data_6BW8
#
_model_server_result.job_id            NldDvFtZfH1132ecm4WS8A 
_model_server_result.datetime_utc      '2024-11-22 11:29:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6bw8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":400}' 
#
_entry.id    6BW8 
#
_exptl.entry_id    6BW8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              712.664 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '7-{8-chloro-11-[3-(4-chloro-3,5-dimethylphenoxy)propyl]-1-oxo-7-(1,3,5-trimethyl-1H-pyrazol-4-yl)-4,5-dihydro-1H-[1,4]diazepino[1,2-a]indol-2(3H)-yl}-1-methyl-1H-indole-3-carboxylic acid' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.12 
_cell.angle_gamma         90 
_cell.entry_id            6BW8 
_cell.length_a            39.178 
_cell.length_b            135.397 
_cell.length_c            95.75 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6BW8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E 1 1 
B,F 2 1 
C,G 3 1 
D,H 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C39 H39 Cl2 N5 O4' 
_chem_comp.formula_weight    712.664 
_chem_comp.id                ECM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '7-{8-chloro-11-[3-(4-chloro-3,5-dimethylphenoxy)propyl]-1-oxo-7-(1,3,5-trimethyl-1H-pyrazol-4-yl)-4,5-dihydro-1H-[1,4]diazepino[1,2-a]indol-2(3H)-yl}-1-methyl-1H-indole-3-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C01 C02 ECM sing 83 n n 
C02 C50 ECM doub 84 n y 
C02 C03 ECM sing 85 n y 
C50 C08 ECM sing 86 n y 
CL04 C03 ECM sing 87 n n 
C03 C05 ECM doub 88 n y 
O29 C27 ECM doub 89 n n 
C08 O09 ECM sing 90 n n 
C08 C07 ECM doub 91 n y 
O09 C10 ECM sing 92 n n 
C11 C12 ECM sing 93 n n 
C11 C10 ECM sing 94 n n 
C12 C13 ECM sing 95 n n 
C25 N23 ECM sing 96 n y 
C25 C26 ECM doub 97 n y 
C24 N23 ECM sing 98 n n 
C27 C26 ECM sing 99 n n 
C27 O28 ECM sing 100 n n 
N23 C22 ECM sing 101 n y 
C05 C07 ECM sing 102 n y 
C05 C06 ECM sing 103 n n 
C26 C21 ECM sing 104 n y 
C13 C36 ECM sing 105 n y 
C13 C14 ECM doub 106 n y 
C22 C21 ECM doub 107 n y 
C22 C17 ECM sing 108 n y 
C21 C20 ECM sing 109 n y 
C37 C36 ECM doub 110 n y 
C37 C38 ECM sing 111 n y 
O33 C15 ECM doub 112 n n 
C36 C35 ECM sing 113 n y 
C15 C14 ECM sing 114 n n 
C15 N16 ECM sing 115 n n 
C14 N34 ECM sing 116 n y 
C17 N16 ECM sing 117 n n 
C17 C18 ECM doub 118 n y 
N16 C30 ECM sing 119 n n 
C20 C19 ECM doub 120 n y 
C38 C39 ECM doub 121 n y 
C30 C31 ECM sing 122 n n 
C35 N34 ECM sing 123 n y 
C35 C41 ECM doub 124 n y 
C18 C19 ECM sing 125 n y 
N34 C32 ECM sing 126 n n 
C39 C41 ECM sing 127 n y 
C39 CL40 ECM sing 128 n n 
C41 C42 ECM sing 129 n n 
C31 C32 ECM sing 130 n n 
C44 C43 ECM sing 131 n n 
C42 C43 ECM doub 132 n y 
C42 C48 ECM sing 133 n y 
C43 N45 ECM sing 134 n y 
C48 C49 ECM sing 135 n n 
