data_6BQH # _model_server_result.job_id gIXOG2Q9ZcCzT_vogE9seQ _model_server_result.datetime_utc '2024-11-23 05:47:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6bqh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1201}' # _entry.id 6BQH # _exptl.entry_id 6BQH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 477.569 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 6-(2-{4-[bis(4-fluorophenyl)methylidene]piperidin-1-yl}ethyl)-7-methyl-5H-[1,3]thiazolo[3,2-a]pyrimidin-5-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6BQH _cell.length_a 88.31 _cell.length_b 97.05 _cell.length_c 150.23 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BQH _symmetry.cell_setting ? _symmetry.Int_Tables_number 21 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 114 A CYS 127 1_555 A SG CYS 194 A CYS 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 A SG CYS 375 A CYS 337 1_555 A SG CYS 379 A CYS 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? # _chem_comp.formula 'C27 H25 F2 N3 O S' _chem_comp.formula_weight 477.569 _chem_comp.id E2J _chem_comp.mon_nstd_flag . _chem_comp.name 6-(2-{4-[bis(4-fluorophenyl)methylidene]piperidin-1-yl}ethyl)-7-methyl-5H-[1,3]thiazolo[3,2-a]pyrimidin-5-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Ritanserin # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F32 C29 E2J sing 83 n n C29 C28 E2J doub 84 n y C29 C30 E2J sing 85 n y C28 C27 E2J sing 86 n y C30 C31 E2J doub 87 n y C27 C26 E2J doub 88 n y C31 C26 E2J sing 89 n y C26 C18 E2J sing 90 n n C18 C19 E2J sing 91 n n C18 C17 E2J doub 92 n n C16 C17 E2J sing 93 n n C16 C15 E2J sing 94 n n C24 C19 E2J doub 95 n y C24 C23 E2J sing 96 n y C19 C20 E2J sing 97 n y C17 C33 E2J sing 98 n n C23 C22 E2J doub 99 n y C15 N14 E2J sing 100 n n C20 C21 E2J doub 101 n y C22 C21 E2J sing 102 n y C22 F25 E2J sing 103 n n C33 C34 E2J sing 104 n n N14 C34 E2J sing 105 n n N14 C13 E2J sing 106 n n C13 C12 E2J sing 107 n n C01 C02 E2J sing 108 n n C12 C03 E2J sing 109 n n C02 C03 E2J doub 110 n n C02 N11 E2J sing 111 n n C03 C04 E2J sing 112 n n N11 C10 E2J doub 113 n n C04 O05 E2J doub 114 n n C04 N06 E2J sing 115 n n C10 N06 E2J sing 116 n n C10 S09 E2J sing 117 n n N06 C07 E2J sing 118 n n C07 C08 E2J doub 119 n n S09 C08 E2J sing 120 n n C12 H1 E2J sing 121 n n C12 H2 E2J sing 122 n n C13 H3 E2J sing 123 n n C13 H4 E2J sing 124 n n C15 H5 E2J sing 125 n n C15 H6 E2J sing 126 n n C28 H7 E2J sing 127 n n C31 H8 E2J sing 128 n n C33 H9 E2J sing 129 n n C33 H10 E2J sing 130 n n C34 H11 E2J sing 131 n n C34 H12 E2J sing 132 n n C21 H13 E2J sing 133 n n C01 H14 E2J sing 134 n n C01 H15 E2J sing 135 n n C01 H16 E2J sing 136 n n C07 H18 E2J sing 137 n n C08 H19 E2J sing 138 n n C16 H21 E2J sing 139 n n C16 H22 E2J sing 140 n n C20 H23 E2J sing 141 n n C23 H24 E2J sing 142 n n C24 H25 E2J sing 143 n n C27 H26 E2J sing 144 n n C30 H27 E2J sing 145 n n # _atom_sites.entry_id 6BQH _atom_sites.fract_transf_matrix[1][1] 0.011324 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010304 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006656 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 