data_6BT0 # _model_server_result.job_id OgSCZLoNPv5GZRMN8xAwLA _model_server_result.datetime_utc '2024-11-29 04:00:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6bt0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":201}' # _entry.id 6BT0 # _exptl.entry_id 6BT0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 68.35 _cell.angle_beta 90.01 _cell.angle_gamma 72.05 _cell.entry_id 6BT0 _cell.length_a 49.15 _cell.length_b 60.14 _cell.length_c 66.32 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BT0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,N 1 1 B,G,H,I,O 2 1 C,J,K,P 3 1 D,L,M,Q 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 J N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 21 A SER 20 1_555 E MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc2 E MG MG . A MG 201 1_555 F O1B GDP . A GDP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.956 ? metalc ? metalc3 E MG MG . A MG 201 1_555 N O HOH . A HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? metalc ? metalc4 E MG MG . A MG 201 1_555 N O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc5 E MG MG . A MG 201 1_555 N O HOH . A HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? metalc ? metalc6 E MG MG . A MG 201 1_555 N O HOH . A HOH 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc7 B OG SER 21 B SER 20 1_555 G MG MG . B MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc8 G MG MG . B MG 201 1_555 H O3B GDP . B GDP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.653 ? metalc ? metalc9 G MG MG . B MG 201 1_555 O O HOH . B HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? metalc ? metalc10 G MG MG . B MG 201 1_555 O O HOH . B HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc11 G MG MG . B MG 201 1_555 O O HOH . B HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.618 ? metalc ? metalc12 G MG MG . B MG 201 1_555 O O HOH . B HOH 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc13 C OG SER 21 C SER 20 1_555 J MG MG . C MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc14 J MG MG . C MG 201 1_555 K O1B GDP . C GDP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc15 J MG MG . C MG 201 1_555 P O HOH . C HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc16 J MG MG . C MG 201 1_555 P O HOH . C HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.912 ? metalc ? metalc17 J MG MG . C MG 201 1_555 P O HOH . C HOH 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.763 ? metalc ? metalc18 D OG SER 21 D SER 20 1_555 L MG MG . D MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc19 L MG MG . D MG 201 1_555 M O3B GDP . D GDP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc20 L MG MG . D MG 201 1_555 M O2B GDP . D GDP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.969 ? metalc ? metalc21 L MG MG . D MG 201 1_555 Q O HOH . D HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.932 ? metalc ? metalc22 L MG MG . D MG 201 1_555 Q O HOH . D HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.922 ? metalc ? metalc23 L MG MG . D MG 201 1_555 Q O HOH . D HOH 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6BT0 _atom_sites.fract_transf_matrix[1][1] 0.020346 _atom_sites.fract_transf_matrix[1][2] -0.006591 _atom_sites.fract_transf_matrix[1][3] 0.002776 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017479 _atom_sites.fract_transf_matrix[2][3] -0.007354 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016359 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 MG A 1 201 202 MG MG . F 3 GDP A 1 202 201 GDP GDP . G 2 MG B 1 201 202 MG MG . H 3 GDP B 1 202 201 GDP GDP . I 4 E7V B 1 203 1 E7V NV1 . J 2 MG C 1 201 202 MG MG . K 3 GDP C 1 202 201 GDP GDP . L 2 MG D 1 201 202 MG MG . M 3 GDP D 1 202 201 GDP GDP . N 5 HOH A 1 301 3 HOH HOH . N 5 HOH A 2 302 2 HOH HOH . N 5 HOH A 3 303 1 HOH HOH . N 5 HOH A 4 304 4 HOH HOH . O 5 HOH B 1 301 7 HOH HOH . O 5 HOH B 2 302 13 HOH HOH . O 5 HOH B 3 303 11 HOH HOH . O 5 HOH B 4 304 5 HOH HOH . O 5 HOH B 5 305 14 HOH HOH . O 5 HOH B 6 306 12 HOH HOH . P 5 HOH C 1 301 8 HOH HOH . P 5 HOH C 2 302 6 HOH HOH . P 5 HOH C 3 303 9 HOH HOH . P 5 HOH C 4 304 10 HOH HOH . Q 5 HOH D 1 301 18 HOH HOH . Q 5 HOH D 2 302 15 HOH HOH . Q 5 HOH D 3 303 17 HOH HOH . Q 5 HOH D 4 304 16 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 2 _atom_site.Cartn_x 19.111 _atom_site.Cartn_y -1.9 _atom_site.Cartn_z -12.547 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 25.23 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 201 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #