data_6BU7 # _model_server_result.job_id BPQIAsXKej170bsF-t0o4g _model_server_result.datetime_utc '2024-12-03 12:45:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6bu7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 6BU7 # _exptl.entry_id 6BU7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6BU7 _cell.length_a 117.283 _cell.length_b 117.283 _cell.length_c 224.535 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BU7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 55 A CYS 52 1_555 A SG CYS 60 A CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf2 B SG CYS 55 B CYS 52 1_555 B SG CYS 60 B CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 116 n n PA O2A FAD sing 117 n n PA O5B FAD sing 118 n n PA O3P FAD sing 119 n n O2A HOA2 FAD sing 120 n n O5B C5B FAD sing 121 n n C5B C4B FAD sing 122 n n C5B H51A FAD sing 123 n n C5B H52A FAD sing 124 n n C4B O4B FAD sing 125 n n C4B C3B FAD sing 126 n n C4B H4B FAD sing 127 n n O4B C1B FAD sing 128 n n C3B O3B FAD sing 129 n n C3B C2B FAD sing 130 n n C3B H3B FAD sing 131 n n O3B HO3A FAD sing 132 n n C2B O2B FAD sing 133 n n C2B C1B FAD sing 134 n n C2B H2B FAD sing 135 n n O2B HO2A FAD sing 136 n n C1B N9A FAD sing 137 n n C1B H1B FAD sing 138 n n N9A C8A FAD sing 139 n y N9A C4A FAD sing 140 n y C8A N7A FAD doub 141 n y C8A H8A FAD sing 142 n n N7A C5A FAD sing 143 n y C5A C6A FAD sing 144 n y C5A C4A FAD doub 145 n y C6A N6A FAD sing 146 n n C6A N1A FAD doub 147 n y N6A H61A FAD sing 148 n n N6A H62A FAD sing 149 n n N1A C2A FAD sing 150 n y C2A N3A FAD doub 151 n y C2A H2A FAD sing 152 n n N3A C4A FAD sing 153 n y N1 C2 FAD sing 154 n n N1 C10 FAD doub 155 n n C2 O2 FAD doub 156 n n C2 N3 FAD sing 157 n n N3 C4 FAD sing 158 n n N3 HN3 FAD sing 159 n n C4 O4 FAD doub 160 n n C4 C4X FAD sing 161 n n C4X N5 FAD doub 162 n n C4X C10 FAD sing 163 n n N5 C5X FAD sing 164 n n C5X C6 FAD doub 165 n y C5X C9A FAD sing 166 n y C6 C7 FAD sing 167 n y C6 H6 FAD sing 168 n n C7 C7M FAD sing 169 n n C7 C8 FAD doub 170 n y C7M HM71 FAD sing 171 n n C7M HM72 FAD sing 172 n n C7M HM73 FAD sing 173 n n C8 C8M FAD sing 174 n n C8 C9 FAD sing 175 n y C8M HM81 FAD sing 176 n n C8M HM82 FAD sing 177 n n C8M HM83 FAD sing 178 n n C9 C9A FAD doub 179 n y C9 H9 FAD sing 180 n n C9A N10 FAD sing 181 n n N10 C10 FAD sing 182 n n N10 C1' FAD sing 183 n n C1' C2' FAD sing 184 n n C1' "H1'1" FAD sing 185 n n C1' "H1'2" FAD sing 186 n n C2' O2' FAD sing 187 n n C2' C3' FAD sing 188 n n C2' H2' FAD sing 189 n n O2' HO2' FAD sing 190 n n C3' O3' FAD sing 191 n n C3' C4' FAD sing 192 n n C3' H3' FAD sing 193 n n O3' HO3' FAD sing 194 n n C4' O4' FAD sing 195 n n C4' C5' FAD sing 196 n n C4' H4' FAD sing 197 n n O4' HO4' FAD sing 198 n n C5' O5' FAD sing 199 n n C5' "H5'1" FAD sing 200 n n C5' "H5'2" FAD sing 201 n n O5' P FAD sing 202 n n P O1P FAD doub 203 n n P O2P FAD sing 204 n n P O3P FAD sing 205 n n O2P HOP2 FAD sing 206 n n # _atom_sites.entry_id 6BU7 _atom_sites.fract_transf_matrix[1][1] 0.008526 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008526 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004454 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 501 501 FAD FAD . D 3 SO4 A 1 502 503 SO4 SO4 . E 3 SO4 A 1 503 504 SO4 SO4 . F 3 SO4 A 1 504 505 SO4 SO4 . G 4 RD0 A 1 505 999 RD0 RD0 . H 3 SO4 A 1 506 1 SO4 SO4 . I 2 FAD B 1 501 501 FAD FAD . J 3 SO4 B 1 502 507 SO4 SO4 . K 5 EPE B 1 503 508 EPE EPE . L 4 RD0 B 1 504 999 RD0 RD0 . M 5 EPE B 1 505 1 EPE EPE . N 6 GOL B 1 506 1 GOL GOL . O 6 GOL B 1 507 2 GOL GOL . P 6 GOL B 1 508 3 GOL GOL . Q 6 GOL B 1 509 11 GOL GOL . R 7 HOH A 1 601 17 HOH HOH . R 7 HOH A 2 602 14 HOH HOH . R 7 HOH A 3 603 3 HOH HOH . R 7 HOH A 4 604 12 HOH HOH . R 7 HOH A 5 605 10 HOH HOH . R 7 HOH A 6 606 19 HOH HOH . R 7 HOH A 7 607 6 HOH HOH . R 7 HOH A 8 608 16 HOH HOH . S 7 HOH B 1 601 5 HOH HOH . S 7 HOH B 2 602 1 HOH HOH . S 7 HOH B 3 603 8 HOH HOH . S 7 HOH B 4 604 2 HOH HOH . S 7 HOH B 5 605 4 HOH HOH . S 7 HOH B 6 606 15 HOH HOH . S 7 HOH B 7 607 7 HOH HOH . S 7 HOH B 8 608 18 HOH HOH . S 7 HOH B 9 609 9 HOH HOH . S 7 HOH B 10 610 11 HOH HOH . S 7 HOH B 11 611 13 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . C 2 45.359 -35.293 -0.516 1 74.19 ? PA FAD 501 A 1 HETATM 2 O O1A FAD . . . C 2 44.828 -35.243 -1.898 1 57.91 ? O1A FAD 501 A 1 HETATM 3 O O2A FAD . . . C 2 45.757 -33.921 0.047 1 70.18 ? O2A FAD 501 A 1 HETATM 4 O O5B FAD . . . C 2 46.559 -36.344 -0.423 1 74.26 ? O5B FAD 501 A 1 HETATM 5 C C5B FAD . . . C 2 46.838 -37.263 -1.501 1 73.54 ? C5B FAD 501 A 1 HETATM 6 C C4B FAD . . . C 2 48.269 -37.099 -1.95 1 69.92 ? C4B FAD 501 A 1 HETATM 7 O O4B FAD . . . C 2 48.905 -38.395 -2.038 1 64.46 ? O4B FAD 501 A 1 HETATM 8 C C3B FAD . . . C 2 48.453 -36.44 -3.317 1 78.3 ? C3B FAD 501 A 1 HETATM 9 O O3B FAD . . . C 2 49.539 -35.52 -3.283 1 82.4 ? O3B FAD 501 A 1 HETATM 10 C C2B FAD . . . C 2 48.714 -37.634 -4.242 1 70.66 ? C2B FAD 501 A 1 HETATM 11 O O2B FAD . . . C 2 49.486 -37.279 -5.385 1 74.55 ? O2B FAD 501 A 1 HETATM 12 C C1B FAD . . . C 2 49.496 -38.555 -3.312 1 64.56 ? C1B FAD 501 A 1 HETATM 13 N N9A FAD . . . C 2 49.442 -39.972 -3.672 1 73.81 ? N9A FAD 501 A 1 HETATM 14 C C8A FAD . . . C 2 48.346 -40.675 -4.098 1 78.64 ? C8A FAD 501 A 1 HETATM 15 N N7A FAD . . . C 2 48.583 -41.943 -4.341 1 78.81 ? N7A FAD 501 A 1 HETATM 16 C C5A FAD . . . C 2 49.931 -42.085 -4.054 1 78.7 ? C5A FAD 501 A 1 HETATM 17 C C6A FAD . . . C 2 50.802 -43.191 -4.109 1 82.08 ? C6A FAD 501 A 1 HETATM 18 N N6A FAD . . . C 2 50.426 -44.415 -4.489 1 82.03 ? N6A FAD 501 A 1 HETATM 