data_6BW6
#
_model_server_result.job_id            bjZaSQaUfUx4iBLSBr24Lw 
_model_server_result.datetime_utc      '2024-11-26 12:28:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6bw6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":501}' 
#
_entry.id    6BW6 
#
_exptl.entry_id    6BW6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              749.007 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103.49 
_cell.angle_gamma         90 
_cell.entry_id            6BW6 
_cell.length_a            210.615 
_cell.length_b            105.363 
_cell.length_c            148.08 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6BW6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H 1 1 
C,D,I,J,K,L 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 G N N 
? 3 J N N 
? 3 K N N 
#
_chem_comp.formula           'C40 H77 O10 P' 
_chem_comp.formula_weight    749.007 
_chem_comp.id                PGW 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1-Palmitoyl-2-Oleoyl-sn-Glycero-3-[Phospho-(1-glycerol)];PHOSPHATIDYLGLYCEROL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAD C05 PGW sing 235 n n 
CAD HAD PGW sing 236 n n 
CAD HADA PGW sing 237 n n 
OAE CAD PGW sing 238 n n 
OAE HOAE PGW sing 239 n n 
OAF C05 PGW sing 240 n n 
OAF HOAF PGW sing 241 n n 
P O13 PGW sing 242 n n 
P O11 PGW sing 243 n n 
C01 O03 PGW sing 244 n n 
C01 C02 PGW sing 245 n n 
C01 H01 PGW sing 246 n n 
C01 H01A PGW sing 247 n n 
C1 C2 PGW sing 248 n n 
O01 C1 PGW sing 249 n n 
C02 O01 PGW sing 250 n n 
C02 H02 PGW sing 251 n n 
C2 C3 PGW sing 252 n n 
C2 H2 PGW sing 253 n n 
C2 H2A PGW sing 254 n n 
O02 C1 PGW doub 255 n n 
C03 C02 PGW sing 256 n n 
C03 H03 PGW sing 257 n n 
C03 H03A PGW sing 258 n n 
C3 C4 PGW sing 259 n n 
C3 H3 PGW sing 260 n n 
C3 H3A PGW sing 261 n n 
C04 C05 PGW sing 262 n n 
C04 O12 PGW sing 263 n n 
C04 H04 PGW sing 264 n n 
C04 H04A PGW sing 265 n n 
C4 C5 PGW sing 266 n n 
C4 H4 PGW sing 267 n n 
C4 H4A PGW sing 268 n n 
O04 C19 PGW doub 269 n n 
C05 H05 PGW sing 270 n n 
C5 C6 PGW sing 271 n n 
C5 H5 PGW sing 272 n n 
C5 H5A PGW sing 273 n n 
C06 C07 PGW sing 274 n n 
C06 H06 PGW sing 275 n n 
C06 H06A PGW sing 276 n n 
C6 C7 PGW sing 277 n n 
C6 H6 PGW sing 278 n n 
C6 H6A PGW sing 279 n n 
C07 H07 PGW sing 280 n n 
C07 H07A PGW sing 281 n n 
C7 C8 PGW sing 282 n n 
C7 H7 PGW sing 283 n n 
C7 H7A PGW sing 284 n n 
C08 C07 PGW sing 285 n n 
C08 H08 PGW sing 286 n n 
C08 H08A PGW sing 287 n n 
C8 C9 PGW sing 288 n n 
C8 H8 PGW sing 289 n n 
C8 H8A PGW sing 290 n n 
C09 C08 PGW sing 291 n n 
C09 C11 PGW sing 292 n n 
C09 H09 PGW sing 293 n n 
C09 H09A PGW sing 294 n n 
C9 C10 PGW doub 295 z n 
C10 C06 PGW sing 296 n n 
C11 H11 PGW sing 297 n n 
C11 H11A PGW sing 298 n n 
O11 C03 PGW sing 299 n n 
C12 C11 PGW sing 300 n n 
