data_6BRJ # _model_server_result.job_id 5lsGq5bGKgkDFt0qYXJ8QQ _model_server_result.datetime_utc '2024-11-22 21:17:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6brj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":901}' # _entry.id 6BRJ # _exptl.entry_id 6BRJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 464.586 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CYCLOPROPANECARBOXYLIC ACID {4-[4-(4-METHYL-PIPERAZIN-1-YL)-6-(5-METHYL-2H-PYRAZOL-3-YLAMINO)-PYRIMIDIN-2-YLSULFANYL]-PHENYL}-AMIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6BRJ _cell.length_a 61.5 _cell.length_b 75.4 _cell.length_c 77.237 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BRJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H28 N8 O S' _chem_comp.formula_weight 464.586 _chem_comp.id VX6 _chem_comp.mon_nstd_flag . _chem_comp.name 'CYCLOPROPANECARBOXYLIC ACID {4-[4-(4-METHYL-PIPERAZIN-1-YL)-6-(5-METHYL-2H-PYRAZOL-3-YLAMINO)-PYRIMIDIN-2-YLSULFANYL]-PHENYL}-AMIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 VX6 sing 376 n n N1 C6 VX6 sing 377 n n N1 C7 VX6 sing 378 n n C2 C3 VX6 sing 379 n n C2 H21 VX6 sing 380 n n C2 H22 VX6 sing 381 n n C3 N4 VX6 sing 382 n n C3 H31 VX6 sing 383 n n C3 H32 VX6 sing 384 n n N4 C5 VX6 sing 385 n n N4 C8 VX6 sing 386 n n C5 C6 VX6 sing 387 n n C5 H51 VX6 sing 388 n n C5 H52 VX6 sing 389 n n C6 H61 VX6 sing 390 n n C6 H62 VX6 sing 391 n n C7 H71 VX6 sing 392 n n C7 H72 VX6 sing 393 n n C7 H73 VX6 sing 394 n n C8 C9 VX6 sing 395 n y C8 N13 VX6 doub 396 n y C9 C10 VX6 doub 397 n y C9 H9 VX6 sing 398 n n C10 N11 VX6 sing 399 n y C10 N14 VX6 sing 400 n n N11 C12 VX6 doub 401 n y C12 N13 VX6 sing 402 n y C12 S23 VX6 sing 403 n n N14 C15 VX6 sing 404 n n N14 H14 VX6 sing 405 n n C15 C17 VX6 doub 406 n y C15 N20 VX6 sing 407 n y C17 C18 VX6 sing 408 n y C17 H17 VX6 sing 409 n n C18 N19 VX6 doub 410 n y C18 C21 VX6 sing 411 n n N19 N20 VX6 sing 412 n y N20 H20 VX6 sing 413 n n C21 H211 VX6 sing 414 n n C21 H212 VX6 sing 415 n n C21 H213 VX6 sing 416 n n S23 C24 VX6 sing 417 n n C24 C25 VX6 sing 418 n y C24 C29 VX6 doub 419 n y C25 C26 VX6 doub 420 n y C25 H25 VX6 sing 421 n n C26 C27 VX6 sing 422 n y C26 H26 VX6 sing 423 n n C27 C28 VX6 doub 424 n y C27 N30 VX6 sing 425 n n C28 C29 VX6 sing 426 n y C28 H28 VX6 sing 427 n n C29 H29 VX6 sing 428 n n N30 C31 VX6 sing 429 n n N30 H30 VX6 sing 430 n n C31 O32 VX6 doub 431 n n C31 C33 VX6 sing 432 n n C33 C34 VX6 sing 433 n n C33 C35 VX6 sing 434 n n C33 H33 VX6 sing 435 n n C34 C35 VX6 sing 436 n n C34 H341 VX6 sing 437 n n C34 H342 VX6 sing 438 n n C35 H351 VX6 sing 439 n n C35 H352 VX6 sing 440 n n # _atom_sites.entry_id 6BRJ _atom_sites.fract_transf_matrix[1][1] 0.01626 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013263 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012947 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 VX6 A 1 901 1 VX6 VX6 . C 3 HOH A 1 