data_6BSZ # _model_server_result.job_id lsxO2lmSfoN_oRq4E7-Rog _model_server_result.datetime_utc '2024-11-26 05:55:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6bsz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":602}' # _entry.id 6BSZ # _exptl.entry_id 6BSZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 221.208 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6BSZ _cell.length_a 112.539 _cell.length_b 166.623 _cell.length_c 198.661 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BSZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 28 A CYS 64 1_555 A SG CYS 70 A CYS 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 A SG CYS 333 A CYS 369 1_555 A SG CYS 348 A CYS 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 A SG CYS 388 A CYS 424 1_555 A SG CYS 395 A CYS 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf4 B SG CYS 28 B CYS 64 1_555 B SG CYS 70 B CYS 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf5 B SG CYS 333 B CYS 369 1_555 B SG CYS 348 B CYS 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf6 B SG CYS 388 B CYS 424 1_555 B SG CYS 395 B CYS 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? covale ? covale1 A ND2 ASN 59 A ASN 95 1_555 D C1 NAG . A NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale2 B ND2 ASN 59 B ASN 95 1_555 G C1 NAG . B NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 NAG sing 237 n n C1 O1 NAG sing 238 n n C1 O5 NAG sing 239 n n C1 H1 NAG sing 240 n n C2 C3 NAG sing 241 n n C2 N2 NAG sing 242 n n C2 H2 NAG sing 243 n n C3 C4 NAG sing 244 n n C3 O3 NAG sing 245 n n C3 H3 NAG sing 246 n n C4 C5 NAG sing 247 n n C4 O4 NAG sing 248 n n C4 H4 NAG sing 249 n n C5 C6 NAG sing 250 n n C5 O5 NAG sing 251 n n C5 H5 NAG sing 252 n n C6 O6 NAG sing 253 n n C6 H61 NAG sing 254 n n C6 H62 NAG sing 255 n n C7 C8 NAG sing 256 n n C7 N2 NAG sing 257 n n C7 O7 NAG doub 258 n n C8 H81 NAG sing 259 n n C8 H82 NAG sing 260 n n C8 H83 NAG sing 261 n n N2 HN2 NAG sing 262 n n O1 HO1 NAG sing 263 n n O3 HO3 NAG sing 264 n n O4 HO4 NAG sing 265 n n O6 HO6 NAG sing 266 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 6BSZ _atom_sites.fract_transf_matrix[1][1] 0.008886 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006002 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005034 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GLU A 1 601 1 GLU SX1 . D 3 NAG A 1 602 1 NAG NAG . E 4 SO4 A 1 603 4 SO4 SO4 . F 2 GLU B 1 601 2 GLU SX1 . G 3 NAG B 1 602 2 NAG NAG . H 4 SO4 B 1 603 3 SO4 SO4 . I 4 SO4 B 1 604 5 SO4 SO4 . J 4 SO4 B 1 605 6 SO4 SO4 . K 5 HOH A 1 701 61 HOH HOH . K 5 HOH A 2 702 19 HOH HOH . K 5 HOH A 3 703 52 HOH HOH . K 5 HOH A 4 704 25 HOH HOH . K 5 HOH A 5 705 64 HOH HOH . K 5 HOH A 6 706 77 HOH HOH . K 5 HOH A 7 707 16 HOH HOH . K 5 HOH A 8 708 3 HOH HOH . K 5 HOH A 9 709 5 HOH HOH . K 5 HOH A 10 710 109 HOH HOH . K 5 HOH A 11 711 23 HOH HOH . K 5 HOH A 12 712 98 HOH HOH . K 5 HOH A 13 713 17 HOH HOH . K 5 HOH A 14 714 89 HOH HOH . K 5 HOH A 15 715 51 HOH HOH . K 5 HOH A 16 716 21 HOH HOH . K 5 HOH A 17 717 81 HOH HOH . K 5 HOH A 18 718 10 HOH HOH . K 5 HOH A 19 719 101 HOH HOH . K 5 HOH A 20 720 1 HOH HOH . K 5 HOH A 21 721 110 HOH HOH . K 5 HOH A 22 722 24 HOH HOH . K 5 HOH A 23 723 8 HOH HOH . K 5 HOH A 24 724 104 HOH HOH . K 5 HOH A 25 725 13 HOH HOH . K 5 HOH A 26 726 67 HOH HOH . K 5 HOH A 27 727 76 HOH HOH . K 5 HOH A 28 728 83 HOH HOH . K 5 HOH A 29 729 53 HOH HOH . K 5 HOH A 30 730 59 HOH HOH . K 5 HOH A 31 731 63 HOH HOH . K 5 HOH A 32 732 60 HOH HOH . K 5 HOH A 33 733 57 HOH HOH . K 5 HOH A 34 734 18 HOH HOH . K 5 HOH A 35 735 108 HOH HOH . K 5 HOH A 36 736 118 HOH HOH . K 5 HOH A 37 737 74 HOH HOH . K 5 HOH A 38 738 58 HOH HOH . K 5 HOH A 39 739 15 HOH HOH . K 5 HOH A 40 740 100 HOH HOH . K 5 HOH A 41 741 107 HOH HOH . K 5 HOH A 42 742 14 HOH HOH . K 5 HOH A 43 743 102 HOH HOH . K 5 HOH A 44 744 87 HOH HOH . K 5 HOH A 45 745 119 HOH HOH . K 5 HOH A 46 746 2 HOH HOH . K 5 HOH A 47 747 70 HOH HOH . K 5 HOH A 48 748 7 HOH HOH . K 5 HOH A 49 749 115 HOH HOH . K 5 HOH A 50 750 50 HOH HOH . K 5 HOH A 51 751 106 HOH HOH . K 5 HOH A 52 752 73 HOH HOH . K 5 HOH A 53 753 80 HOH HOH . K 5 HOH A 54 754 79 HOH HOH . K 5 HOH A 55 755 111 HOH HOH . K 5 HOH A 56 756 97 HOH HOH . K 5 HOH A 57 757 78 HOH HOH . K 5 HOH A 58 758 22 HOH HOH . K 5 HOH A 59 759 99 HOH HOH . K 5 HOH A 60 760 62 HOH HOH . K 5 HOH A 61 761 72 HOH HOH . K 5 HOH A 62 762 20 HOH HOH . K 5 HOH A 63 763 105 HOH HOH . K 5 HOH A 64 764 82 HOH HOH . K 5 HOH A 65 765 96 HOH HOH . K 5 HOH A 66 766 103 HOH HOH . L 5 HOH B 1 701 121 HOH HOH . L 5 HOH B 2 702 114 HOH HOH . L 5 HOH B 3 703 26 HOH HOH . L 5 HOH B 4 704 12 HOH HOH . L 5 HOH B 5 705 75 HOH HOH . L 5 HOH B 6 706 94 HOH HOH . L 5 HOH B 7 707 27 HOH HOH . L 5 HOH B 8 708 28 HOH HOH . L 5 HOH B 9 709 38 HOH HOH . L 5 HOH B 10 710 47 HOH HOH . L 5 HOH B 11 711 49 HOH HOH . L 5 HOH B 12 712 85 HOH HOH . L 5 HOH B 13 713 92 HOH HOH . L 5 HOH B 14 714 4 HOH HOH . L 5 HOH B 15 715 36 HOH HOH . L 5 HOH B 16 716 55 HOH HOH . L 5 HOH B 17 717 9 HOH HOH . L 5 HOH B 18 718 42 HOH HOH . L 5 HOH B 19 719 11 HOH HOH . L 5 HOH B 20 720 48 HOH HOH . L 5 HOH B 21 721 44 HOH HOH . L 5 HOH B 22 722 33 HOH HOH . L 5 HOH B 23 723 37 HOH HOH . L 5 HOH B 24 724 30 HOH HOH . L 5 HOH B 25 725 41 HOH HOH . L 5 HOH B 26 726 29 HOH HOH . L 5 HOH B 27 727 43 HOH HOH . L 5 HOH B 28 728 69 HOH HOH . L 5 HOH B 29 729 120 HOH HOH . L 5 HOH B 30 730 88 HOH HOH . L 5 HOH B 31 731 65 HOH HOH . L 5 HOH B 32 732 39 HOH HOH . L 5 HOH B 33 733 46 HOH HOH . L 5 HOH B 34 734 90 HOH HOH . L 5 HOH B 35 735 93 HOH HOH . L 5 HOH B 36 736 68 HOH HOH . L 5 HOH B 37 737 56 HOH HOH . L 5 HOH B 38 738 71 HOH HOH . L 5 HOH B 39 739 54 HOH HOH . L 5 HOH B 40 740 95 HOH HOH . L 5 HOH B 41 741 45 HOH HOH . L 5 HOH B 42 742 117 HOH HOH . L 5 HOH B 43 743 32 HOH HOH . L 5 HOH B 44 744 35 HOH HOH . L 5 HOH B 45 745 31 HOH HOH . L 5 HOH B 46 746 91 HOH HOH . L 5 HOH B 47 747 112 HOH HOH . L 5 HOH B 48 748 66 HOH HOH . L 5 HOH B 49 749 34 HOH HOH . L 5 HOH B 50 750 86 HOH HOH . L 5 HOH B 51 751 6 HOH HOH . L 5 HOH B 52 752 40 HOH HOH . L 5 HOH B 53 753 116 HOH HOH . L 5 HOH B 54 754 113 HOH HOH . L 5 HOH B 55 755 84 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . G 3 -76.228 -65.013 42.082 1 34.54 ? C1 NAG 602 B 1 HETATM 2 C C2 NAG . . . G 3 -76.683 -66.444 41.783 1 34.47 ? C2 NAG 602 B 1 HETATM 3 C C3 NAG . . . G 3 -77.075 -67.172 43.07 1 34.67 ? C3 NAG 602 B 1 HETATM 4 C C4 NAG . . . G 3 -75.974 -67.064 44.124 1 34.79 ? C4 NAG 602 B 1 HETATM 5 C C5 NAG . . . G 3 -75.565 -65.598 44.31 1 34.71 ? C5 NAG 602 B 1 HETATM 6 C C6 NAG . . . G 3 -74.408 -65.436 45.297 1 34.91 ? C6 NAG 602 B 1 HETATM 7 C C7 NAG . . . G 3 -77.804 -67.195 39.731 1 34.28 ? C7 NAG 602 B 1 HETATM 8 C C8 NAG . . . G 3 -79.037 -67.089 38.885 1 34.16 ? C8 NAG 602 B 1 HETATM 9 N N2 NAG . . . G 3 -77.795 -66.461 40.847 1 34.39 ? N2 NAG 602 B 1 HETATM 10 O O3 NAG . . . G 3 -77.332 -68.528 42.786 1 34.79 ? O3 NAG 602 B 1 HETATM 11 O O4 NAG . . . G 3 -76.422 -67.625 45.341 1 34.59 ? O4 NAG 602 B 1 HETATM 12 O O5 NAG . . . G 3 -75.201 -65.034 43.06 1 34.68 ? O5 NAG 602 B 1 HETATM 13 O O6 NAG . . . G 3 -73.181 -65.811 44.706 1 34.95 ? O6 NAG 602 B 1 HETATM 14 O O7 NAG . . . G 3 -76.88 -67.927 39.372 1 34.14 ? O7 NAG 602 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #