data_6BQP
#
_model_server_result.job_id            zXXFNize2Ua4tU8hZI5n8Q 
_model_server_result.datetime_utc      '2024-11-14 18:40:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6bqp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
#
_entry.id    6BQP 
#
_exptl.entry_id    6BQP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              443.541 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-(2-{5-[(3-Methyloxetan-3-yl)methoxy]-1H-benzimidazol-1-yl}quinolin-8-yl)piperidin-4-amine 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6BQP 
_cell.length_a            49.113 
_cell.length_b            77.834 
_cell.length_c            78.709 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6BQP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C26 H29 N5 O2' 
_chem_comp.formula_weight    443.541 
_chem_comp.id                6T2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-(2-{5-[(3-Methyloxetan-3-yl)methoxy]-1H-benzimidazol-1-yl}quinolin-8-yl)piperidin-4-amine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     Crenolanib 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O2 C26 6T2 sing 1 n n 
O2 C24 6T2 sing 2 n n 
C26 C23 6T2 sing 3 n n 
C24 C23 6T2 sing 4 n n 
C23 C5 6T2 sing 5 n n 
C23 C27 6T2 sing 6 n n 
C5 O1 6T2 sing 7 n n 
N80 C50 6T2 sing 8 n n 
O1 C13 6T2 sing 9 n n 
C40 C50 6T2 sing 10 n n 
C40 C30 6T2 sing 11 n n 
C13 C18 6T2 doub 12 n y 
C13 C12 6T2 sing 13 n y 
C18 C19 6T2 sing 14 n y 
C50 C60 6T2 sing 15 n n 
C12 C10 6T2 doub 16 n y 
C19 C9 6T2 doub 17 n y 
C30 N4 6T2 sing 18 n n 
C10 C9 6T2 sing 19 n y 
C10 N2 6T2 sing 20 n y 
C60 C70 6T2 sing 21 n n 
C9 N1 6T2 sing 22 n y 
N4 C70 6T2 sing 23 n n 
N4 C11 6T2 sing 24 n n 
N2 C1 6T2 doub 25 n y 
N1 C1 6T2 sing 26 n y 
N1 C2 6T2 sing 27 n n 
N3 C2 6T2 doub 28 n y 
N3 C7 6T2 sing 29 n y 
C11 C7 6T2 doub 30 n y 
C11 C14 6T2 sing 31 n y 
C2 C3 6T2 sing 32 n y 
C7 C6 6T2 sing 33 n y 
C14 C15 6T2 doub 34 n y 
C3 C4 6T2 doub 35 n y 
C6 C4 6T2 sing 36 n y 
C6 C16 6T2 doub 37 n y 
C15 C16 6T2 sing 38 n y 
C1 H1 6T2 sing 39 n n 
C3 H2 6T2 sing 40 n n 
C4 H3 6T2 sing 41 n n 
C5 H4 6T2 sing 42 n n 
C5 H5 6T2 sing 43 n n 
C12 H6 6T2 sing 44 n n 
C14 H7 6T2 sing 45 n n 
C15 H8 6T2 sing 46 n n 
C30 H9 6T2 sing 47 n n 
C30 H10 6T2 sing 48 n n 
C40 H11 6T2 sing 49 n n 
C40 H12 6T2 sing 50 n n 
C50 H13 6T2 sing 51 n n 
N80 H14 6T2 sing 52 n n 
N80 H15 6T2 sing 53 n n 
C60 H17 6T2 sing 54 n n 
C60 H18 6T2 sing 55 n n 
C70 H19 6T2 sing 56 n n 
C70 H20 6T2 sing 57 n n 
C16 H21 6T2 sing 58 n n 
C19 H22 6T2 sing 59 n n 
C18 H23 6T2 sing 60 n n 
C27 H24 6T2 sing 61 n n 
C27 H25 6T2 sing 62 n n 
C27 H26 6T2 sing 63 n n 
C24 H27 6T2 sing 64 n n 
C24 H28 6T2 sing 65 n n 
C26 H29 6T2 sing 66 n n 
C26 H30 6T2 sing 67 n n 
#
_atom_sites.entry_id                     6BQP 
_atom_sites.fract_transf_matrix[1][1]    0.020361 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012848 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012705 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 6T2 A 1 501 600 6T2 DRG . 
C 3 EDO A 1 502 1 EDO EDO . 
D 4 HOH A 1 601 70 HOH HOH . 
D 4 HOH A 2 602 37 HOH HOH . 
D 4 HOH A 3 603 98 HOH HOH . 
D 4 HOH A 4 604 85 HOH HOH . 
D 4 HOH A 5 605 67 HOH HOH . 
D 4 HOH A 6 606 68 HOH HOH . 
D 4 HOH A 7 607 58 HOH HOH . 
D 4 HOH A 8 608 81 HOH HOH . 
D 4 HOH A 9 609 62 HOH HOH . 
D 4 HOH A 10 610 88 HOH HOH . 
D 4 HOH A 11 611 45 HOH HOH . 