C12 H12 PGW sing 301 n n 
C12 H12A PGW sing 302 n n 
O12 P PGW sing 303 n n 
C13 C12 PGW sing 304 n n 
C13 C14 PGW sing 305 n n 
C13 H13 PGW sing 306 n n 
C13 H13A PGW sing 307 n n 
O13 HO13 PGW sing 308 n n 
C14 H14 PGW sing 309 n n 
C14 H14A PGW sing 310 n n 
C14 H14B PGW sing 311 n n 
O14 P PGW doub 312 n n 
C15 C16 PGW sing 313 n n 
C15 H15 PGW sing 314 n n 
C15 H15A PGW sing 315 n n 
C16 H16 PGW sing 316 n n 
C16 H16A PGW sing 317 n n 
C17 C16 PGW sing 318 n n 
C17 C18 PGW sing 319 n n 
C17 H17 PGW sing 320 n n 
C17 H17A PGW sing 321 n n 
C18 C28 PGW sing 322 n n 
C18 H18 PGW sing 323 n n 
C18 H18A PGW sing 324 n n 
C19 O03 PGW sing 325 n n 
C19 C20 PGW sing 326 n n 
C20 C21 PGW sing 327 n n 
C20 H20 PGW sing 328 n n 
C20 H20A PGW sing 329 n n 
C21 C22 PGW sing 330 n n 
C21 H21 PGW sing 331 n n 
C21 H21A PGW sing 332 n n 
C22 C23 PGW sing 333 n n 
C22 H22 PGW sing 334 n n 
C22 H22A PGW sing 335 n n 
C23 C24 PGW sing 336 n n 
C23 H23 PGW sing 337 n n 
C23 H23A PGW sing 338 n n 
C24 C25 PGW sing 339 n n 
C24 H24 PGW sing 340 n n 
C24 H24A PGW sing 341 n n 
C25 C26 PGW sing 342 n n 
C25 H25 PGW sing 343 n n 
C25 H25A PGW sing 344 n n 
C26 C27 PGW sing 345 n n 
C26 H26 PGW sing 346 n n 
C26 H26A PGW sing 347 n n 
C27 C15 PGW sing 348 n n 
C27 H27 PGW sing 349 n n 
C27 H27A PGW sing 350 n n 
C28 H28 PGW sing 351 n n 
C28 H28A PGW sing 352 n n 
C29 H29 PGW sing 353 n n 
C29 H29A PGW sing 354 n n 
C29 H29B PGW sing 355 n n 
C30 C28 PGW sing 356 n n 
C30 C29 PGW sing 357 n n 
C30 H30 PGW sing 358 n n 
C30 H30A PGW sing 359 n n 
C9 H9 PGW sing 360 n n 
C10 H10 PGW sing 361 n n 
#
_atom_sites.entry_id                     6BW6 
_atom_sites.fract_transf_matrix[1][1]    0.004748 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001139 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009491 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006945 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 TUM A 1 501 409 TUM TUM . 
F 3 PGW A 1 502 410 PGW PGW . 
G 3 PGW B 1 501 410 PGW PGW . 
H 2 TUM B 1 502 409 TUM TUM . 
I 2 TUM C 1 501 409 TUM TUM . 
J 3 PGW C 1 502 410 PGW PGW . 
K 3 PGW C 1 503 410 PGW PGW . 
L 2 TUM D 1 501 409 TUM TUM . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAD PGW . . . G 3 43 4.422 13.21 1 62.18 ? CAD PGW 501 B 1 
HETATM 2 O OAE PGW . . . G 3 42.474 4.944 14.4 1 51.85 ? OAE PGW 501 B 1 
HETATM 3 O OAF PGW . . . G 3 41.853 2.381 13.618 1 70.03 ? OAF PGW 501 B 1 
HETATM 4 P P PGW . . . G 3 40.132 1.981 10.509 1 84.54 ? P PGW 501 B 1 
HETATM 5 C C01 PGW . . . G 3 36.828 2.288 6.626 1 67.44 ? C01 PGW 501 B 1 
HETATM 6 C C1 PGW . . . G 3 35.777 4.314 8.991 1 45.76 ? C1 PGW 501 B 1 
HETATM 7 O O01 PGW . . . G 3 36.367 3.056 8.839 1 67.91 ? O01 PGW 501 B 1 
HETATM 8 C C02 PGW . . . G 3 37.378 2.968 7.878 1 72.71 ? C02 PGW 501 B 1 