E2J A 1 1201 2 E2J RIT . C 3 OLC A 1 1202 1 OLC OLC . D 3 OLC A 1 1203 2 OLC OLC . E 3 OLC A 1 1204 3 OLC OLC . F 3 OLC A 1 1205 4 OLC OLC . G 3 OLC A 1 1206 5 OLC OLC . H 3 OLC A 1 1207 6 OLC OLC . I 4 PEG A 1 1208 1 PEG PEG . J 5 OLA A 1 1209 1 OLA OLA . K 5 OLA A 1 1210 2 OLA OLA . L 6 HOH A 1 1301 3 HOH HOH . L 6 HOH A 2 1302 1 HOH HOH . L 6 HOH A 3 1303 4 HOH HOH . L 6 HOH A 4 1304 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 E2J . . . B 2 39.372 36.092 61.609 1 95.03 ? C10 E2J 1201 A 1 HETATM 2 N N11 E2J . . . B 2 38.39 36.423 60.816 1 94.94 ? N11 E2J 1201 A 1 HETATM 3 C C12 E2J . . . B 2 37.658 33.183 59.16 1 77.25 ? C12 E2J 1201 A 1 HETATM 4 C C13 E2J . . . B 2 38.532 33.077 57.911 1 79.34 ? C13 E2J 1201 A 1 HETATM 5 C C15 E2J . . . B 2 38.44 32.363 55.619 1 94.24 ? C15 E2J 1201 A 1 HETATM 6 C C26 E2J . . . B 2 38.982 29.2 52.965 1 101.64 ? C26 E2J 1201 A 1 HETATM 7 C C28 E2J . . . B 2 38.951 28.514 50.657 1 97.96 ? C28 E2J 1201 A 1 HETATM 8 C C31 E2J . . . B 2 39.995 30.113 52.664 1 97.85 ? C31 E2J 1201 A 1 HETATM 9 C C33 E2J . . . B 2 37.583 29.742 56.557 1 88.58 ? C33 E2J 1201 A 1 HETATM 10 C C34 E2J . . . B 2 38.358 30.749 57.408 1 77.26 ? C34 E2J 1201 A 1 HETATM 11 C C19 E2J . . . B 2 38.551 27.657 54.936 1 80.8 ? C19 E2J 1201 A 1 HETATM 12 C C18 E2J . . . B 2 38.463 29.023 54.352 1 95.96 ? C18 E2J 1201 A 1 HETATM 13 C C21 E2J . . . B 2 39.743 25.984 56.183 1 93.61 ? C21 E2J 1201 A 1 HETATM 14 C C01 E2J . . . B 2 36.683 35.965 59.133 1 71.62 ? C01 E2J 1201 A 1 HETATM 15 C C02 E2J . . . B 2 37.816 35.532 60.025 1 71.62 ? C02 E2J 1201 A 1 HETATM 16 C C03 E2J . . . B 2 38.274 34.229 60.05 1 77.66 ? C03 E2J 1201 A 1 HETATM 17 C C04 E2J . . . B 2 39.327 33.877 60.895 1 75.94 ? C04 E2J 1201 A 1 HETATM 18 O O05 E2J . . . B 2 39.731 32.723 60.911 1 71.62 ? O05 E2J 1201 A 1 HETATM 19 N N06 E2J . . . B 2 39.895 34.829 61.701 1 89.09 ? N06 E2J 1201 A 1 HETATM 20 C C07 E2J . . . B 2 40.931 34.664 62.592 1 90.99 ? C07 E2J 1201 A 1 HETATM 21 C C08 E2J . . . B 2 41.387 35.688 63.316 1 83.02 ? C08 E2J 1201 A 1 HETATM 22 S S09 E2J . . . B 2 40.338 37.028 62.769 1 94.43 ? S09 E2J 1201 A 1 HETATM 23 N N14 E2J . . . B 2 37.959 32.097 56.983 1 94.64 1 N14 E2J 1201 A 1 HETATM 24 C C16 E2J . . . B 2 37.717 31.434 54.636 1 88.78 ? C16 E2J 1201 A 1 HETATM 25 C C17 E2J . . . B 2 37.932 30.008 55.107 1 91.37 ? C17 E2J 1201 A 1 HETATM 26 C C20 E2J . . . B 2 39.683 27.256 55.651 1 83.87 ? C20 E2J 1201 A 1 HETATM 27 C C22 E2J . . . B 2 38.687 25.101 56.003 1 93.9 ? C22 E2J 1201 A 1 HETATM 28 C C23 E2J . . . B 2 37.565 25.491 55.29 1 85.64 ? C23 E2J 1201 A 1 HETATM 29 C C24 E2J . . . B 2 37.496 26.761 54.755 1 81.86 ? C24 E2J 1201 A 1 HETATM 30 F F25 E2J . . . B 2 38.747 23.857 56.524 1 91.4 ? F25 E2J 1201 A 1 HETATM 31 C C27 E2J . . . B 2 38.475 28.393 51.947 1 101.35 ? C27 E2J 1201 A 1 HETATM 32 C C29 E2J . . . B 2 39.944 29.434 50.364 1 99.24 ? C29 E2J 1201 A 1 HETATM 33 C C30 E2J . . . B 2 40.463 30.233 51.371 1 99.41 ? C30 E2J 1201 A 1 HETATM 34 F F32 E2J . . . B 2 40.405 29.55 49.099 1 94.85 ? F32 E2J 1201 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 34 #