D 4 HOH A 12 612 24 HOH HOH . 
D 4 HOH A 13 613 31 HOH HOH . 
D 4 HOH A 14 614 38 HOH HOH . 
D 4 HOH A 15 615 100 HOH HOH . 
D 4 HOH A 16 616 15 HOH HOH . 
D 4 HOH A 17 617 74 HOH HOH . 
D 4 HOH A 18 618 27 HOH HOH . 
D 4 HOH A 19 619 65 HOH HOH . 
D 4 HOH A 20 620 64 HOH HOH . 
D 4 HOH A 21 621 72 HOH HOH . 
D 4 HOH A 22 622 29 HOH HOH . 
D 4 HOH A 23 623 33 HOH HOH . 
D 4 HOH A 24 624 7 HOH HOH . 
D 4 HOH A 25 625 56 HOH HOH . 
D 4 HOH A 26 626 22 HOH HOH . 
D 4 HOH A 27 627 99 HOH HOH . 
D 4 HOH A 28 628 97 HOH HOH . 
D 4 HOH A 29 629 20 HOH HOH . 
D 4 HOH A 30 630 42 HOH HOH . 
D 4 HOH A 31 631 40 HOH HOH . 
D 4 HOH A 32 632 87 HOH HOH . 
D 4 HOH A 33 633 69 HOH HOH . 
D 4 HOH A 34 634 78 HOH HOH . 
D 4 HOH A 35 635 50 HOH HOH . 
D 4 HOH A 36 636 11 HOH HOH . 
D 4 HOH A 37 637 94 HOH HOH . 
D 4 HOH A 38 638 57 HOH HOH . 
D 4 HOH A 39 639 41 HOH HOH . 
D 4 HOH A 40 640 8 HOH HOH . 
D 4 HOH A 41 641 34 HOH HOH . 
D 4 HOH A 42 642 9 HOH HOH . 
D 4 HOH A 43 643 73 HOH HOH . 
D 4 HOH A 44 644 52 HOH HOH . 
D 4 HOH A 45 645 95 HOH HOH . 
D 4 HOH A 46 646 32 HOH HOH . 
D 4 HOH A 47 647 21 HOH HOH . 
D 4 HOH A 48 648 13 HOH HOH . 
D 4 HOH A 49 649 60 HOH HOH . 
D 4 HOH A 50 650 16 HOH HOH . 
D 4 HOH A 51 651 76 HOH HOH . 
D 4 HOH A 52 652 82 HOH HOH . 
D 4 HOH A 53 653 14 HOH HOH . 
D 4 HOH A 54 654 5 HOH HOH . 
D 4 HOH A 55 655 25 HOH HOH . 
D 4 HOH A 56 656 36 HOH HOH . 
D 4 HOH A 57 657 30 HOH HOH . 
D 4 HOH A 58 658 63 HOH HOH . 
D 4 HOH A 59 659 26 HOH HOH . 
D 4 HOH A 60 660 80 HOH HOH . 
D 4 HOH A 61 661 43 HOH HOH . 
D 4 HOH A 62 662 79 HOH HOH . 
D 4 HOH A 63 663 59 HOH HOH . 
D 4 HOH A 64 664 35 HOH HOH . 
D 4 HOH A 65 665 2 HOH HOH . 
D 4 HOH A 66 666 46 HOH HOH . 
D 4 HOH A 67 667 77 HOH HOH . 
D 4 HOH A 68 668 17 HOH HOH . 
D 4 HOH A 69 669 86 HOH HOH . 
D 4 HOH A 70 670 75 HOH HOH . 
D 4 HOH A 71 671 3 HOH HOH . 
D 4 HOH A 72 672 28 HOH HOH . 
D 4 HOH A 73 673 48 HOH HOH . 
D 4 HOH A 74 674 61 HOH HOH . 
D 4 HOH A 75 675 6 HOH HOH . 
D 4 HOH A 76 676 92 HOH HOH . 
D 4 HOH A 77 677 53 HOH HOH . 
D 4 HOH A 78 678 39 HOH HOH . 
D 4 HOH A 79 679 83 HOH HOH . 
D 4 HOH A 80 680 93 HOH HOH . 
D 4 HOH A 81 681 55 HOH HOH . 
D 4 HOH A 82 682 4 HOH HOH . 
D 4 HOH A 83 683 89 HOH HOH . 
D 4 HOH A 84 684 49 HOH HOH . 
D 4 HOH A 85 685 44 HOH HOH . 
D 4 HOH A 86 686 1 HOH HOH . 
D 4 HOH A 87 687 71 HOH HOH . 
D 4 HOH A 88 688 66 HOH HOH . 
D 4 HOH A 89 689 90 HOH HOH . 
D 4 HOH A 90 690 51 HOH HOH . 
D 4 HOH A 91 691 18 HOH HOH . 
D 4 HOH A 92 692 91 HOH HOH . 
D 4 HOH A 93 693 47 HOH HOH . 
D 4 HOH A 94 694 19 HOH HOH . 
