data_6BQD # _model_server_result.job_id lcdkaz2Zjm03IVv55gDwqA _model_server_result.datetime_utc '2024-11-18 01:23:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6bqd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1701}' # _entry.id 6BQD # _exptl.entry_id 6BQD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 335.4 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-{6-[(2E)-but-2-en-1-yl]-7-oxo-6,7-dihydro-1H-pyrrolo[2,3-c]pyridin-4-yl}-N,N-dimethylbenzamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.39 _cell.angle_gamma 90 _cell.entry_id 6BQD _cell.length_a 128.553 _cell.length_b 42.51 _cell.length_c 63.372 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BQD _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C20 H21 N3 O2' _chem_comp.formula_weight 335.4 _chem_comp.id 69G _chem_comp.mon_nstd_flag . _chem_comp.name 3-{6-[(2E)-but-2-en-1-yl]-7-oxo-6,7-dihydro-1H-pyrrolo[2,3-c]pyridin-4-yl}-N,N-dimethylbenzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C25 N24 69G sing 1 n n N24 C26 69G sing 2 n n N24 C22 69G sing 3 n n O23 C22 69G doub 4 n n C22 C20 69G sing 5 n n C10 N11 69G sing 6 n y C10 C9 69G doub 7 n y N11 C13 69G sing 8 n y C9 C8 69G sing 9 n y C21 C20 69G doub 10 n y C21 C16 69G sing 11 n y C20 C19 69G sing 12 n y C13 C8 69G doub 13 n y C13 C14 69G sing 14 n n C8 C7 69G sing 15 n n O15 C14 69G doub 16 n n C14 N5 69G sing 17 n n C7 C16 69G sing 18 n n C7 C6 69G doub 19 n n C16 C17 69G doub 20 n y C19 C18 69G doub 21 n y N5 C6 69G sing 22 n n N5 C4 69G sing 23 n n C17 C18 69G sing 24 n y C4 C3 69G sing 25 n n C3 C2 69G doub 26 e n C2 C1 69G sing 27 n n C4 H1 69G sing 28 n n C4 H2 69G sing 29 n n C6 H3 69G sing 30 n n C9 H4 69G sing 31 n n C10 H5 69G sing 32 n n C3 H6 69G sing 33 n n C1 H7 69G sing 34 n n C1 H8 69G sing 35 n n C1 H9 69G sing 36 n n C2 H10 69G sing 37 n n N11 H12 69G sing 38 n n C17 H11 69G sing 39 n n C18 H13 69G sing 40 n n C19 H14 69G sing 41 n n C21 H15 69G sing 42 n n C25 H16 69G sing 43 n n C25 H17 69G sing 44 n n C25 H18 69G sing 45 n n C26 H19 69G sing 46 n n C26 H20 69G sing 47 n n C26 H21 69G sing 48 n n # _atom_sites.entry_id 6BQD _atom_sites.fract_transf_matrix[1][1] 0.007779 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001852 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023524 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016221 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 69G A 1 1701 1 69G DRG . D 2 69G B 1 1701 2 69G DRG . E 3 HOH A 1 1801 45 HOH HOH . E 3 HOH A 2 1802 43 HOH HOH . E 3 HOH A 3 1803 6 HOH HOH . E 3 HOH A 4 1804 10 HOH HOH . E 3 HOH A 5 1805 2 HOH HOH . E 3 HOH A 6 1806 44 HOH HOH . E 3 HOH A 7 1807 3 HOH HOH . E 3 HOH A 8 1808 12 HOH HOH . E 3 HOH A 9 1809 31 HOH HOH . E 3 HOH A 10 1810 18 HOH HOH . E 3 HOH A 11 1811 21 HOH HOH . E 3 HOH A 12 1812 15 HOH HOH . E 3 HOH A 13 1813 50 HOH HOH . E 3 HOH A 14 1814 24 HOH HOH . E 3 HOH A 15 1815 41 HOH HOH . E 3 HOH A 16 1816 39 HOH HOH . E 3 HOH A 17 1817 33 HOH HOH . E 3 HOH A 18 1818 37 HOH HOH . E 3 HOH A 19 1819 1 HOH HOH . E 3 HOH A 20 1820 