HETATM 9 C C2 PGW . . . G 3 34.262 4.397 9.167 1 48.79 ? C2 PGW 501 B 1 
HETATM 10 O O02 PGW . . . G 3 36.431 5.301 8.983 1 35.48 ? O02 PGW 501 B 1 
HETATM 11 C C03 PGW . . . G 3 38.526 2.134 8.44 1 55.37 ? C03 PGW 501 B 1 
HETATM 12 C C3 PGW . . . G 3 33.855 5.435 10.209 1 39.09 ? C3 PGW 501 B 1 
HETATM 13 O O03 PGW . . . G 3 37.908 1.778 5.897 1 56.05 ? O03 PGW 501 B 1 
HETATM 14 C C04 PGW . . . G 3 42.475 2.843 11.33 1 53.55 ? C04 PGW 501 B 1 
HETATM 15 C C4 PGW . . . G 3 33.449 4.762 11.514 1 42.74 ? C4 PGW 501 B 1 
HETATM 16 C C05 PGW . . . G 3 41.999 3.405 12.672 1 63.23 ? C05 PGW 501 B 1 
HETATM 17 C C5 PGW . . . G 3 33.4 5.734 12.684 1 38.13 ? C5 PGW 501 B 1 
HETATM 18 C C06 PGW . . . G 3 31.82 9.791 15.737 1 21.74 ? C06 PGW 501 B 1 
HETATM 19 C C6 PGW . . . G 3 33.01 5.023 13.976 1 34.39 ? C6 PGW 501 B 1 
HETATM 20 C C07 PGW . . . G 3 30.355 9.889 16.151 1 16.86 ? C07 PGW 501 B 1 
HETATM 21 C C7 PGW . . . G 3 33.494 5.762 15.222 1 35.7 ? C7 PGW 501 B 1 
HETATM 22 C C08 PGW . . . G 3 29.511 10.579 15.079 1 17.62 ? C08 PGW 501 B 1 
HETATM 23 C C8 PGW . . . G 3 33.359 7.275 15.096 1 26.49 ? C8 PGW 501 B 1 
HETATM 24 C C09 PGW . . . G 3 28.718 9.58 14.239 1 14.57 ? C09 PGW 501 B 1 
HETATM 25 C C9 PGW . . . G 3 33.263 7.869 16.503 1 26.2 ? C9 PGW 501 B 1 
HETATM 26 C C10 PGW . . . G 3 32.584 8.97 16.781 1 16.57 ? C10 PGW 501 B 1 
HETATM 27 C C11 PGW . . . G 3 28.26 10.179 12.913 1 18.82 ? C11 PGW 501 B 1 
HETATM 28 O O11 PGW . . . G 3 38.844 2.631 9.71 1 52.74 ? O11 PGW 501 B 1 
HETATM 29 C C12 PGW . . . G 3 27.08 9.413 12.326 1 14.8 ? C12 PGW 501 B 1 
HETATM 30 O O12 PGW . . . G 3 41.43 2.994 10.41 1 53.75 ? O12 PGW 501 B 1 
HETATM 31 C C13 PGW . . . G 3 27.064 9.462 10.8 1 29.72 ? C13 PGW 501 B 1 
HETATM 32 O O13 PGW . . . G 3 40.475 0.64 9.906 1 86.24 ? O13 PGW 501 B 1 
HETATM 33 C C14 PGW . . . G 3 25.801 8.826 10.22 1 33.2 ? C14 PGW 501 B 1 
HETATM 34 O O14 PGW . . . G 3 39.758 1.781 11.957 1 79.63 ? O14 PGW 501 B 1 
HETATM 35 H HAD PGW . . . G 3 43.125 5.135 12.564 1 74.62 ? HAD PGW 501 B 1 
HETATM 36 H HADA PGW . . . G 3 43.848 3.986 13.388 1 74.62 ? HADA PGW 501 B 1 
HETATM 37 H HOAE PGW . . . G 3 41.727 4.573 14.566 1 62.21 ? HOAE PGW 501 B 1 
HETATM 38 H HOAF PGW . . . G 3 42.03 1.633 13.255 1 84.03 ? HOAF PGW 501 B 1 
HETATM 39 H H01 PGW . . . G 3 36.234 1.564 6.88 1 80.93 ? H01 PGW 501 B 1 
HETATM 40 H H01A PGW . . . G 3 36.345 2.934 6.087 1 80.93 ? H01A PGW 501 B 1 
HETATM 41 H H02 PGW . . . G 3 37.697 3.857 7.655 1 87.25 ? H02 PGW 501 B 1 
HETATM 42 H H2 PGW . . . G 3 33.93 3.528 9.443 1 58.55 ? H2 PGW 501 B 1 
HETATM 43 H H2A PGW . . . G 3 33.86 4.631 8.316 1 58.55 ? H2A PGW 501 B 1 
HETATM 44 H H03 PGW . . . G 3 39.297 2.21 7.857 1 66.45 ? H03 PGW 501 B 1 
