data_6BTL # _model_server_result.job_id NrTOTHWIk2sahFTQbJdeiA _model_server_result.datetime_utc '2024-11-05 10:54:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6btl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 6BTL # _exptl.entry_id 6BTL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6BTL _cell.length_a 117.664 _cell.length_b 117.664 _cell.length_c 225.163 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BTL _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_645 y+1,x-1,-z 0 1 0 1 0 0 0 0 -1 117.664 -117.664 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 55 A CYS 52 1_555 A SG CYS 60 A CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf2 B SG CYS 55 B CYS 52 1_555 B SG CYS 60 B CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 116 n n PA O2A FAD sing 117 n n PA O5B FAD sing 118 n n PA O3P FAD sing 119 n n O2A HOA2 FAD sing 120 n n O5B C5B FAD sing 121 n n C5B C4B FAD sing 122 n n C5B H51A FAD sing 123 n n C5B H52A FAD sing 124 n n C4B O4B FAD sing 125 n n C4B C3B FAD sing 126 n n C4B H4B FAD sing 127 n n O4B C1B FAD sing 128 n n C3B O3B FAD sing 129 n n C3B C2B FAD sing 130 n n C3B H3B FAD sing 131 n n O3B HO3A FAD sing 132 n n C2B O2B FAD sing 133 n n C2B C1B FAD sing 134 n n C2B H2B FAD sing 135 n n O2B HO2A FAD sing 136 n n C1B N9A FAD sing 137 n n C1B H1B FAD sing 138 n n N9A C8A FAD sing 139 n y N9A C4A FAD sing 140 n y C8A N7A FAD doub 141 n y C8A H8A FAD sing 142 n n N7A C5A FAD sing 143 n y C5A C6A FAD sing 144 n y C5A C4A FAD doub 145 n y C6A N6A FAD sing 146 n n C6A N1A FAD doub 147 n y N6A H61A FAD sing 148 n n N6A H62A FAD sing 149 n n N1A C2A FAD sing 150 n y C2A N3A FAD doub 151 n y C2A H2A FAD sing 152 n n N3A C4A FAD sing 153 n y N1 C2 FAD sing 154 n n N1 C10 FAD doub 155 n n C2 O2 FAD doub 156 n n C2 N3 FAD sing 157 n n N3 C4 FAD sing 158 n n N3 HN3 FAD sing 159 n n C4 O4 FAD doub 160 n n C4 C4X FAD sing 161 n n C4X N5 FAD doub 162 n n C4X C10 FAD sing 163 n n N5 C5X FAD sing 164 n n C5X C6 FAD doub 165 n y C5X C9A FAD sing 166 n y C6 C7 FAD sing 167 n y C6 H6 FAD sing 168 n n C7 C7M FAD sing 169 n n C7 C8 FAD doub 170 n y C7M HM71 FAD sing 171 n n C7M HM72 FAD sing 172 n n C7M HM73 FAD sing 173 n n C8 C8M FAD sing 174 n n C8 C9 FAD sing 175 n y C8M HM81 FAD sing 176 n n C8M HM82 FAD sing 177 n n C8M HM83 FAD sing 178 n n C9 C9A FAD doub 179 n y C9 H9 FAD sing 180 n n C9A N10 FAD sing 181 n n N10 C10 FAD sing 182 n n N10 C1' FAD sing 183 n n C1' C2' FAD sing 184 n n C1' "H1'1" FAD sing 185 n n C1' "H1'2" FAD sing 186 n n C2' O2' FAD sing 187 n n C2' C3' FAD sing 188 n n C2' H2' FAD sing 189 n n O2' HO2' FAD sing 190 n n C3' O3' FAD sing 191 n n C3' C4' FAD sing 192 n n C3' H3' FAD sing 