C48 N47 ECM doub 136 n y 
N45 N47 ECM sing 137 n y 
N45 C46 ECM sing 138 n n 
C10 H1 ECM sing 139 n n 
C10 H2 ECM sing 140 n n 
C20 H3 ECM sing 141 n n 
C24 H4 ECM sing 142 n n 
C24 H5 ECM sing 143 n n 
C24 H6 ECM sing 144 n n 
C01 H7 ECM sing 145 n n 
C01 H8 ECM sing 146 n n 
C01 H9 ECM sing 147 n n 
C06 H10 ECM sing 148 n n 
C06 H11 ECM sing 149 n n 
C06 H12 ECM sing 150 n n 
C07 H13 ECM sing 151 n n 
C11 H14 ECM sing 152 n n 
C11 H15 ECM sing 153 n n 
C12 H16 ECM sing 154 n n 
C12 H17 ECM sing 155 n n 
C18 H18 ECM sing 156 n n 
C19 H19 ECM sing 157 n n 
C25 H20 ECM sing 158 n n 
C30 H21 ECM sing 159 n n 
C30 H22 ECM sing 160 n n 
C31 H23 ECM sing 161 n n 
C31 H24 ECM sing 162 n n 
C32 H25 ECM sing 163 n n 
C32 H26 ECM sing 164 n n 
C37 H27 ECM sing 165 n n 
C38 H28 ECM sing 166 n n 
C44 H29 ECM sing 167 n n 
C44 H30 ECM sing 168 n n 
C44 H31 ECM sing 169 n n 
C46 H32 ECM sing 170 n n 
C46 H33 ECM sing 171 n n 
C46 H34 ECM sing 172 n n 
C49 H35 ECM sing 173 n n 
C49 H36 ECM sing 174 n n 
C49 H37 ECM sing 175 n n 
C50 H38 ECM sing 176 n n 
O28 H39 ECM sing 177 n n 
#
_atom_sites.entry_id                     6BW8 
_atom_sites.fract_transf_matrix[1][1]    0.025525 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000053 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007386 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010444 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 ECM A 1 400 400 ECM LIG . 
F 2 ECM B 1 400 400 ECM LIG . 
G 2 ECM C 1 400 400 ECM LIG . 
H 2 ECM D 1 400 400 ECM LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 ECM . . . H 2 1.709 -2.543 0.309 1 53.03 ? C10 ECM 400 D 1 
HETATM 2 C C13 ECM . . . H 2 1.853 -5.874 0.757 1 55.7 ? C13 ECM 400 D 1 
HETATM 3 C C15 ECM . . . H 2 -0.025 -7.734 1.37 1 58.71 ? C15 ECM 400 D 1 
HETATM 4 C C17 ECM . . . H 2 -1.041 -9.643 2.672 1 58.31 ? C17 ECM 400 D 1 
HETATM 5 C C20 ECM . . . H 2 -3.419 -10.72 3.718 1 59.09 ? C20 ECM 400 D 1 
HETATM 6 C C21 ECM . . . H 2 -2.258 -10.643 4.528 1 58.95 ? C21 ECM 400 D 1 
HETATM 7 C C22 ECM . . . H 2 -1.046 -10.107 4.029 1 58.47 ? C22 ECM 400 D 1 
HETATM 8 C C24 ECM . . . H 2 1.255 -9.744 5.101 1 57.91 ? C24 ECM 400 D 1 
HETATM 9 C C26 ECM . . . H 2 -2.011 -11.047 5.885 1 59.06 ? C26 ECM 400 D 1 
HETATM 10 C C01 ECM . . . H 2 4.351 1.656 -0.503 1 51.65 ? C01 ECM 400 D 1 
HETATM 11 C C02 ECM . . . H 2 3.431 0.797 -1.352 1 52.4 ? C02 ECM 400 D 1 
HETATM 12 C C03 ECM . . . H 2 3.316 1.029 -2.719 1 52.41 ? C03 ECM 400 D 1 
HETATM 13 C C05 ECM . . . H 2 2.47 0.24 -3.489 1 52.56 ? C05 ECM 400 D 1 
HETATM 14 C C06 ECM . . . H 2 2.334 0.492 -5.007 1 52.52 ? C06 ECM 400 D 1 
HETATM 15 C C07 ECM . . . H 2 1.74 -0.788 -2.893 1 52.81 ? C07 ECM 400 D 1 
HETATM 16 C C08 ECM . . . H 2 1.857 -1.016 -1.53 1 52.63 ? C08 ECM 400 D 1 
HETATM 17 C C11 ECM . . . H 2 0.732 -3.552 0.98 1 53.57 ? C11 ECM 400 D 1 
HETATM 18 C C12 ECM . . . H 2 1.507 -4.705 1.691 1 53.96 ? C12 ECM 400 D 1 
HETATM 19 C C14 ECM . . . H 2 1.189 -7.124 0.654 1 57.56 ? C14 ECM 400 D 1 
HETATM 20 C C18 ECM . . . H 2 -2.212 -9.715 1.896 1 58.56 ? C18 ECM 400 D 1 
HETATM 21 C C19 ECM . . . H 2 -3.408 -10.257 2.409 1 58.95 ? C19 ECM 400 D 1 
HETATM 22 C C25 ECM . . . H 2 -0.688 -10.718 6.129 1 58.63 ? C25 ECM 400 D 1 
HETATM 23 C C27 ECM . . . H 2 -3.029 -11.695 6.865 1 59.12 ? C27 ECM 400 D 1 
HETATM 24 C C30 ECM . . . H 2 1.375 -9.697 1.863 1 58.76 ? C30 ECM 400 D 1 
HETATM 25 C C31 ECM . . . H 2 1.572 -10.265 0.468 1 59.39 ? C31 ECM 400 D 1 
HETATM 26 C C32 ECM . . . H 2 1.25 -9.199 -0.545 1 58.76 ? C32 ECM 400 D 1 
HETATM 27 C C35 ECM . . . H 2 2.834 -7.22 -0.802 1 56.91 ? C35 ECM 400 D 1 
HETATM 28 C C36 ECM . . . H 2 2.935 -5.966 -0.21 1 56.24 ? C36 ECM 400 D 1 
HETATM 29 C C37 ECM . . . H 2 3.958 -5.082 -0.602 1 55.6 ? C37 ECM 400 D 1 
HETATM 30 C C38 ECM . . . H 2 4.868 -5.476 -1.594 1 55.57 ? C38 ECM 400 D 1 
HETATM 31 C C39 ECM . . . H 2 4.756 -6.744 -2.178 1 55.52 ? C39 ECM 400 D 1 
HETATM 32 C C41 ECM . . . H 2 3.756 -7.619 -1.806 1 56.86 ? C41 ECM 400 D 1 
HETATM 33 C C42 ECM . . . H 2 3.656 -9.027 -2.454 1 57.21 ? C42 ECM 400 D 1 
HETATM 34 C C43 ECM . . . H 2 4.249 -10.246 -1.952 1 59.27 ? C43 ECM 400 D 1 
HETATM 35 C C44 ECM . . . H 2 5.115 -10.398 -0.701 1 57.86 ? C44 ECM 400 D 1 
HETATM 36 C C46 ECM . . . H 2 4.316 -12.592 -2.63 1 60.82 ? C46 ECM 400 D 1 
HETATM 37 C C48 ECM . . . H 2 2.957 -9.432 -3.6 1 59.35 ? C48 ECM 400 D 1 
HETATM 38 C C49 ECM . . . H 2 2.139 -8.534 -4.518 1 57.58 ? C49 ECM 400 D 1 
HETATM 39 C C50 ECM . . . H 2 2.701 -0.226 -0.759 1 52.47 ? C50 ECM 400 D 1 
HETATM 40 N N16 ECM . . . H 2 0.127 -9.018 1.977 1 58.47 ? N16 ECM 400 D 1 
HETATM 41 N N23 ECM . . . H 2 -0.137 -10.166 5.042 1 58.28 ? N23 ECM 400 D 1 
HETATM 42 N N34 ECM . . . H 2 1.769 -7.876 -0.244 1 57.82 ? N34 ECM 400 D 1 
HETATM 43 N N45 ECM . . . H 2 3.91 -11.208 -2.774 1 59.05 ? N45 ECM 400 D 1 
HETATM 44 N N47 ECM . . . H 2 3.157 -10.745 -3.74 1 59.14 ? N47 ECM 400 D 1 
HETATM 45 O O09 ECM . . . H 2 1.1 -2.069 -0.904 1 52.91 ? O09 ECM 400 D 1 
HETATM 46 O O28 ECM . . . H 2 -3.796 -12.607 6.446 1 59.97 -1 O28 ECM 400 D 1 
HETATM 47 O O29 ECM . . . H 2 -3.095 -11.306 8.062 1 58.68 ? O29 ECM 400 D 1 
HETATM 48 O O33 ECM . . . H 2 -1.048 -7.13 1.427 1 59.83 ? O33 ECM 400 D 1 
HETATM 49 CL CL04 ECM . . . H 2 4.24 2.321 -3.484 1 51.72 ? CL04 ECM 400 D 1 
HETATM 50 CL CL40 ECM . . . H 2 5.888 -7.206 -3.393 1 55.9 ? CL40 ECM 400 D 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           267 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           50 
#