data_6BT5 # _model_server_result.job_id xMofIbc9sTCeduo-zOKYVw _model_server_result.datetime_utc '2025-03-09 01:47:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6bt5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 6BT5 # _exptl.entry_id 6BT5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 183.1 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-2-amino-4-phosphonobutanoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6BT5 _cell.length_a 113.65 _cell.length_b 166.008 _cell.length_c 196.038 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BT5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 28 A CYS 64 1_555 A SG CYS 70 A CYS 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 A SG CYS 333 A CYS 369 1_555 A SG CYS 348 A CYS 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 A SG CYS 388 A CYS 424 1_555 A SG CYS 395 A CYS 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 B SG CYS 28 B CYS 64 1_555 B SG CYS 70 B CYS 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 B SG CYS 333 B CYS 369 1_555 B SG CYS 348 B CYS 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf6 B SG CYS 388 B CYS 424 1_555 B SG CYS 395 B CYS 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? covale ? covale1 A ND2 ASN 59 A ASN 95 1_555 D C1 NAG . A NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale2 B ND2 ASN 59 B ASN 95 1_555 F C1 NAG . B NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? # _chem_comp.formula 'C4 H10 N O5 P' _chem_comp.formula_weight 183.1 _chem_comp.id E7P _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-2-amino-4-phosphonobutanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 P E7P doub 83 n n O C E7P doub 84 n n CA C E7P sing 85 n n CA N E7P sing 86 n n CA C2 E7P sing 87 n n C OXT E7P sing 88 n n P O3 E7P sing 89 n n P C1 E7P sing 90 n n P O1 E7P sing 91 n n C1 C2 E7P sing 92 n n O1 H1 E7P sing 93 n n C1 H4 E7P sing 94 n n C1 H3 E7P sing 95 n n CA HA E7P sing 96 n n C2 H5 E7P sing 97 n n C2 H6 E7P sing 98 n n OXT HXT E7P sing 99 n n N H E7P sing 100 n n N H2 E7P sing 101 n n O3 H11 E7P sing 102 n n # _atom_sites.entry_id 6BT5 _atom_sites.fract_transf_matrix[1][1] 0.008799 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006024 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005101 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 E7P A 1 601 1 E7P SX1 . D 3 NAG A 1 602 1 NAG NAG . E 2 E7P B 1 601 2 E7P SX1 . F 3 NAG B 1 602 2 NAG NAG . G 4 HOH A 1 701 50 HOH HOH . G 4 HOH A 2 702 18 HOH HOH . G 4 HOH A 3 703 10 HOH HOH . G 4 HOH A 4 704 43 HOH HOH . G 4 HOH A 5 705 42 HOH HOH . G 4 HOH A 6 706 11 HOH HOH . G 4 HOH A 7 707 5 HOH HOH . G 4 HOH A 8 708 60 HOH HOH . G 4 HOH A 9 709 53 HOH HOH . G 4 HOH A 10 710 30 HOH HOH . G 4 HOH A 11 711 71 HOH HOH . G 4 HOH A 12 712 23 HOH HOH . G 4 HOH A 13 713 8 HOH HOH . G 4 HOH A 14 714 34 HOH HOH . G 4 HOH A 15 715 14 HOH HOH . G 4 HOH A 16 716 15 HOH HOH . G 4 HOH A 17 717 22 HOH HOH . G 4 HOH A 18 718 58 HOH HOH . G 4 HOH A 19 719 68 HOH HOH . G 4 HOH A 20 720 65 HOH HOH . G 4 HOH A 21 721 21 HOH HOH . G 4 HOH A 22 722 25 HOH HOH . G 4 HOH A 23 723 56 HOH HOH . G 4 HOH A 24 724 41 HOH HOH . G 4 HOH A 25 725 40 HOH HOH . G 4 HOH A 26 726 36 HOH HOH . G 4 HOH A 27 727 69 HOH HOH . G 4 HOH A 28 728 7 HOH HOH . G 4 HOH A 29 729 4 HOH HOH . G 4 HOH A 30 730 45 HOH HOH . G 4 HOH A 31 731 19 HOH HOH . G 4 HOH A 32 732 44 HOH HOH . G 4 HOH A 33 733 20 HOH HOH . G 4 HOH A 34 734 13 HOH HOH . G 4 HOH A 35 735 35 HOH HOH . G 4 HOH A 36 736 6 HOH HOH . G 4 HOH A 37 737 2 HOH HOH . G 4 HOH A 38 738 17 HOH HOH . G 4 HOH A 39 739 70 HOH HOH . G 4 HOH A 40 740 57 HOH HOH . G 4 HOH A 41 741 67 HOH HOH . G 4 HOH A 42 742 33 HOH HOH . G 4 HOH A 43 743 59 HOH HOH . G 4 HOH A 44 744 32 HOH HOH . H 4 HOH B 1 701 66 HOH HOH . H 4 HOH B 2 702 37 HOH HOH . H 4 HOH B 3 703 55 HOH HOH . H 4 HOH B 4 704 64 HOH HOH . H 4 HOH B 5 705 49 HOH HOH . H 4 HOH B 6 706 38 HOH HOH . H 4 HOH B 7 707 24 HOH HOH . H 4 HOH B 8 708 72 HOH HOH . H 4 HOH B 9 709 63 HOH HOH . H 4 HOH B 10 710 62 HOH HOH . H 4 HOH B 11 711 48 HOH HOH . H 4 HOH B 12 712 54 HOH HOH . H 4 HOH B 13 713 73 HOH HOH . H 4 HOH B 14 714 28 HOH HOH . H 4 HOH B 15 715 51 HOH HOH . H 4 HOH B 16 716 52 HOH HOH . H 4 HOH B 17 717 47 HOH HOH . H 4 HOH B 18 718 16 HOH HOH . H 4 HOH B 19 719 9 HOH HOH . H 4 HOH B 20 720 12 HOH HOH . H 4 HOH B 21 721 1 HOH HOH . H 4 HOH B 22 722 31 HOH HOH . H 4 HOH B 23 723 39 HOH HOH . H 4 HOH B 24 724 3 HOH HOH . H 4 HOH B 25 725 26 HOH HOH . H 4 HOH B 26 726 61 HOH HOH . H 4 HOH B 27 727 46 HOH HOH . H 4 HOH B 28 728 29 HOH HOH . H 4 HOH B 29 729 27 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 E7P . . . E 2 14.026 -52.99 27.308 1 27.77 ? O1 E7P 601 B 1 HETATM 2 O O2 E7P . . . E 2 15.777 -53.442 25.548 1 27.72 ? O2 E7P 601 B 1 HETATM 3 C C1 E7P . . . E 2 13.169 -53.453 24.815 1 27.79 ? C1 E7P 601 B 1 HETATM 4 C C E7P . . . E 2 9.306 -53.809 25.19 1 27.72 ? C E7P 601 B 1 HETATM 5 C CA E7P . . . E 2 10.669 -53.757 24.433 1 27.72 ? CA E7P 601 B 1 HETATM 6 C C2 E7P . . . E 2 11.778 -53.238 25.36 1 27.75 ? C2 E7P 601 B 1 HETATM 7 O O E7P . . . E 2 8.414 -52.932 24.822 1 27.69 ? O E7P 601 B 1 HETATM 8 O OXT E7P . . . E 2 9.129 -54.64 26.057 1 27.76 ? OXT E7P 601 B 1 HETATM 9 N N E7P . . . E 2 10.435 -52.929 23.237 1 27.7 ? N E7P 601 B 1 HETATM 10 P P E7P . . . E 2 14.414 -53.795 26.047 1 27.78 ? P E7P 601 B 1 HETATM 11 O O3 E7P . . . E 2 14.287 -55.295 26.395 1 27.83 ? O3 E7P 601 B 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 11 #