193 n n O3' HO3' FAD sing 194 n n C4' O4' FAD sing 195 n n C4' C5' FAD sing 196 n n C4' H4' FAD sing 197 n n O4' HO4' FAD sing 198 n n C5' O5' FAD sing 199 n n C5' "H5'1" FAD sing 200 n n C5' "H5'2" FAD sing 201 n n O5' P FAD sing 202 n n P O1P FAD doub 203 n n P O2P FAD sing 204 n n P O3P FAD sing 205 n n O2P HOP2 FAD sing 206 n n # _atom_sites.entry_id 6BTL _atom_sites.fract_transf_matrix[1][1] 0.008499 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008499 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004441 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 501 501 FAD FAD . D 3 SO4 A 1 502 503 SO4 SO4 . E 3 SO4 A 1 503 504 SO4 SO4 . F 3 SO4 A 1 504 505 SO4 SO4 . G 4 RD7 A 1 505 999 RD7 RD7 . H 5 GOL A 1 506 2 GOL GOL . I 3 SO4 A 1 507 1 SO4 SO4 . J 2 FAD B 1 501 501 FAD FAD . K 3 SO4 B 1 502 507 SO4 SO4 . L 6 EPE B 1 503 508 EPE EPE . M 4 RD7 B 1 504 999 RD7 RD7 . N 6 EPE B 1 505 1 EPE EPE . O 5 GOL B 1 506 1 GOL GOL . P 5 GOL B 1 507 3 GOL GOL . Q 5 GOL B 1 508 11 GOL GOL . R 7 HOH A 1 601 5 HOH HOH . R 7 HOH A 2 602 7 HOH HOH . R 7 HOH A 3 603 9 HOH HOH . R 7 HOH A 4 604 8 HOH HOH . S 7 HOH B 1 601 2 HOH HOH . S 7 HOH B 2 602 6 HOH HOH . S 7 HOH B 3 603 4 HOH HOH . S 7 HOH B 4 604 3 HOH HOH . S 7 HOH B 5 605 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . C 2 45.418 -35.498 -0.49 1 78.26 ? PA FAD 501 A 1 HETATM 2 O O1A FAD . . . C 2 44.837 -35.422 -1.853 1 76.93 ? O1A FAD 501 A 1 HETATM 3 O O2A FAD . . . C 2 45.882 -34.159 0.093 1 73.94 ? O2A FAD 501 A 1 HETATM 4 O O5B FAD . . . C 2 46.632 -36.537 -0.456 1 88.82 ? O5B FAD 501 A 1 HETATM 5 C C5B FAD . . . C 2 46.925 -37.39 -1.584 1 86.34 ? C5B FAD 501 A 1 HETATM 6 C C4B FAD . . . C 2 48.366 -37.223 -2.005 1 82.69 ? C4B FAD 501 A 1 HETATM 7 O O4B FAD . . . C 2 49.01 -38.518 -2.068 1 78.93 ? O4B FAD 501 A 1 HETATM 8 C C3B FAD . . . C 2 48.571 -36.583 -3.377 1 87.92 ? C3B FAD 501 A 1 HETATM 9 O O3B FAD . . . C 2 49.699 -35.714 -3.378 1 94.63 ? O3B FAD 501 A 1 HETATM 10 C C2B FAD . . . C 2 48.786 -37.795 -4.287 1 80.97 ? C2B FAD 501 A 1 HETATM 11 O O2B FAD . . . C 2 49.547 -37.458 -5.441 1 77.86 ? O2B FAD 501 A 1 HETATM 12 C C1B FAD . . . C 2 49.565 -38.718 -3.354 1 82.57 ? C1B FAD 501 A 1 HETATM 13 N N9A FAD . . . C 2 49.477 -40.141 -3.685 1 88.65 ? N9A FAD 501 A 1 HETATM 14 C C8A FAD . . . C 2 48.362 -40.84 -4.068 1 92.64 ? C8A FAD 501 A 1 HETATM 15 N N7A FAD . . . C 2 48.579 -42.114 -4.295 1 92.17 ? N7A FAD 501 A 1 HETATM 16 C C5A FAD . . . C 2 49.935 -42.265 -4.041 1 93.67 ? C5A FAD 501 A 1 HETATM 17 C C6A FAD . . . C 2 50.793 -43.38 -4.1 1 96.21 ? C6A FAD 501 A 1 HETATM 18 N N6A FAD . . . C 2 50.394 -44.608 -4.448 1 100.6 ? N6A FAD 501 A 1 HETATM 19 N N1A FAD . . . C 2 