1001 89 HOH HOH . C 3 HOH A 2 1002 26 HOH HOH . C 3 HOH A 3 1003 28 HOH HOH . C 3 HOH A 4 1004 21 HOH HOH . C 3 HOH A 5 1005 100 HOH HOH . C 3 HOH A 6 1006 117 HOH HOH . C 3 HOH A 7 1007 6 HOH HOH . C 3 HOH A 8 1008 3 HOH HOH . C 3 HOH A 9 1009 78 HOH HOH . C 3 HOH A 10 1010 15 HOH HOH . C 3 HOH A 11 1011 43 HOH HOH . C 3 HOH A 12 1012 113 HOH HOH . C 3 HOH A 13 1013 18 HOH HOH . C 3 HOH A 14 1014 68 HOH HOH . C 3 HOH A 15 1015 14 HOH HOH . C 3 HOH A 16 1016 2 HOH HOH . C 3 HOH A 17 1017 80 HOH HOH . C 3 HOH A 18 1018 24 HOH HOH . C 3 HOH A 19 1019 4 HOH HOH . C 3 HOH A 20 1020 56 HOH HOH . C 3 HOH A 21 1021 16 HOH HOH . C 3 HOH A 22 1022 102 HOH HOH . C 3 HOH A 23 1023 37 HOH HOH . C 3 HOH A 24 1024 92 HOH HOH . C 3 HOH A 25 1025 13 HOH HOH . C 3 HOH A 26 1026 71 HOH HOH . C 3 HOH A 27 1027 39 HOH HOH . C 3 HOH A 28 1028 79 HOH HOH . C 3 HOH A 29 1029 45 HOH HOH . C 3 HOH A 30 1030 30 HOH HOH . C 3 HOH A 31 1031 32 HOH HOH . C 3 HOH A 32 1032 61 HOH HOH . C 3 HOH A 33 1033 87 HOH HOH . C 3 HOH A 34 1034 27 HOH HOH . C 3 HOH A 35 1035 105 HOH HOH . C 3 HOH A 36 1036 106 HOH HOH . C 3 HOH A 37 1037 48 HOH HOH . C 3 HOH A 38 1038 8 HOH HOH . C 3 HOH A 39 1039 25 HOH HOH . C 3 HOH A 40 1040 22 HOH HOH . C 3 HOH A 41 1041 33 HOH HOH . C 3 HOH A 42 1042 11 HOH HOH . C 3 HOH A 43 1043 82 HOH HOH . C 3 HOH A 44 1044 81 HOH HOH . C 3 HOH A 45 1045 5 HOH HOH . C 3 HOH A 46 1046 60 HOH HOH . C 3 HOH A 47 1047 46 HOH HOH . C 3 HOH A 48 1048 44 HOH HOH . C 3 HOH A 49 1049 36 HOH HOH . C 3 HOH A 50 1050 55 HOH HOH . C 3 HOH A 51 1051 101 HOH HOH . C 3 HOH A 52 1052 34 HOH HOH . C 3 HOH A 53 1053 69 HOH HOH . C 3 HOH A 54 1054 10 HOH HOH . C 3 HOH A 55 1055 118 HOH HOH . C 3 HOH A 56 1056 58 HOH HOH . C 3 HOH A 57 1057 111 HOH HOH . C 3 HOH A 58 1058 29 HOH HOH . C 3 HOH A 59 1059 19 HOH HOH . C 3 HOH A 60 1060 7 HOH HOH . C 3 HOH A 61 1061 75 HOH HOH . C 3 HOH A 62 1062 40 HOH HOH . C 3 HOH A 63 1063 115 HOH HOH . C 3 HOH A 64 1064 52 HOH HOH . C 3 HOH A 65 1065 70 HOH HOH . C 3 HOH A 66 1066 23 HOH HOH . C 3 HOH A 67 1067 9 HOH HOH . C 3 HOH A 68 1068 110 HOH HOH . C 3 HOH A 69 1069 38 HOH HOH . C 3 HOH A 70 1070 64 HOH HOH . C 3 HOH A 71 1071 66 HOH HOH . C 3 HOH A 72 1072 77 HOH HOH . C 3 HOH A 73 1073 88 HOH HOH . C 3 HOH A 74 1074 31 HOH HOH . C 3 HOH A 75 1075 20 HOH HOH . C 3 HOH A 76 1076 47 HOH HOH . C 3 HOH A 77 1077 59 HOH HOH . C 3 HOH A 78 1078 63 HOH HOH . C 3 HOH A 79 1079 95 HOH HOH . C 3 HOH A 80 1080 98 HOH HOH . C 3 HOH A 81 1081 35 HOH HOH . C 3 HOH A 82 1082 49 HOH HOH . C 3 HOH A 83 1083 1 HOH HOH . C 3 HOH A 84 1084 62 HOH HOH . C 3 HOH A 85 1085 96 HOH HOH . C 3 HOH A 86 1086 41 HOH HOH . C 3 HOH A 87 1087 12 HOH HOH . C 3 HOH A 88 1088 76 HOH HOH . C 3 HOH A 89 1089 67 HOH HOH . C 3 HOH A 90 1090 91 HOH HOH . C 3 HOH A 91 1091 42 HOH HOH . C 3 HOH A 92 1092 51 HOH HOH . C 3 HOH A 93 1093 86 HOH HOH . C 3 HOH A 94 1094 50 HOH HOH . C 3 HOH A 95 1095 72 