7 HOH HOH . E 3 HOH A 21 1821 11 HOH HOH . E 3 HOH A 22 1822 46 HOH HOH . E 3 HOH A 23 1823 25 HOH HOH . E 3 HOH A 24 1824 17 HOH HOH . E 3 HOH A 25 1825 40 HOH HOH . E 3 HOH A 26 1826 9 HOH HOH . E 3 HOH A 27 1827 19 HOH HOH . F 3 HOH B 1 1801 51 HOH HOH . F 3 HOH B 2 1802 14 HOH HOH . F 3 HOH B 3 1803 27 HOH HOH . F 3 HOH B 4 1804 30 HOH HOH . F 3 HOH B 5 1805 26 HOH HOH . F 3 HOH B 6 1806 5 HOH HOH . F 3 HOH B 7 1807 13 HOH HOH . F 3 HOH B 8 1808 20 HOH HOH . F 3 HOH B 9 1809 16 HOH HOH . F 3 HOH B 10 1810 34 HOH HOH . F 3 HOH B 11 1811 42 HOH HOH . F 3 HOH B 12 1812 32 HOH HOH . F 3 HOH B 13 1813 4 HOH HOH . F 3 HOH B 14 1814 28 HOH HOH . F 3 HOH B 15 1815 38 HOH HOH . F 3 HOH B 16 1816 36 HOH HOH . F 3 HOH B 17 1817 54 HOH HOH . F 3 HOH B 18 1818 8 HOH HOH . F 3 HOH B 19 1819 23 HOH HOH . F 3 HOH B 20 1820 29 HOH HOH . F 3 HOH B 21 1821 47 HOH HOH . F 3 HOH B 22 1822 48 HOH HOH . F 3 HOH B 23 1823 52 HOH HOH . F 3 HOH B 24 1824 22 HOH HOH . F 3 HOH B 25 1825 53 HOH HOH . F 3 HOH B 26 1826 49 HOH HOH . F 3 HOH B 27 1827 35 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 69G . . . D 2 1.127 -17.63 79.956 1 40.39 ? C4 69G 1701 B 1 HETATM 2 C C14 69G . . . D 2 1.516 -17.723 82.397 1 40.39 ? C14 69G 1701 B 1 HETATM 3 C C6 69G . . . D 2 0.919 -19.683 81.241 1 41.62 ? C6 69G 1701 B 1 HETATM 4 C C7 69G . . . D 2 0.934 -20.455 82.375 1 43.17 ? C7 69G 1701 B 1 HETATM 5 C C8 69G . . . D 2 1.241 -19.814 83.636 1 40.94 ? C8 69G 1701 B 1 HETATM 6 C C9 69G . . . D 2 1.346 -20.262 84.965 1 39.82 ? C9 69G 1701 B 1 HETATM 7 C C10 69G . . . D 2 1.693 -19.173 85.697 1 40.07 ? C10 69G 1701 B 1 HETATM 8 C C13 69G . . . D 2 1.552 -18.441 83.611 1 39.52 ? C13 69G 1701 B 1 HETATM 9 C C3 69G . . . D 2 -0.249 -17.25 79.471 1 41.01 ? C3 69G 1701 B 1 HETATM 10 C C1 69G . . . D 2 -2.098 -17.389 77.765 1 40.66 ? C1 69G 1701 B 1 HETATM 11 C C2 69G . . . D 2 -0.709 -17.736 78.324 1 42.06 ? C2 69G 1701 B 1 HETATM 12 N N5 69G . . . D 2 1.17 -18.346 81.246 1 40.91 ? N5 69G 1701 B 1 HETATM 13 N N11 69G . . . D 2 1.847 -18.075 84.897 1 38.65 ? N11 69G 1701 B 1 HETATM 14 O O15 69G . . . D 2 1.764 -16.517 82.44 1 39.59 ? O15 69G 1701 B 1 HETATM 15 C C16 69G . . . D 2 0.703 -21.934 82.331 1 45.64 ? C16 69G 1701 B 1 HETATM 16 C C17 69G . . . D 2 1.431 -22.77 83.173 1 46.75 ? C17 69G 1701 B 1 HETATM 17 C C18 69G . . . D 2 1.244 -24.139 83.154 1 47.94 ? C18 69G 1701 B 1 HETATM 18 C C19 69G . . . D 2 0.325 -24.705 82.293 1 48.01 ? C19 69G 1701 B 1 HETATM 19 C C20 69G . . . D 2 -0.403 -23.881 81.43 1 48.09 ? C20 69G 1701 B 1 HETATM 20 C C21 69G . . . D 2 -0.226 -22.493 81.448 1 47.06 ? C21 69G 1701 B 1 HETATM 21 C C22 69G . . . D 2 -1.397 -24.435 80.507 1 48.93 ? C22 69G 1701 B 1 HETATM 22 O O23 69G . . . D 2 -2.567 -24.344 80.838 1 48.96 ? O23 69G 1701 B 1 HETATM 23 N N24 69G . . . D 2 -1.016 -24.994 79.33 1 49.16 ? N24 69G 1701 B 1 HETATM 24 C C25 69G . . . D 2 0.388 -25.057 78.962 1 48.95 ? C25 69G 1701 B 1 HETATM 25 C C26 69G . . . D 2 -2.01 -25.512 78.395 1 49.31 ? C26 69G 1701 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 25 #