52.093 -43.189 -3.785 1 91.74 ? N1A FAD 501 A 1 HETATM 20 C C2A FAD . . . C 2 52.497 -41.964 -3.436 1 92.13 ? C2A FAD 501 A 1 HETATM 21 N N3A FAD . . . C 2 51.783 -40.84 -3.345 1 92.33 ? N3A FAD 501 A 1 HETATM 22 C C4A FAD . . . C 2 50.501 -41.058 -3.663 1 91.51 ? C4A FAD 501 A 1 HETATM 23 N N1 FAD . . . C 2 38.456 -29.512 1.118 1 86.36 ? N1 FAD 501 A 1 HETATM 24 C C2 FAD . . . C 2 38.171 -28.494 1.979 1 78.39 ? C2 FAD 501 A 1 HETATM 25 O O2 FAD . . . C 2 38.239 -28.645 3.204 1 84.11 ? O2 FAD 501 A 1 HETATM 26 N N3 FAD . . . C 2 37.797 -27.26 1.479 1 71.07 ? N3 FAD 501 A 1 HETATM 27 C C4 FAD . . . C 2 37.674 -26.926 0.148 1 80.26 ? C4 FAD 501 A 1 HETATM 28 O O4 FAD . . . C 2 37.332 -25.789 -0.174 1 95.12 ? O4 FAD 501 A 1 HETATM 29 C C4X FAD . . . C 2 37.98 -28.016 -0.759 1 82.7 ? C4X FAD 501 A 1 HETATM 30 N N5 FAD . . . C 2 37.892 -27.793 -2.044 1 84.47 ? N5 FAD 501 A 1 HETATM 31 C C5X FAD . . . C 2 38.185 -28.839 -2.908 1 85.54 ? C5X FAD 501 A 1 HETATM 32 C C6 FAD . . . C 2 38.098 -28.624 -4.283 1 92.44 ? C6 FAD 501 A 1 HETATM 33 C C7 FAD . . . C 2 38.384 -29.643 -5.189 1 80.87 ? C7 FAD 501 A 1 HETATM 34 C C7M FAD . . . C 2 38.279 -29.375 -6.666 1 71.4 ? C7M FAD 501 A 1 HETATM 35 C C8 FAD . . . C 2 38.767 -30.907 -4.71 1 84.8 ? C8 FAD 501 A 1 HETATM 36 C C8M FAD . . . C 2 39.083 -32.032 -5.662 1 80.9 ? C8M FAD 501 A 1 HETATM 37 C C9 FAD . . . C 2 38.855 -31.124 -3.339 1 90.96 ? C9 FAD 501 A 1 HETATM 38 C C9A FAD . . . C 2 38.568 -30.105 -2.44 1 86.42 ? C9A FAD 501 A 1 HETATM 39 N N10 FAD . . . C 2 38.653 -30.295 -1.046 1 87.26 ? N10 FAD 501 A 1 HETATM 40 C C10 FAD . . . C 2 38.363 -29.275 -0.177 1 86.41 ? C10 FAD 501 A 1 HETATM 41 C C1' FAD . . . C 2 39.041 -31.597 -0.492 1 90.07 ? C1' FAD 501 A 1 HETATM 42 C C2' FAD . . . C 2 40.486 -31.64 -0.01 1 89.19 ? C2' FAD 501 A 1 HETATM 43 O O2' FAD . . . C 2 41.367 -31.208 -1.047 1 88.6 ? O2' FAD 501 A 1 HETATM 44 C C3' FAD . . . C 2 40.833 -33.074 0.391 1 88.36 ? C3' FAD 501 A 1 HETATM 45 O O3' FAD . . . C 2 39.8 -33.565 1.238 1 89.39 ? O3' FAD 501 A 1 HETATM 46 C C4' FAD . . . C 2 42.173 -33.234 1.108 1 89.1 ? C4' FAD 501 A 1 HETATM 47 O O4' FAD . . . C 2 43.235 -33.187 0.156 1 106.59 ? O4' FAD 501 A 1 HETATM 48 C C5' FAD . . . C 2 42.251 -34.519 1.903 1 81.88 ? C5' FAD 501 A 1 HETATM 49 O O5' FAD . . . C 2 43.6 -34.692 2.384 1 78.14 ? O5' FAD 501 A 1 HETATM 50 P P FAD . . . C 2 44.402 -36.014 2.102 1 68.8 ? P FAD 501 A 1 HETATM 51 O O1P FAD . . . C 2 45.857 -35.834 2.542 1 80.2 ? O1P FAD 501 A 1 HETATM 52 O O2P FAD . . . C 2 43.704 -37.175 2.706 1 80.33 ? O2P FAD 501 A 1 HETATM 53 O O3P FAD . . . C 2 44.359 -36.117 0.516 1 76.39 ? O3P FAD 501 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 53 #