HOH HOH . C 3 HOH A 96 1096 107 HOH HOH . C 3 HOH A 97 1097 114 HOH HOH . C 3 HOH A 98 1098 65 HOH HOH . C 3 HOH A 99 1099 104 HOH HOH . C 3 HOH A 100 1100 97 HOH HOH . C 3 HOH A 101 1101 103 HOH HOH . C 3 HOH A 102 1102 73 HOH HOH . C 3 HOH A 103 1103 85 HOH HOH . C 3 HOH A 104 1104 112 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 VX6 . . . B 2 -7.473 -4.605 -0.377 1 67.43 ? N1 VX6 901 A 1 HETATM 2 C C2 VX6 . . . B 2 -8.615 -5.167 -1.115 1 58.5 ? C2 VX6 901 A 1 HETATM 3 C C3 VX6 . . . B 2 -9.642 -4.086 -1.321 1 54.27 ? C3 VX6 901 A 1 HETATM 4 N N4 VX6 . . . B 2 -10.091 -3.661 0.004 1 45.96 ? N4 VX6 901 A 1 HETATM 5 C C5 VX6 . . . B 2 -8.974 -2.986 0.684 1 51.08 ? C5 VX6 901 A 1 HETATM 6 C C6 VX6 . . . B 2 -7.843 -3.955 0.886 1 61.04 ? C6 VX6 901 A 1 HETATM 7 C C7 VX6 . . . B 2 -6.568 -5.701 -0.027 1 68.06 ? C7 VX6 901 A 1 HETATM 8 C C8 VX6 . . . B 2 -11.278 -2.901 -0.019 1 33.82 ? C8 VX6 901 A 1 HETATM 9 C C9 VX6 . . . B 2 -12.292 -3.124 -0.919 1 30.24 ? C9 VX6 901 A 1 HETATM 10 C C10 VX6 . . . B 2 -13.435 -2.376 -0.859 1 28.7 ? C10 VX6 901 A 1 HETATM 11 N N11 VX6 . . . B 2 -13.564 -1.438 0.076 1 31.11 ? N11 VX6 901 A 1 HETATM 12 C C12 VX6 . . . B 2 -12.582 -1.243 0.953 1 34.68 ? C12 VX6 901 A 1 HETATM 13 N N13 VX6 . . . B 2 -11.487 -1.971 0.895 1 32.51 ? N13 VX6 901 A 1 HETATM 14 N N14 VX6 . . . B 2 -14.376 -2.625 -1.773 1 25 ? N14 VX6 901 A 1 HETATM 15 C C15 VX6 . . . B 2 -15.639 -2.203 -1.7 1 24.87 ? C15 VX6 901 A 1 HETATM 16 C C17 VX6 . . . B 2 -16.341 -1.4 -0.836 1 25.14 ? C17 VX6 901 A 1 HETATM 17 C C18 VX6 . . . B 2 -17.592 -1.412 -1.377 1 28.02 ? C18 VX6 901 A 1 HETATM 18 N N19 VX6 . . . B 2 -17.643 -2.152 -2.47 1 28.39 ? N19 VX6 901 A 1 HETATM 19 N N20 VX6 . . . B 2 -16.386 -2.661 -2.671 1 22.74 ? N20 VX6 901 A 1 HETATM 20 C C21 VX6 . . . B 2 -18.617 -0.617 -0.644 1 23.1 ? C21 VX6 901 A 1 HETATM 21 S S23 VX6 . . . B 2 -12.635 -0.099 2.177 1 39.84 ? S23 VX6 901 A 1 HETATM 22 C C24 VX6 . . . B 2 -13.991 0.777 1.777 1 36.77 ? C24 VX6 901 A 1 HETATM 23 C C25 VX6 . . . B 2 -15.146 0.773 2.515 1 35.05 ? C25 VX6 901 A 1 HETATM 24 C C26 VX6 . . . B 2 -16.226 1.532 2.116 1 30.72 ? C26 VX6 901 A 1 HETATM 25 C C27 VX6 . . . B 2 -16.128 2.293 0.98 1 33.2 ? C27 VX6 901 A 1 HETATM 26 C C28 VX6 . . . B 2 -14.972 2.282 0.266 1 33.4 ? C28 VX6 901 A 1 HETATM 27 C C29 VX6 . . . B 2 -13.906 1.536 0.656 1 34.82 ? C29 VX6 901 A 1 HETATM 28 N N30 VX6 . . . B 2 -17.106 3.069 0.503 1 39.73 ? N30 VX6 901 A 1 HETATM 29 C C31 VX6 . . . B 2 -18.064 3.6 1.222 1 47.71 ? C31 VX6 901 A 1 HETATM 30 O O32 VX6 . . . B 2 -18.127 3.439 2.395 1 51.28 ? O32 VX6 901 A 1 HETATM 31 C C33 VX6 . . . B 2 -19.114 4.406 0.524 1 49.07 ? C33 VX6 901 A 1 HETATM 32 C C34 VX6 . . . B 2 -19.316 5.755 1.191 1 44.3 ? C34 VX6 901 A 1 HETATM 33 C C35 VX6 . . . B 2 -18.468 5.641 -0.048 1 46.55 ? C35 VX6 901 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 18 _model_server_stats.element_count 33 #