data_6BTL # _model_server_result.job_id YtXVXzpyh01G3yzPUEcW8A _model_server_result.datetime_utc '2024-11-30 11:49:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6btl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":505}' # _entry.id 6BTL # _exptl.entry_id 6BTL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6BTL _cell.length_a 117.664 _cell.length_b 117.664 _cell.length_c 225.163 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BTL _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_645 y+1,x-1,-z 0 1 0 1 0 0 0 0 -1 117.664 -117.664 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 L N N ? 6 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 55 A CYS 52 1_555 A SG CYS 60 A CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf2 B SG CYS 55 B CYS 52 1_555 B SG CYS 60 B CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 83 n n N1 C6 EPE sing 84 n n N1 C9 EPE sing 85 n n C2 C3 EPE sing 86 n n C2 H21 EPE sing 87 n n C2 H22 EPE sing 88 n n C3 N4 EPE sing 89 n n C3 H31 EPE sing 90 n n C3 H32 EPE sing 91 n n N4 C5 EPE sing 92 n n N4 C7 EPE sing 93 n n C5 C6 EPE sing 94 n n C5 H51 EPE sing 95 n n C5 H52 EPE sing 96 n n C6 H61 EPE sing 97 n n C6 H62 EPE sing 98 n n C7 C8 EPE sing 99 n n C7 H71 EPE sing 100 n n C7 H72 EPE sing 101 n n C8 O8 EPE sing 102 n n C8 H81 EPE sing 103 n n C8 H82 EPE sing 104 n n O8 HO8 EPE sing 105 n n C9 C10 EPE sing 106 n n C9 H91 EPE sing 107 n n C9 H92 EPE sing 108 n n C10 S EPE sing 109 n n C10 H101 EPE sing 110 n n C10 H102 EPE sing 111 n n S O1S EPE doub 112 n n S O2S EPE doub 113 n n S O3S EPE sing 114 n n O3S HOS3 EPE sing 115 n n # _atom_sites.entry_id 6BTL _atom_sites.fract_transf_matrix[1][1] 0.008499 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008499 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004441 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 501 501 FAD FAD . D 3 SO4 A 1 502 503 SO4 SO4 . E 3 SO4 A 1 503 504 SO4 SO4 . F 3 SO4 A 1 504 505 SO4 SO4 . G 4 RD7 A 1 505 999 RD7 RD7 . H 5 GOL A 1 506 2 GOL GOL . I 3 SO4 A 1 507 1 SO4 SO4 . J 2 FAD B 1 501 501 FAD FAD . K 3 SO4 B 1 502 507 SO4 SO4 . L 6 EPE B 1 503 508 EPE EPE . M 4 RD7 B 1 504 999 RD7 RD7 . N 6 EPE B 1 505 1 EPE EPE . O 5 GOL B 1 506 1 GOL GOL . P 5 GOL B 1 507 3 GOL GOL . Q 5 GOL B 1 508 11 GOL GOL . R 7 HOH A 1 601 5 HOH HOH . R 7 HOH A 2 602 7 HOH HOH . R 7 HOH A 3 603 9 HOH HOH . R 7 HOH A 4 604 8 HOH HOH . S 7 HOH B 1 601 2 HOH HOH . S 7 HOH B 2 602 6 HOH HOH . S 7 HOH B 3 603 4 HOH HOH . S 7 HOH B 4 604 3 HOH HOH . S 7 HOH B 5 605 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . N 6 36.972 10.341 19.73 1 147.28 ? N1 EPE 505 B 1 HETATM 2 C C2 EPE . . . N 6 38.082 11.159 19.201 1 138.85 ? C2 EPE 505 B 1 HETATM 3 C C3 EPE . . . N 6 38.216 12.455 19.995 1 131.42 ? C3 EPE 505 B 1 HETATM 4 N N4 EPE . . . N 6 38.49 12.178 21.387 1 127.3 ? N4 EPE 505 B 1 HETATM 5 C C5 EPE . . . N 6 37.941 10.948 21.913 1 134.92 ? C5 EPE 505 B 1 HETATM 6 C C6 EPE . . . N 6 36.672 10.607 21.149 1 143.4 ? C6 EPE 505 B 1 HETATM 7 C C7 EPE . . . N 6 39.634 12.8 22.015 1 121.08 ? C7 EPE 505 B 1 HETATM 8 C C8 EPE . . . N 6 39.58 12.738 23.538 1 117.7 ? C8 EPE 505 B 1 HETATM 9 O O8 EPE . . . N 6 38.319 13.169 24.005 1 116.4 ? O8 EPE 505 B 1 HETATM 10 C C9 EPE . . . N 6 35.754 10.433 18.904 1 148.09 ? C9 EPE 505 B 1 HETATM 11 C C10 EPE . . . N 6 35.104 9.064 18.785 1 151.23 ? C10 EPE 505 B 1 HETATM 12 S S EPE . . . N 6 33.368 9.247 18.312 1 151.53 ? S EPE 505 B 1 HETATM 13 O O1S EPE . . . N 6 32.95 8.097 17.519 1 147.12 ? O1S EPE 505 B 1 HETATM 14 O O2S EPE . . . N 6 33.213 10.466 17.523 1 165.9 ? O2S EPE 505 B 1 HETATM 15 O O3S EPE . . . N 6 32.553 9.345 19.519 1 151.03 ? O3S EPE 505 B 1 HETATM 16 H H21 EPE . . . N 6 37.897 11.391 18.152 1 166.49 ? H21 EPE 505 B 1 HETATM 17 H H22 EPE . . . N 6 39.013 10.595 19.262 1 166.49 ? H22 EPE 505 B 1 HETATM 18 H H31 EPE . . . N 6 37.294 13.029 19.913 1 157.57 ? H31 EPE 505 B 1 HETATM 19 H H32 EPE . . . N 6 39.024 13.056 19.578 1 157.57 ? H32 EPE 505 B 1 HETATM 20 H H51 EPE . . . N 6 37.715 11.067 22.973 1 161.78 ? H51 EPE 505 B 1 HETATM 21 H H52 EPE . . . N 6 38.667 10.142 21.806 1 161.78 ? H52 EPE 505 B 1 HETATM 22 H H61 EPE . . . N 6 35.968 11.436 21.223 1 171.95 ? H61 EPE 505 B 1 HETATM 23 H H62 EPE . . . N 6 36.205 9.728 21.593 1 171.95 ? H62 EPE 505 B 1 HETATM 24 H H71 EPE . . . N 6 39.689 13.842 21.702 1 145.17 ? H71 EPE 505 B 1 HETATM 25 H H72 EPE . . . N 6 40.542 12.305 21.671 1 145.17 ? H72 EPE 505 B 1 HETATM 26 H H81 EPE . . . N 6 40.361 13.373 23.958 1 141.11 ? H81 EPE 505 B 1 HETATM 27 H H82 EPE . . . N 6 39.762 11.716 23.869 1 141.11 ? H82 EPE 505 B 1 HETATM 28 H HO8 EPE . . . N 6 37.754 13.414 23.243 1 139.55 ? HO8 EPE 505 B 1 HETATM 29 H H91 EPE . . . N 6 35.054 11.134 19.359 1 177.58 ? H91 EPE 505 B 1 HETATM 30 H H92 EPE . . . N 6 36.01 10.806 17.912 1 177.58 ? H92 EPE 505 B 1 HETATM 31 H H101 EPE . . . N 6 35.628 8.472 18.034 1 181.35 ? H101 EPE 505 B 1 HETATM 32 H H102 EPE . . . N 6 35.172 8.54 19.738 1 181.35 ? H102 EPE 505 B 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 32 #