data_6BTL # _model_server_result.job_id n29-vkOZNqMHF4F_L5yQkw _model_server_result.datetime_utc '2024-11-05 10:45:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6btl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":506}' # _entry.id 6BTL # _exptl.entry_id 6BTL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6BTL _cell.length_a 117.664 _cell.length_b 117.664 _cell.length_c 225.163 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BTL _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_645 y+1,x-1,-z 0 1 0 1 0 0 0 0 -1 117.664 -117.664 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 O N N ? 5 P N N ? 5 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 55 A CYS 52 1_555 A SG CYS 60 A CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf2 B SG CYS 55 B CYS 52 1_555 B SG CYS 60 B CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 253 n n C1 C2 GOL sing 254 n n C1 H11 GOL sing 255 n n C1 H12 GOL sing 256 n n O1 HO1 GOL sing 257 n n C2 O2 GOL sing 258 n n C2 C3 GOL sing 259 n n C2 H2 GOL sing 260 n n O2 HO2 GOL sing 261 n n C3 O3 GOL sing 262 n n C3 H31 GOL sing 263 n n C3 H32 GOL sing 264 n n O3 HO3 GOL sing 265 n n # _atom_sites.entry_id 6BTL _atom_sites.fract_transf_matrix[1][1] 0.008499 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008499 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004441 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 501 501 FAD FAD . D 3 SO4 A 1 502 503 SO4 SO4 . E 3 SO4 A 1 503 504 SO4 SO4 . F 3 SO4 A 1 504 505 SO4 SO4 . G 4 RD7 A 1 505 999 RD7 RD7 . H 5 GOL A 1 506 2 GOL GOL . I 3 SO4 A 1 507 1 SO4 SO4 . J 2 FAD B 1 501 501 FAD FAD . K 3 SO4 B 1 502 507 SO4 SO4 . L 6 EPE B 1 503 508 EPE EPE . M 4 RD7 B 1 504 999 RD7 RD7 . N 6 EPE B 1 505 1 EPE EPE . O 5 GOL B 1 506 1 GOL GOL . P 5 GOL B 1 507 3 GOL GOL . Q 5 GOL B 1 508 11 GOL GOL . R 7 HOH A 1 601 5 HOH HOH . R 7 HOH A 2 602 7 HOH HOH . R 7 HOH A 3 603 9 HOH HOH . R 7 HOH A 4 604 8 HOH HOH . S 7 HOH B 1 601 2 HOH HOH . S 7 HOH B 2 602 6 HOH HOH . S 7 HOH B 3 603 4 HOH HOH . S 7 HOH B 4 604 3 HOH HOH . S 7 HOH B 5 605 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . O 5 44.708 23.407 -5.609 1 125.68 ? C1 GOL 506 B 1 HETATM 2 O O1 GOL . . . O 5 44.51 23.477 -6.986 1 132.44 ? O1 GOL 506 B 1 HETATM 3 C C2 GOL . . . O 5 44.971 21.922 -5.274 1 117.32 ? C2 GOL 506 B 1 HETATM 4 O O2 GOL . . . O 5 45.719 21.3 -6.259 1 112.76 ? O2 GOL 506 B 1 HETATM 5 C C3 GOL . . . O 5 45.7 21.94 -3.908 1 115.5 ? C3 GOL 506 B 1 HETATM 6 O O3 GOL . . . O 5 44.937 22.729 -3.047 1 113.02 ? O3 GOL 506 B 1 HETATM 7 H H11 GOL . . . O 5 45.456 23.947 -5.307 1 150.68 ? H11 GOL 506 B 1 HETATM 8 H H12 GOL . . . O 5 43.935 23.726 -5.118 1 150.68 ? H12 GOL 506 B 1 HETATM 9 H HO1 GOL . . . O 5 44.73 22.719 -7.3 1 158.8 ? HO1 GOL 506 B 1 HETATM 10 H H2 GOL . . . O 5 44.137 21.43 -5.219 1 140.65 ? H2 GOL 506 B 1 HETATM 11 H HO2 GOL . . . O 5 45.467 20.489 -6.305 1 135.18 ? HO2 GOL 506 B 1 HETATM 12 H H31 GOL . . . O 5 45.824 21.029 -3.598 1 138.47 ? H31 GOL 506 B 1 HETATM 13 H H32 GOL . . . O 5 46.596 22.293 -4.024 1 138.47 ? H32 GOL 506 B 1 HETATM 14 H HO3 GOL . . . O 5 45.323 23.485 -3.003 1 135.5 ? HO3 GOL 506 B 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 355 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 14 #