19 N N1A FAD . . . C 2 52.091 -42.994 -3.754 1 77.78 ? N1A FAD 501 A 1 HETATM 20 C C2A FAD . . . C 2 52.474 -41.771 -3.374 1 80.1 ? C2A FAD 501 A 1 HETATM 21 N N3A FAD . . . C 2 51.745 -40.656 -3.282 1 76.15 ? N3A FAD 501 A 1 HETATM 22 C C4A FAD . . . C 2 50.474 -40.88 -3.637 1 73.06 ? C4A FAD 501 A 1 HETATM 23 N N1 FAD . . . C 2 38.321 -29.39 1.085 1 79.23 ? N1 FAD 501 A 1 HETATM 24 C C2 FAD . . . C 2 38.034 -28.372 1.947 1 71.89 ? C2 FAD 501 A 1 HETATM 25 O O2 FAD . . . C 2 38.117 -28.514 3.173 1 71.31 ? O2 FAD 501 A 1 HETATM 26 N N3 FAD . . . C 2 37.641 -27.144 1.446 1 64.91 ? N3 FAD 501 A 1 HETATM 27 C C4 FAD . . . C 2 37.498 -26.815 0.113 1 72.43 ? C4 FAD 501 A 1 HETATM 28 O O4 FAD . . . C 2 37.139 -25.683 -0.21 1 85.64 ? O4 FAD 501 A 1 HETATM 29 C C4X FAD . . . C 2 37.805 -27.905 -0.793 1 71.66 ? C4X FAD 501 A 1 HETATM 30 N N5 FAD . . . C 2 37.7 -27.688 -2.081 1 71.2 ? N5 FAD 501 A 1 HETATM 31 C C5X FAD . . . C 2 37.999 -28.734 -2.942 1 67.43 ? C5X FAD 501 A 1 HETATM 32 C C6 FAD . . . C 2 37.898 -28.528 -4.318 1 63.06 ? C6 FAD 501 A 1 HETATM 33 C C7 FAD . . . C 2 38.188 -29.549 -5.219 1 66.71 ? C7 FAD 501 A 1 HETATM 34 C C7M FAD . . . C 2 38.064 -29.292 -6.698 1 49.32 ? C7M FAD 501 A 1 HETATM 35 C C8 FAD . . . C 2 38.592 -30.805 -4.737 1 68.87 ? C8 FAD 501 A 1 HETATM 36 C C8M FAD . . . C 2 38.914 -31.933 -5.683 1 62.42 ? C8M FAD 501 A 1 HETATM 37 C C9 FAD . . . C 2 38.693 -31.013 -3.365 1 70.56 ? C9 FAD 501 A 1 HETATM 38 C C9A FAD . . . C 2 38.401 -29.991 -2.47 1 68.07 ? C9A FAD 501 A 1 HETATM 39 N N10 FAD . . . C 2 38.505 -30.173 -1.078 1 70.23 ? N10 FAD 501 A 1 HETATM 40 C C10 FAD . . . C 2 38.211 -29.156 -0.21 1 74.29 ? C10 FAD 501 A 1 HETATM 41 C C1' FAD . . . C 2 38.906 -31.466 -0.526 1 78.89 ? C1' FAD 501 A 1 HETATM 42 C C2' FAD . . . C 2 40.32 -31.471 0.033 1 83.15 ? C2' FAD 501 A 1 HETATM 43 O O2' FAD . . . C 2 41.23 -30.895 -0.906 1 91.38 ? O2' FAD 501 A 1 HETATM 44 C C3' FAD . . . C 2 40.722 -32.914 0.324 1 79.9 ? C3' FAD 501 A 1 HETATM 45 O O3' FAD . . . C 2 39.68 -33.507 1.09 1 88.35 ? O3' FAD 501 A 1 HETATM 46 C C4' FAD . . . C 2 42.036 -33.068 1.085 1 74.18 ? C4' FAD 501 A 1 HETATM 47 O O4' FAD . . . C 2 43.131 -32.942 0.176 1 76.95 ? O4' FAD 501 A 1 HETATM 48 C C5' FAD . . . C 2 42.108 -34.386 1.824 1 68.26 ? C5' FAD 501 A 1 HETATM 49 O O5' FAD . . . C 2 43.434 -34.544 2.367 1 70.31 ? O5' FAD 501 A 1 HETATM 50 P P FAD . . . C 2 44.294 -35.819 2.054 1 70.38 ? P FAD 501 A 1 HETATM 51 O O1P FAD . . . C 2 45.732 -35.572 2.519 1 78.22 ? O1P FAD 501 A 1 HETATM 52 O O2P FAD . . . C 2 43.613 -36.998 2.625 1 70.64 ? O2P FAD 501 A 1 HETATM 53 O O3P FAD . . . C 2 44.269 -35.898 0.464 1 71.49 ? O3P FAD 501 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 63 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 53 #