HETATM 45 H H03A PGW . . . G 3 38.254 1.205 8.508 1 66.45 ? H03A PGW 501 B 1 
HETATM 46 H H3 PGW . . . G 3 33.107 5.951 9.869 1 46.91 ? H3 PGW 501 B 1 
HETATM 47 H H3A PGW . . . G 3 34.603 6.03 10.376 1 46.91 ? H3A PGW 501 B 1 
HETATM 48 H H04 PGW . . . G 3 43.254 3.334 11.026 1 64.26 ? H04 PGW 501 B 1 
HETATM 49 H H04A PGW . . . G 3 42.695 1.903 11.427 1 64.26 ? H04A PGW 501 B 1 
HETATM 50 H H4 PGW . . . G 3 34.087 4.06 11.717 1 51.29 ? H4 PGW 501 B 1 
HETATM 51 H H4A PGW . . . G 3 32.571 4.364 11.401 1 51.29 ? H4A PGW 501 B 1 
HETATM 52 H H05 PGW . . . G 3 41.142 3.842 12.545 1 75.88 ? H05 PGW 501 B 1 
HETATM 53 H H5 PGW . . . G 3 32.749 6.428 12.494 1 45.76 ? H5 PGW 501 B 1 
HETATM 54 H H5A PGW . . . G 3 34.273 6.141 12.797 1 45.76 ? H5A PGW 501 B 1 
HETATM 55 H H06 PGW . . . G 3 31.884 9.356 14.872 1 26.09 ? H06 PGW 501 B 1 
HETATM 56 H H06A PGW . . . G 3 32.201 10.681 15.682 1 26.09 ? H06A PGW 501 B 1 
HETATM 57 H H6 PGW . . . G 3 33.393 4.132 13.972 1 41.27 ? H6 PGW 501 B 1 
HETATM 58 H H6A PGW . . . G 3 32.043 4.948 14.013 1 41.27 ? H6A PGW 501 B 1 
HETATM 59 H H07 PGW . . . G 3 30.292 10.394 16.976 1 20.23 ? H07 PGW 501 B 1 
HETATM 60 H H07A PGW . . . G 3 30.008 8.995 16.299 1 20.23 ? H07A PGW 501 B 1 
HETATM 61 H H7 PGW . . . G 3 34.427 5.543 15.373 1 42.85 ? H7 PGW 501 B 1 
HETATM 62 H H7A PGW . . . G 3 32.975 5.464 15.985 1 42.85 ? H7A PGW 501 B 1 
HETATM 63 H H08 PGW . . . G 3 30.097 11.086 14.496 1 21.14 ? H08 PGW 501 B 1 
HETATM 64 H H08A PGW . . . G 3 28.892 11.188 15.511 1 21.14 ? H08A PGW 501 B 1 
HETATM 65 H H8 PGW . . . G 3 32.558 7.49 14.595 1 31.78 ? H8 PGW 501 B 1 
HETATM 66 H H8A PGW . . . G 3 34.136 7.635 14.641 1 31.78 ? H8A PGW 501 B 1 
HETATM 67 H H09 PGW . . . G 3 27.939 9.296 14.741 1 17.48 ? H09 PGW 501 B 1 
HETATM 68 H H09A PGW . . . G 3 29.276 8.808 14.059 1 17.48 ? H09A PGW 501 B 1 
HETATM 69 H H11 PGW . . . G 3 28.998 10.153 12.283 1 22.58 ? H11 PGW 501 B 1 
HETATM 70 H H11A PGW . . . G 3 27.998 11.101 13.056 1 22.58 ? H11A PGW 501 B 1 
HETATM 71 H H12 PGW . . . G 3 26.256 9.799 12.662 1 17.76 ? H12 PGW 501 B 1 
HETATM 72 H H12A PGW . . . G 3 27.133 8.487 12.61 1 17.76 ? H12A PGW 501 B 1 
HETATM 73 H H13 PGW . . . G 3 27.839 8.988 10.461 1 35.66 ? H13 PGW 501 B 1 
HETATM 74 H H13A PGW . . . G 3 27.11 10.388 10.514 1 35.66 ? H13A PGW 501 B 1 
HETATM 75 H H14 PGW . . . G 3 25.811 8.909 9.254 1 39.84 ? H14 PGW 501 B 1 
HETATM 76 H H14A PGW . . . G 3 25.019 9.278 10.574 1 39.84 ? H14A PGW 501 B 1 
HETATM 77 H H14B PGW . . . G 3 25.77 7.888 10.463 1 39.84 ? H14B PGW 501 B 1 
HETATM 78 H H9 PGW . . . G 3 33.7 7.432 17.198 1 31.44 ? H9 PGW 501 B 1 
HETATM 79 H H10 PGW . . . G 3 32.575 9.267 17.662 1 19.89 ? H10 PGW 501 B 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    31 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           79 
#