data_6BSZ
#
_model_server_result.job_id            FXEFXY_-2uSuglU_CQj2cQ 
_model_server_result.datetime_utc      '2024-11-29 17:14:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6bsz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":602}' 
#
_entry.id    6BSZ 
#
_exptl.entry_id    6BSZ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          3 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6BSZ 
_cell.length_a            112.539 
_cell.length_b            166.623 
_cell.length_c            198.661 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6BSZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 28 A CYS 64 1_555 A SG CYS 70 A CYS 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf2 A SG CYS 333 A CYS 369 1_555 A SG CYS 348 A CYS 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf3 A SG CYS 388 A CYS 424 1_555 A SG CYS 395 A CYS 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf4 B SG CYS 28 B CYS 64 1_555 B SG CYS 70 B CYS 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf5 B SG CYS 333 B CYS 369 1_555 B SG CYS 348 B CYS 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf6 B SG CYS 388 B CYS 424 1_555 B SG CYS 395 B CYS 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
covale ? covale1 A ND2 ASN 59 A ASN 95 1_555 D C1 NAG . A NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? 
covale ? covale2 B ND2 ASN 59 B ASN 95 1_555 G C1 NAG . B NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 237 n n 
C1 O1 NAG sing 238 n n 
C1 O5 NAG sing 239 n n 
C1 H1 NAG sing 240 n n 
C2 C3 NAG sing 241 n n 
C2 N2 NAG sing 242 n n 
C2 H2 NAG sing 243 n n 
C3 C4 NAG sing 244 n n 
C3 O3 NAG sing 245 n n 
C3 H3 NAG sing 246 n n 
C4 C5 NAG sing 247 n n 
C4 O4 NAG sing 248 n n 
C4 H4 NAG sing 249 n n 
C5 C6 NAG sing 250 n n 
C5 O5 NAG sing 251 n n 
C5 H5 NAG sing 252 n n 
C6 O6 NAG sing 253 n n 
C6 H61 NAG sing 254 n n 
C6 H62 NAG sing 255 n n 
C7 C8 NAG sing 256 n n 
C7 N2 NAG sing 257 n n 
C7 O7 NAG doub 258 n n 
C8 H81 NAG sing 259 n n 
C8 H82 NAG sing 260 n n 
C8 H83 NAG sing 261 n n 
N2 HN2 NAG sing 262 n n 
O1 HO1 NAG sing 263 n n 
O3 HO3 NAG sing 264 n n 
O4 HO4 NAG sing 265 n n 
O6 HO6 NAG sing 266 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     6BSZ 
_atom_sites.fract_transf_matrix[1][1]    0.008886 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006002 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005034 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GLU A 1 601 1 GLU SX1 . 
D 3 NAG A 1 602 1 NAG NAG . 
E 4 SO4 A 1 603 4 SO4 SO4 . 
F 2 GLU B 1 601 2 GLU SX1 . 
G 3 NAG B 1 602 2 NAG NAG . 
H 4 SO4 B 1 603 3 SO4 SO4 . 
I 4 SO4 B 1 604 5 SO4 SO4 . 
J 4 SO4 B 1 605 6 SO4 SO4 . 
K 5 HOH A 1 701 61 HOH HOH . 
K 5 HOH A 2 702 19 HOH HOH . 
K 5 HOH A 3 703 52 HOH HOH . 
K 5 HOH A 4 704 25 HOH HOH . 
K 5 HOH A 5 705 64 HOH HOH . 
K 5 HOH A 6 706 77 HOH HOH . 
K 5 HOH A 7 707 16 HOH HOH . 
K 5 HOH A 8 708 3 HOH HOH . 
K 5 HOH A 9 709 5 HOH HOH . 
K 5 HOH A 10 710 109 HOH HOH . 
K 5 HOH A 11 711 23 HOH HOH . 
K 5 HOH A 12 712 98 HOH HOH . 
K 5 HOH A 13 713 17 HOH HOH . 
K 5 HOH A 14 714 89 HOH HOH . 
K 5 HOH A 15 715 51 HOH HOH . 
K 5 HOH A 16 716 21 HOH HOH . 
K 5 HOH A 17 717 81 HOH HOH . 
K 5 HOH A 18 718 10 HOH HOH . 
K 5 HOH A 19 719 101 HOH HOH . 
K 5 HOH A 20 720 1 HOH HOH . 
K 5 HOH A 21 721 110 HOH HOH . 
K 5 HOH A 22 722 24 HOH HOH . 
K 5 HOH A 23 723 8 HOH HOH . 
K 5 HOH A 24 724 104 HOH HOH . 
K 5 HOH A 25 725 13 HOH HOH . 
K 5 HOH A 26 726 67 HOH HOH . 
K 5 HOH A 27 727 76 HOH HOH . 
K 5 HOH A 28 728 83 HOH HOH . 
K 5 HOH A 29 729 53 HOH HOH . 
K 5 HOH A 30 730 59 HOH HOH . 
K 5 HOH A 31 731 63 HOH HOH . 
K 5 HOH A 32 732 60 HOH HOH . 
K 5 HOH A 33 733 57 HOH HOH . 
K 5 HOH A 34 734 18 HOH HOH . 
K 5 HOH A 35 735 108 HOH HOH . 
K 5 HOH A 36 736 118 HOH HOH . 
K 5 HOH A 37 737 74 HOH HOH . 
K 5 HOH A 38 738 58 HOH HOH . 
K 5 HOH A 39 739 15 HOH HOH . 
K 5 HOH A 40 740 100 HOH HOH . 
K 5 HOH A 41 741 107 HOH HOH . 
K 5 HOH A 42 742 14 HOH HOH . 
K 5 HOH A 43 743 102 HOH HOH . 
K 5 HOH A 44 744 87 HOH HOH . 
K 5 HOH A 45 745 119 HOH HOH . 
K 5 HOH A 46 746 2 HOH HOH . 
K 5 HOH A 47 747 70 HOH HOH . 
K 5 HOH A 48 748 7 HOH HOH . 
K 5 HOH A 49 749 115 HOH HOH . 
K 5 HOH A 50 750 50 HOH HOH . 
K 5 HOH A 51 751 106 HOH HOH . 
K 5 HOH A 52 752 73 HOH HOH . 
K 5 HOH A 53 753 80 HOH HOH . 
K 5 HOH A 54 754 79 HOH HOH . 
K 5 HOH A 55 755 111 HOH HOH . 
K 5 HOH A 56 756 97 HOH HOH . 
K 5 HOH A 57 757 78 HOH HOH . 
K 5 HOH A 58 758 22 HOH HOH . 
K 5 HOH A 59 759 99 HOH HOH . 
K 5 HOH A 60 760 62 HOH HOH . 
K 5 HOH A 61 761 72 HOH HOH . 
K 5 HOH A 62 762 20 HOH HOH . 
K 5 HOH A 63 763 105 HOH HOH . 
K 5 HOH A 64 764 82 HOH HOH . 
K 5 HOH A 65 765 96 HOH HOH . 
K 5 HOH A 66 766 103 HOH HOH . 
L 5 HOH B 1 701 121 HOH HOH . 
L 5 HOH B 2 702 114 HOH HOH . 
L 5 HOH B 3 703 26 HOH HOH . 
L 5 HOH B 4 704 12 HOH HOH . 
L 5 HOH B 5 705 75 HOH HOH . 
L 5 HOH B 6 706 94 HOH HOH . 
L 5 HOH B 7 707 27 HOH HOH . 
L 5 HOH B 8 708 28 HOH HOH . 
L 5 HOH B 9 709 38 HOH HOH . 
L 5 HOH B 10 710 47 HOH HOH . 
L 5 HOH B 11 711 49 HOH HOH . 
L 5 HOH B 12 712 85 HOH HOH . 
L 5 HOH B 13 713 92 HOH HOH . 
L 5 HOH B 14 714 4 HOH HOH . 
L 5 HOH B 15 715 36 HOH HOH . 
L 5 HOH B 16 716 55 HOH HOH . 
L 5 HOH B 17 717 9 HOH HOH . 
L 5 HOH B 18 718 42 HOH HOH . 
L 5 HOH B 19 719 11 HOH HOH . 
L 5 HOH B 20 720 48 HOH HOH . 
L 5 HOH B 21 721 44 HOH HOH . 
L 5 HOH B 22 722 33 HOH HOH . 
L 5 HOH B 23 723 37 HOH HOH . 
L 5 HOH B 24 724 30 HOH HOH . 
L 5 HOH B 25 725 41 HOH HOH . 
L 5 HOH B 26 726 29 HOH HOH . 
L 5 HOH B 27 727 43 HOH HOH . 
L 5 HOH B 28 728 69 HOH HOH . 
L 5 HOH B 29 729 120 HOH HOH . 
L 5 HOH B 30 730 88 HOH HOH . 
L 5 HOH B 31 731 65 HOH HOH . 
L 5 HOH B 32 732 39 HOH HOH . 
L 5 HOH B 33 733 46 HOH HOH . 
L 5 HOH B 34 734 90 HOH HOH . 
L 5 HOH B 35 735 93 HOH HOH . 
L 5 HOH B 36 736 68 HOH HOH . 
L 5 HOH B 37 737 56 HOH HOH . 
L 5 HOH B 38 738 71 HOH HOH . 
L 5 HOH B 39 739 54 HOH HOH . 
L 5 HOH B 40 740 95 HOH HOH . 
L 5 HOH B 41 741 45 HOH HOH . 
L 5 HOH B 42 742 117 HOH HOH . 
L 5 HOH B 43 743 32 HOH HOH . 
L 5 HOH B 44 744 35 HOH HOH . 
L 5 HOH B 45 745 31 HOH HOH . 
L 5 HOH B 46 746 91 HOH HOH . 
L 5 HOH B 47 747 112 HOH HOH . 
L 5 HOH B 48 748 66 HOH HOH . 
L 5 HOH B 49 749 34 HOH HOH . 
L 5 HOH B 50 750 86 HOH HOH . 
L 5 HOH B 51 751 6 HOH HOH . 
L 5 HOH B 52 752 40 HOH HOH . 
L 5 HOH B 53 753 116 HOH HOH . 
L 5 HOH B 54 754 113 HOH HOH . 
L 5 HOH B 55 755 84 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . D 3 -28.828 -27.874 70.208 1 33.86 ? C1 NAG 602 A 1 
HETATM 2 C C2 NAG . . . D 3 -28.435 -27.191 71.522 1 33.75 ? C2 NAG 602 A 1 
HETATM 3 C C3 NAG . . . D 3 -28.076 -28.218 72.596 1 33.91 ? C3 NAG 602 A 1 
HETATM 4 C C4 NAG . . . D 3 -29.162 -29.286 72.727 1 34.06 ? C4 NAG 602 A 1 
HETATM 5 C C5 NAG . . . D 3 -29.479 -29.88 71.35 1 34.08 ? C5 NAG 602 A 1 
HETATM 6 C C6 NAG . . . D 3 -30.597 -30.921 71.407 1 34.13 ? C6 NAG 602 A 1 
HETATM 7 C C7 NAG . . . D 3 -27.345 -25.009 71.79 1 33.08 ? C7 NAG 602 A 1 
HETATM 8 C C8 NAG . . . D 3 -26.121 -24.187 71.515 1 33.03 ? C8 NAG 602 A 1 
HETATM 9 N N2 NAG . . . D 3 -27.328 -26.265 71.336 1 33.45 ? N2 NAG 602 A 1 
HETATM 10 O O3 NAG . . . D 3 -27.894 -27.561 73.831 1 34.16 ? O3 NAG 602 A 1 
HETATM 11 O O4 NAG . . . D 3 -28.742 -30.29 73.629 1 34.03 ? O4 NAG 602 A 1 
HETATM 12 O O5 NAG . . . D 3 -29.836 -28.847 70.443 1 33.98 ? O5 NAG 602 A 1 
HETATM 13 O O6 NAG . . . D 3 -31.848 -30.305 71.625 1 34.45 ? O6 NAG 602 A 1 
HETATM 14 O O7 NAG . . . D 3 -28.289 -24.509 72.402 1 33 ? O7 NAG 602 A 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    30 
_model_server_stats.query_time_ms           293 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           14 
#