data_6BU7 # _model_server_result.job_id zLjtcPJefwGDhR948UKSCg _model_server_result.datetime_utc '2024-12-02 15:44:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6bu7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":503}' # _entry.id 6BU7 # _exptl.entry_id 6BU7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6BU7 _cell.length_a 117.283 _cell.length_b 117.283 _cell.length_c 224.535 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BU7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 K N N ? 5 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 55 A CYS 52 1_555 A SG CYS 60 A CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf2 B SG CYS 55 B CYS 52 1_555 B SG CYS 60 B CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 83 n n N1 C6 EPE sing 84 n n N1 C9 EPE sing 85 n n C2 C3 EPE sing 86 n n C2 H21 EPE sing 87 n n C2 H22 EPE sing 88 n n C3 N4 EPE sing 89 n n C3 H31 EPE sing 90 n n C3 H32 EPE sing 91 n n N4 C5 EPE sing 92 n n N4 C7 EPE sing 93 n n C5 C6 EPE sing 94 n n C5 H51 EPE sing 95 n n C5 H52 EPE sing 96 n n C6 H61 EPE sing 97 n n C6 H62 EPE sing 98 n n C7 C8 EPE sing 99 n n C7 H71 EPE sing 100 n n C7 H72 EPE sing 101 n n C8 O8 EPE sing 102 n n C8 H81 EPE sing 103 n n C8 H82 EPE sing 104 n n O8 HO8 EPE sing 105 n n C9 C10 EPE sing 106 n n C9 H91 EPE sing 107 n n C9 H92 EPE sing 108 n n C10 S EPE sing 109 n n C10 H101 EPE sing 110 n n C10 H102 EPE sing 111 n n S O1S EPE doub 112 n n S O2S EPE doub 113 n n S O3S EPE sing 114 n n O3S HOS3 EPE sing 115 n n # _atom_sites.entry_id 6BU7 _atom_sites.fract_transf_matrix[1][1] 0.008526 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008526 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004454 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 501 501 FAD FAD . D 3 SO4 A 1 502 503 SO4 SO4 . E 3 SO4 A 1 503 504 SO4 SO4 . F 3 SO4 A 1 504 505 SO4 SO4 . G 4 RD0 A 1 505 999 RD0 RD0 . H 3 SO4 A 1 506 1 SO4 SO4 . I 2 FAD B 1 501 501 FAD FAD . J 3 SO4 B 1 502 507 SO4 SO4 . K 5 EPE B 1 503 508 EPE EPE . L 4 RD0 B 1 504 999 RD0 RD0 . M 5 EPE B 1 505 1 EPE EPE . N 6 GOL B 1 506 1 GOL GOL . O 6 GOL B 1 507 2 GOL GOL . P 6 GOL B 1 508 3 GOL GOL . Q 6 GOL B 1 509 11 GOL GOL . R 7 HOH A 1 601 17 HOH HOH . R 7 HOH A 2 602 14 HOH HOH . R 7 HOH A 3 603 3 HOH HOH . R 7 HOH A 4 604 12 HOH HOH . R 7 HOH A 5 605 10 HOH HOH . R 7 HOH A 6 606 19 HOH HOH . R 7 HOH A 7 607 6 HOH HOH . R 7 HOH A 8 608 16 HOH HOH . S 7 HOH B 1 601 5 HOH HOH . S 7 HOH B 2 602 1 HOH HOH . S 7 HOH B 3 603 8 HOH HOH . S 7 HOH B 4 604 2 HOH HOH . S 7 HOH B 5 605 4 HOH HOH . S 7 HOH B 6 606 15 HOH HOH . S 7 HOH B 7 607 7 HOH HOH . S 7 HOH B 8 608 18 HOH HOH . S 7 HOH B 9 609 9 HOH HOH . S 7 HOH B 10 610 11 HOH HOH . S 7 HOH B 11 611 13 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . K 5 16.341 22.263 15.191 1 85.48 ? N1 EPE 503 B 1 HETATM 2 C C2 EPE . . . K 5 16.328 22.11 16.658 1 81.86 ? C2 EPE 503 B 1 HETATM 3 C C3 EPE . . . K 5 17.142 20.906 17.125 1 81.13 ? C3 EPE 503 B 1 HETATM 4 N N4 EPE . . . K 5 18.387 20.742 16.396 1 86.83 ? N4 EPE 503 B 1 HETATM 5 C C5 EPE . . . K 5 18.327 20.906 14.961 1 87.33 ? C5 EPE 503 B 1 HETATM 6 C C6 EPE . . . K 5 16.883 21.076 14.519 1 86.48 ? C6 EPE 503 B 1 HETATM 7 C C7 EPE . . . K 5 19.404 19.847 16.922 1 85.75 ? C7 EPE 503 B 1 HETATM 8 C C8 EPE . . . K 5 19.577 19.943 18.434 1 83.19 ? C8 EPE 503 B 1 HETATM 9 O O8 EPE . . . K 5 18.501 19.292 19.081 1 80.96 ? O8 EPE 503 B 1 HETATM 10 C C9 EPE . . . K 5 14.983 22.536 14.701 1 89.1 ? C9 EPE 503 B 1 HETATM 11 C C10 EPE . . . K 5 14.813 24.03 14.463 1 92.56 ? C10 EPE 503 B 1 HETATM 12 S S EPE . . . K 5 13.089 24.516 14.193 1 86.23 ? S EPE 503 B 1 HETATM 13 O O1S EPE . . . K 5 12.175 23.479 14.671 1 72.25 ? O1S EPE 503 B 1 HETATM 14 O O2S EPE . . . K 5 12.854 24.729 12.765 1 88.83 ? O2S EPE 503 B 1 HETATM 15 O O3S EPE . . . K 5 12.871 25.76 14.931 1 88.54 ? O3S EPE 503 B 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 15 #