOH HOH . I 6 HOH A 75 575 54 HOH HOH . I 6 HOH A 76 576 97 HOH HOH . I 6 HOH A 77 577 83 HOH HOH . I 6 HOH A 78 578 111 HOH HOH . I 6 HOH A 79 579 102 HOH HOH . I 6 HOH A 80 580 85 HOH HOH . I 6 HOH A 81 581 72 HOH HOH . I 6 HOH A 82 582 145 HOH HOH . I 6 HOH A 83 583 77 HOH HOH . I 6 HOH A 84 584 31 HOH HOH . I 6 HOH A 85 585 131 HOH HOH . J 6 HOH B 1 501 103 HOH HOH . J 6 HOH B 2 502 66 HOH HOH . J 6 HOH B 3 503 18 HOH HOH . J 6 HOH B 4 504 179 HOH HOH . J 6 HOH B 5 505 30 HOH HOH . J 6 HOH B 6 506 2 HOH HOH . J 6 HOH B 7 507 109 HOH HOH . J 6 HOH B 8 508 17 HOH HOH . J 6 HOH B 9 509 176 HOH HOH . J 6 HOH B 10 510 82 HOH HOH . J 6 HOH B 11 511 6 HOH HOH . J 6 HOH B 12 512 16 HOH HOH . J 6 HOH B 13 513 20 HOH HOH . J 6 HOH B 14 514 178 HOH HOH . J 6 HOH B 15 515 9 HOH HOH . J 6 HOH B 16 516 133 HOH HOH . J 6 HOH B 17 517 35 HOH HOH . J 6 HOH B 18 518 28 HOH HOH . J 6 HOH B 19 519 42 HOH HOH . J 6 HOH B 20 520 4 HOH HOH . J 6 HOH B 21 521 151 HOH HOH . J 6 HOH B 22 522 123 HOH HOH . J 6 HOH B 23 523 84 HOH HOH . J 6 HOH B 24 524 43 HOH HOH . J 6 HOH B 25 525 160 HOH HOH . J 6 HOH B 26 526 128 HOH HOH . J 6 HOH B 27 527 29 HOH HOH . J 6 HOH B 28 528 150 HOH HOH . J 6 HOH B 29 529 130 HOH HOH . J 6 HOH B 30 530 15 HOH HOH . J 6 HOH B 31 531 96 HOH HOH . J 6 HOH B 32 532 107 HOH HOH . J 6 HOH B 33 533 12 HOH HOH . J 6 HOH B 34 534 141 HOH HOH . J 6 HOH B 35 535 8 HOH HOH . J 6 HOH B 36 536 122 HOH HOH . J 6 HOH B 37 537 88 HOH HOH . J 6 HOH B 38 538 161 HOH HOH . J 6 HOH B 39 539 125 HOH HOH . J 6 HOH B 40 540 40 HOH HOH . J 6 HOH B 41 541 36 HOH HOH . J 6 HOH B 42 542 38 HOH HOH . J 6 HOH B 43 543 121 HOH HOH . J 6 HOH B 44 544 1 HOH HOH . J 6 HOH B 45 545 39 HOH HOH . J 6 HOH B 46 546 153 HOH HOH . J 6 HOH B 47 547 48 HOH HOH . J 6 HOH B 48 548 168 HOH HOH . J 6 HOH B 49 549 172 HOH HOH . J 6 HOH B 50 550 10 HOH HOH . J 6 HOH B 51 551 155 HOH HOH . J 6 HOH B 52 552 47 HOH HOH . J 6 HOH B 53 553 19 HOH HOH . J 6 HOH B 54 554 171 HOH HOH . J 6 HOH B 55 555 25 HOH HOH . J 6 HOH B 56 556 13 HOH HOH . J 6 HOH B 57 557 156 HOH HOH . J 6 HOH B 58 558 22 HOH HOH . J 6 HOH B 59 559 143 HOH HOH . J 6 HOH B 60 560 11 HOH HOH . J 6 HOH B 61 561 152 HOH HOH . J 6 HOH B 62 562 91 HOH HOH . J 6 HOH B 63 563 108 HOH HOH . J 6 HOH B 64 564 119 HOH HOH . J 6 HOH B 65 565 7 HOH HOH . J 6 HOH B 66 566 126 HOH HOH . J 6 HOH B 67 567 164 HOH HOH . J 6 HOH B 68 568 41 HOH HOH . J 6 HOH B 69 569 105 HOH HOH . J 6 HOH B 70 570 14 HOH HOH . J 6 HOH B 71 571 173 HOH HOH . J 6 HOH B 72 572 110 HOH HOH . J 6 HOH B 73 573 147 HOH HOH . J 6 HOH B 74 574 5 HOH HOH . J 6 HOH B 75 575 148 HOH HOH . J 6 HOH B 76 576 34 HOH HOH . J 6 HOH B 77 577 163 HOH HOH . J 6 HOH B 78 578 112 HOH HOH . J 6 HOH B 79 579 33 HOH HOH . J 6 HOH B 80 580 142 HOH HOH . J 6 HOH B 81 581 27 HOH HOH . J 6 HOH B 82 582 149 HOH HOH . J 6 HOH B 83 583 23 HOH HOH . J 6 HOH B 84 584 157 HOH HOH . J 6 HOH B 85 585 3 HOH HOH . J 6 HOH B 86 586 158 HOH HOH . J 6 HOH B 87 587 53 HOH HOH . J 6 HOH B 88 588 174 HOH HOH . J 6 HOH B 89 589 32 HOH HOH . J 6 HOH B 90 590 86 HOH HOH . J 6 HOH B 91 591 24 HOH HOH . J 6 HOH B 92 592 134 HOH HOH . J 6 HOH B 93 593 21 HOH HOH . J 6 HOH B 94 594 180 HOH HOH . J 6 HOH B 95 595 94 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 4 16.266 9.777 19.107 1 68.53 ? C1 GOL 403 A 1 HETATM 2 O O1 GOL . . . E 4 16.628 10.058 20.452 1 71.41 ? O1 GOL 403 A 1 HETATM 3 C C2 GOL . . . E 4 16.248 8.26 19.04 1 61.15 ? C2 GOL 403 A 1 HETATM 4 O O2 GOL . . . E 4 15.033 7.811 18.428 1 67.09 ? O2 GOL 403 A 1 HETATM 5 C C3 GOL . . . E 4 17.434 7.62 18.339 1 62.33 ? C3 GOL 403 A 1 HETATM 6 O O3 GOL . . . E 4 18.521 7.541 19.266 1 55.16 ? O3 GOL 403 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #