data_6BRC # _model_server_result.job_id NUj0rJ_RLqRDnGPPi1LwPw _model_server_result.datetime_utc '2024-10-19 17:27:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6brc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":501}' # _entry.id 6BRC # _exptl.entry_id 6BRC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 529.014 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-chloro-N~2~-{4-[4-(dimethylamino)piperidin-1-yl]-2-methoxyphenyl}-N~4~-[2-(dimethylphosphoryl)phenyl]pyrimidine-2,4-diamine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 72.38 _cell.angle_beta 78.35 _cell.angle_gamma 89.74 _cell.entry_id 6BRC _cell.length_a 54.8 _cell.length_b 54.861 _cell.length_c 56.633 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BRC _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,F 1 1 B,D,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C26 H34 Cl N6 O2 P' _chem_comp.formula_weight 529.014 _chem_comp.id E5J _chem_comp.mon_nstd_flag . _chem_comp.name 5-chloro-N~2~-{4-[4-(dimethylamino)piperidin-1-yl]-2-methoxyphenyl}-N~4~-[2-(dimethylphosphoryl)phenyl]pyrimidine-2,4-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C22 C24 E5J doub 83 n y C22 C16 E5J sing 84 n y C24 C23 E5J sing 85 n y CL1 C25 E5J sing 86 n n N4 C16 E5J sing 87 n n N4 C21 E5J sing 88 n n C23 C20 E5J doub 89 n y C16 C14 E5J doub 90 n y C19 P1 E5J sing 91 n n C20 C14 E5J sing 92 n y C21 C25 E5J doub 93 n y C21 N5 E5J sing 94 n y C25 C26 E5J sing 95 n y C14 P1 E5J sing 96 n n O2 P1 E5J doub 97 n n C2 C4 E5J sing 98 n n C2 C1 E5J sing 99 n n N5 C15 E5J doub 100 n y C26 N6 E5J doub 101 n y C7 N2 E5J sing 102 n n C17 O1 E5J sing 103 n n C4 N1 E5J sing 104 n n P1 C18 E5J sing 105 n n O1 C11 E5J sing 106 n n C15 N6 E5J sing 107 n y C15 N3 E5J sing 108 n n C11 C9 E5J doub 109 n y C11 C13 E5J sing 110 n y C9 C6 E5J sing 111 n y N3 C13 E5J sing 112 n n C13 C12 E5J doub 113 n y C8 N2 E5J sing 114 n n C6 N1 E5J sing 115 n n C6 C10 E5J doub 116 n y N1 C5 E5J sing 117 n n N2 C1 E5J sing 118 n n C12 C10 E5J sing 119 n y C1 C3 E5J sing 120 n n C3 C5 E5J sing 121 n n C4 H1 E5J sing 122 n n C4 H2 E5J sing 123 n n C5 H3 E5J sing 124 n n C5 H4 E5J sing 125 n n C7 H5 E5J sing 126 n n C7 H6 E5J sing 127 n n C7 H7 E5J sing 128 n n C8 H8 E5J sing 129 n n C8 H9 E5J sing 130 n n C8 H10 E5J sing 131 n n C9 H11 E5J sing 132 n n C10 H12 E5J sing 133 n n C12 H13 E5J sing 134 n n C3 H15 E5J sing 135 n n C3 H16 E5J sing 136 n n N3 H17 E5J sing 137 n n N4 H18 E5J sing 138 n n C1 H19 E5J sing 139 n n C2 H20 E5J sing 140 n n C2 H21 E5J sing 141 n n C17 H22 E5J sing 142 n n C17 H23 E5J sing 143 n n C17 H24 E5J sing 144 n n C18 H25 E5J sing 145 n n C18 H26 E5J sing 146 n n C18 H27 E5J sing 147 n n C19 H28 E5J sing 148 n n C19 H29 E5J sing 149 n n C19 H30 E5J sing 150 n n C20 H31 E5J sing 151 n n C22 H32 E5J sing 152 n n C23 H33 E5J sing 153 n n C24 H34 E5J sing 154 n n C26 H35 E5J sing 155 n n # _atom_sites.entry_id 6BRC _atom_sites.fract_transf_matrix[1][1] 0.018248 _atom_sites.fract_transf_matrix[1][2] -0.000083 _atom_sites.fract_transf_matrix[1][3] -0.003928 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018228 _atom_sites.fract_transf_matrix[2][3] -0.005903 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018951 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 E5J A 1 501 449 E5J DRG . D 2 E5J B 1 501 449 E5J DRG . E 3 NA B 1 502 1 NA NA . F 4 HOH A 1 601 28 HOH HOH . F 4 HOH A 2 602 72 HOH HOH . F 4 HOH A 3 603 23 HOH HOH . F 4 HOH A 4 604 47 HOH HOH . F 4 HOH A 5 605 83 HOH HOH . F 4 HOH A 6 606 66 HOH HOH . F 4 HOH A 7 607 5 HOH HOH . F 4 HOH A 8 608 6 HOH HOH . F 4 HOH A 9 609 31 HOH HOH . F 4 HOH A 10 610 46 HOH HOH . F 4 HOH A 11 611 80 HOH HOH . F 4 HOH A 12 612 19 HOH HOH . F 4 HOH A 13 613 82 HOH HOH . F 4 HOH A 14 614 11 HOH HOH . F 4 HOH A 15 615 51 HOH HOH . F 4 HOH A 16 616 29 HOH HOH . F 4 HOH A 17 617 21 HOH HOH . F 4 HOH A 18 618 32 HOH HOH . F 4 HOH A 19 619 61 HOH HOH . F 4 HOH A 20 620 53 HOH HOH . F 4 HOH A 21 621 50 HOH HOH . F 4 HOH A 22 622 67 HOH HOH . F 4 HOH A 23 623 27 HOH HOH . F 4 HOH A 24 624 22 HOH HOH . F 4 HOH A 25 625 40 HOH HOH . F 4 HOH A 26 626 9 HOH HOH . F 4 HOH A 27 627 4 HOH HOH . F 4 HOH A 28 628 17 HOH HOH . F 4 HOH A 29 629 84 HOH HOH . F 4 HOH A 30 630 70 HOH HOH . F 4 HOH A 31 631 60 HOH HOH . F 4 HOH A 32 632 56 HOH HOH . F 4 HOH A 33 633 10 HOH HOH . F 4 HOH A 34 634 24 HOH HOH . F 4 HOH A 35 635 58 HOH HOH . F 4 HOH A 36 636 38 HOH HOH . G 4 HOH B 1 601 8 HOH HOH . G 4 HOH B 2 602 71 HOH HOH . G 4 HOH B 3 603 33 HOH HOH . G 4 HOH B 4 604 34 HOH HOH . G 4 HOH B 5 605 69 HOH HOH . G 4 HOH B 6 606 2 HOH HOH . G 4 HOH B 7 607 65 HOH HOH . G 4 HOH B 8 608 43 HOH HOH . G 4 HOH B 9 609 54 HOH HOH . G 4 HOH B 10 610 26 HOH HOH . G 4 HOH B 11 611 57 HOH HOH . G 4 HOH B 12 612 49 HOH HOH . G 4 HOH B 13 613 37 HOH HOH . G 4 HOH B 14 614 35 HOH HOH . G 4 HOH B 15 615 41 HOH HOH . G 4 HOH B 16 616 81 HOH HOH . G 4 HOH B 17 617 55 HOH HOH . G 4 HOH B 18 618 25 HOH HOH . G 4 HOH B 19 619 1 HOH HOH . G 4 HOH B 20 620 78 HOH HOH . G 4 HOH B 21 621 7 HOH HOH . G 4 HOH B 22 622 44 HOH HOH . G 4 HOH B 23 623 45 HOH HOH . G 4 HOH B 24 624 36 HOH HOH . G 4 HOH B 25 625 20 HOH HOH . G 4 HOH B 26 626 63 HOH HOH . G 4 HOH B 27 627 48 HOH HOH . G 4 HOH B 28 628 30 HOH HOH . G 4 HOH B 29 629 39 HOH HOH . G 4 HOH B 30 630 42 HOH HOH . G 4 HOH B 31 631 62 HOH HOH . G 4 HOH B 32 632 64 HOH HOH . G 4 HOH B 33 633 74 HOH HOH . G 4 HOH B 34 634 52 HOH HOH . G 4 HOH B 35 635 77 HOH HOH . G 4 HOH B 36 636 12 HOH HOH . G 4 HOH B 37 637 14 HOH HOH . G 4 HOH B 38 638 59 HOH HOH . G 4 HOH B 39 639 76 HOH HOH . G 4 HOH B 40 640 3 HOH HOH . G 4 HOH B 41 641 18 HOH HOH . G 4 HOH B 42 642 15 HOH HOH . G 4 HOH B 43 643 75 HOH HOH . G 4 HOH B 44 644 13 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 E5J . . . D 2 27.334 12.079 2.445 1 64.65 ? C4 E5J 501 B 1 HETATM 2 C C14 E5J . . . D 2 22.236 4.639 2.855 1 44.46 ? C14 E5J 501 B 1 HETATM 3 C C5 E5J . . . D 2 25.534 11.546 0.719 1 65.2 ? C5 E5J 501 B 1 HETATM 4 C C6 E5J . . . D 2 26.926 9.667 1.748 1 49.58 ? C6 E5J 501 B 1 HETATM 5 C C11 E5J . . . D 2 28.666 8.003 2.071 1 40.77 ? C11 E5J 501 B 1 HETATM 6 C C7 E5J . . . D 2 23.624 15.332 1.901 1 82.64 ? C7 E5J 501 B 1 HETATM 7 C C8 E5J . . . D 2 25.837 16.305 1.809 1 75.19 ? C8 E5J 501 B 1 HETATM 8 C C9 E5J . . . D 2 28.26 9.33 2.027 1 44.1 ? C9 E5J 501 B 1 HETATM 9 C C10 E5J . . . D 2 26.013 8.632 1.49 1 40.87 ? C10 E5J 501 B 1 HETATM 10 C C12 E5J . . . D 2 26.413 7.313 1.514 1 37.63 ? C12 E5J 501 B 1 HETATM 11 C C13 E5J . . . D 2 27.737 6.987 1.814 1 38.57 ? C13 E5J 501 B 1 HETATM 12 N N1 E5J . . . D 2 26.557 11.022 1.688 1 59.51 ? N1 E5J 501 B 1 HETATM 13 N N2 E5J . . . D 2 25.053 15.122 2.173 1 78.89 ? N2 E5J 501 B 1 HETATM 14 C C3 E5J . . . D 2 24.731 12.701 1.277 1 67.64 ? C3 E5J 501 B 1 HETATM 15 N N3 E5J . . . D 2 28.23 5.659 1.868 1 40.08 ? N3 E5J 501 B 1 HETATM 16 CL CL1 E5J . . . D 2 25.487 0.756 3.26 1 44 ? CL1 E5J 501 B 1 HETATM 17 P P1 E5J . . . D 2 21.423 3.161 2.223 1 46.49 ? P1 E5J 501 B 1 HETATM 18 O O1 E5J . . . D 2 29.935 7.608 2.377 1 44.37 ? O1 E5J 501 B 1 HETATM 19 O O2 E5J . . . D 2 19.949 3.231 2.462 1 61.89 ? O2 E5J 501 B 1 HETATM 20 N N4 E5J . . . D 2 24.389 3.591 3.311 1 38.13 ? N4 E5J 501 B 1 HETATM 21 N N5 E5J . . . D 2 26.336 4.582 2.582 1 37.45 ? N5 E5J 501 B 1 HETATM 22 N N6 E5J . . . D 2 28.323 3.336 2.135 1 38.15 ? N6 E5J 501 B 1 HETATM 23 C C1 E5J . . . D 2 25.65 13.827 1.736 1 72.49 ? C1 E5J 501 B 1 HETATM 24 C C2 E5J . . . D 2 26.527 13.289 2.856 1 67.23 ? C2 E5J 501 B 1 HETATM 25 C C15 E5J . . . D 2 27.626 4.493 2.203 1 39.92 ? C15 E5J 501 B 1 HETATM 26 C C16 E5J . . . D 2 23.581 4.726 3.295 1 41.32 ? C16 E5J 501 B 1 HETATM 27 C C17 E5J . . . D 2 30.917 8.591 2.716 1 44.27 ? C17 E5J 501 B 1 HETATM 28 C C18 E5J . . . D 2 21.641 3.177 0.444 1 47.02 ? C18 E5J 501 B 1 HETATM 29 C C19 E5J . . . D 2 21.945 1.628 2.948 1 41.44 ? C19 E5J 501 B 1 HETATM 30 C C20 E5J . . . D 2 21.442 5.791 2.839 1 44.43 ? C20 E5J 501 B 1 HETATM 31 C C21 E5J . . . D 2 25.687 3.461 2.894 1 39.25 ? C21 E5J 501 B 1 HETATM 32 C C22 E5J . . . D 2 24.069 5.964 3.727 1 40.67 ? C22 E5J 501 B 1 HETATM 33 C C23 E5J . . . D 2 21.962 7.006 3.255 1 45.19 ? C23 E5J 501 B 1 HETATM 34 C C24 E5J . . . D 2 23.262 7.083 3.718 1 43.16 ? C24 E5J 501 B 1 HETATM 35 C C25 E5J . . . D 2 26.333 2.227 2.845 1 40.89 ? C25 E5J 501 B 1 HETATM 36 C C26 E5J . . . D 2 27.66 2.212 2.449 1 39.28 ? C26 E5J 501 B 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 36 #