D 4 HOH A 95 695 84 HOH HOH . 
D 4 HOH A 96 696 23 HOH HOH . 
D 4 HOH A 97 697 54 HOH HOH . 
D 4 HOH A 98 698 96 HOH HOH . 
D 4 HOH A 99 699 12 HOH HOH . 
D 4 HOH A 100 700 10 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 6T2 . . . B 2 -3.35 3.42 23.221 1 27.03 ? C1 6T2 501 A 1 
HETATM 2 C C2 6T2 . . . B 2 -2.019 5.314 24.119 1 27.59 ? C2 6T2 501 A 1 
HETATM 3 C C3 6T2 . . . B 2 -3.132 6.101 24.412 1 30.26 ? C3 6T2 501 A 1 
HETATM 4 C C4 6T2 . . . B 2 -2.951 7.365 24.885 1 29.55 ? C4 6T2 501 A 1 
HETATM 5 C C5 6T2 . . . B 2 0.131 -1.865 23.548 1 41.24 ? C5 6T2 501 A 1 
HETATM 6 C C6 6T2 . . . B 2 -1.655 7.869 25.041 1 29.55 ? C6 6T2 501 A 1 
HETATM 7 C C7 6T2 . . . B 2 -0.571 7.03 24.704 1 28.03 ? C7 6T2 501 A 1 
HETATM 8 C C9 6T2 . . . B 2 -1.248 2.941 23.755 1 27.39 ? C9 6T2 501 A 1 
HETATM 9 C C10 6T2 . . . B 2 -1.908 1.818 23.273 1 28.24 ? C10 6T2 501 A 1 
HETATM 10 C C11 6T2 . . . B 2 0.749 7.517 24.866 1 29.67 ? C11 6T2 501 A 1 
HETATM 11 C C12 6T2 . . . B 2 -1.237 0.597 23.165 1 31.05 ? C12 6T2 501 A 1 
HETATM 12 C C13 6T2 . . . B 2 0.08 0.541 23.573 1 31.02 ? C13 6T2 501 A 1 
HETATM 13 C C14 6T2 . . . B 2 0.936 8.823 25.316 1 30.98 ? C14 6T2 501 A 1 
HETATM 14 C C15 6T2 . . . B 2 -0.154 9.634 25.655 1 27.17 ? C15 6T2 501 A 1 
HETATM 15 C C30 6T2 . . . B 2 3.157 6.938 25.092 1 31.09 ? C30 6T2 501 A 1 
HETATM 16 C C40 6T2 . . . B 2 4.137 5.827 24.804 1 32.34 ? C40 6T2 501 A 1 
HETATM 17 C C50 6T2 . . . B 2 4.239 5.556 23.321 1 31.47 ? C50 6T2 501 A 1 
HETATM 18 N N80 6T2 . . . B 2 5.262 4.54 23.016 1 31.53 ? N80 6T2 501 A 1 
HETATM 19 C C60 6T2 . . . B 2 2.886 5.137 22.814 1 30.39 ? C60 6T2 501 A 1 
HETATM 20 C C70 6T2 . . . B 2 1.867 6.228 23.054 1 32.71 ? C70 6T2 501 A 1 
HETATM 21 N N4 6T2 . . . B 2 1.851 6.789 24.436 1 31.24 ? N4 6T2 501 A 1 
HETATM 22 N N3 6T2 . . . B 2 -0.792 5.761 24.247 1 29.28 ? N3 6T2 501 A 1 
HETATM 23 C C16 6T2 . . . B 2 -1.423 9.179 25.51 1 29 ? C16 6T2 501 A 1 
HETATM 24 N N1 6T2 . . . B 2 -2.184 3.968 23.696 1 26.88 ? N1 6T2 501 A 1 
HETATM 25 N N2 6T2 . . . B 2 -3.214 2.148 22.941 1 29.9 ? N2 6T2 501 A 1 
HETATM 26 C C19 6T2 . . . B 2 0.083 2.896 24.145 1 31.57 ? C19 6T2 501 A 1 
HETATM 27 C C18 6T2 . . . B 2 0.734 1.685 24.06 1 30.89 ? C18 6T2 501 A 1 
HETATM 28 O O1 6T2 . . . B 2 0.828 -0.609 23.523 1 34.81 ? O1 6T2 501 A 1 
HETATM 29 C C23 6T2 . . . B 2 1.103 -2.952 23.921 1 45.9 ? C23 6T2 501 A 1 
HETATM 30 C C27 6T2 . . . B 2 1.144 -3.179 25.421 1 44.63 ? C27 6T2 501 A 1 
HETATM 31 C C24 6T2 . . . B 2 0.962 -4.256 23.123 1 50.18 ? C24 6T2 501 A 1 
HETATM 32 O O2 6T2 . . . B 2 2.141 -3.913 22.339 1 54.13 ? O2 6T2 501 A 1 
HETATM 33 C C26 6T2 . . . B 2 2.497 -2.866 23.278 1 48.52 ? C26 6T2 501 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           366 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           33 
#