data_6BWJ # _model_server_result.job_id VMoADhgiwgNBU4-aNiiDzw _model_server_result.datetime_utc '2024-11-21 14:00:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6bwj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1001}' # _entry.id 6BWJ # _exptl.entry_id 6BWJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 628.708 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description resiniferatoxin _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6BWJ _cell.length_a 90.054 _cell.length_b 121.226 _cell.length_c 185.557 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BWJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # _chem_comp.formula 'C37 H40 O9' _chem_comp.formula_weight 628.708 _chem_comp.id 6EU _chem_comp.mon_nstd_flag . _chem_comp.name resiniferatoxin _chem_comp.type non-polymer _chem_comp.pdbx_synonyms RTX # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAI CBS 6EU sing 1 n n CBR CBS 6EU doub 2 n y CBR CBP 6EU sing 3 n y CBS CBQ 6EU sing 4 n y CBP CBN 6EU doub 5 n y CBT OAH 6EU sing 6 n n CBQ OAH 6EU sing 7 n n CBQ CBO 6EU doub 8 n y CBN CBO 6EU sing 9 n y CBN CBM 6EU sing 10 n n CBM CBK 6EU sing 11 n n CBD CAV 6EU sing 12 n n OAF CBK 6EU sing 13 n n OAF CBC 6EU sing 14 n n CBK OAG 6EU doub 15 n n CBB CAV 6EU doub 16 n n CAV CAM 6EU sing 17 n n CBC CAX 6EU sing 18 n n CAL OAB 6EU sing 19 n n CAL CAM 6EU sing 20 n n CAL CAK 6EU sing 21 n n OAB CAQ 6EU sing 22 n n CAS CAX 6EU doub 23 n n CAS CAK 6EU sing 24 n n CAM OAC 6EU sing 25 n n CAM CAP 6EU sing 26 n n CAX CAU 6EU sing 27 n n CAK CAJ 6EU sing 28 n n CBH CBJ 6EU doub 29 n y CBH CBE 6EU sing 30 n y OAC CAQ 6EU sing 31 n n CAQ CAY 6EU sing 32 n n CAQ OAA 6EU sing 33 n n CBJ CBL 6EU sing 34 n y CAP CAN 6EU sing 35 n n CAY CBE 6EU sing 36 n n CAU CAR 6EU sing 37 n n OAD CAR 6EU sing 38 n n CBE CBG 6EU doub 39 n y CAJ OAA 6EU sing 40 n n CAJ CAN 6EU sing 41 n n CAJ CAO 6EU sing 42 n n CAN CAT 6EU sing 43 n n CAR CAO 6EU sing 44 n n CAR CAZ 6EU sing 45 n n CBL CBI 6EU doub 46 n y CAO CAW 6EU sing 47 n n CBG CBI 6EU sing 48 n y CAZ OAE 6EU doub 49 n n CAZ CBA 6EU sing 50 n n CAW CBA 6EU doub 51 n n CBA CBF 6EU sing 52 n n CBT H1 6EU sing 53 n n CBT H2 6EU sing 54 n n CBT H3 6EU sing 55 n n CBO HBS 6EU sing 56 n n OAI HAI 6EU sing 57 n n CBR HBU 6EU sing 58 n n CBP HBT 6EU sing 59 n n CBM H4 6EU sing 60 n n CBM H5 6EU sing 61 n n CBC H6 6EU sing 62 n n CBC H7 6EU sing 63 n n CAS H8 6EU sing 64 n n CAK H9 6EU sing 65 n n CAU H10 6EU sing 66 n n CAU H11 6EU sing 67 n n OAD HAD 6EU sing 68 n n CBF H12 6EU sing 69 n n CBF H13 6EU sing 70 n n CBF H14 6EU sing 71 n n CAW H15 6EU sing 72 n n CAO H16 6EU sing 73 n n CAN H17 6EU sing 74 n n CAT H18 6EU sing 75 n n CAT H19 6EU sing 76 n n CAT H20 6EU sing 77 n n CAP H21 6EU sing 78 n n CAP H22 6EU sing 79 n n CBB H24 6EU sing 80 n n CBB H25 6EU sing 81 n n CBD H27 6EU sing 82 n n CBD H28 6EU sing 83 n n CBD H29 6EU sing 84 n n CAL H30 6EU sing 85 n n CAY H31 6EU sing 86 n n CAY H32 6EU sing 87 n n CBG HBL 6EU sing 88 n n CBI HBN 6EU sing 89 n n CBL HBP 6EU sing 90 n n CBJ HBO 6EU sing 91 n n CBH HBM 6EU sing 92 n n # _atom_sites.entry_id 6BWJ _atom_sites.fract_transf_matrix[1][1] 0.011104 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008249 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005389 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 6EU A 1 1001 1001 6EU 6EU . D 3 CA B 1 801 1 CA CA . E 3 CA B 1 802 2 CA CA . F 2 6EU B 1 803 1001 6EU 6EU . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CBT 6EU . . . C 2 -40.349 13.926 18.206 1 99.81 ? CBT 6EU 1001 A 1 HETATM 2 O OAH 6EU . . . C 2 -39.371 12.912 18.305 1 108.57 ? OAH 6EU 1001 A 1 HETATM 3 C CBQ 6EU . . . C 2 -38.171 13.221 18.985 1 110.47 ? CBQ 6EU 1001 A 1 HETATM 4 C CBO 6EU . . . C 2 -36.916 12.867 18.426 1 98.6 ? CBO 6EU 1001 A 1 HETATM 5 C CBS 6EU . . . C 2 -38.214 13.869 20.233 1 111.11 ? CBS 6EU 1001 A 1 HETATM 6 O OAI 6EU . . . C 2 -39.46 14.214 20.773 1 117.69 ? OAI 6EU 1001 A 1 HETATM 7 C CBR 6EU . . . C 2 -37.052 14.17 20.906 1 96.82 ? CBR 6EU 1001 A 1 HETATM 8 C CBP 6EU . . . C 2 -35.808 13.822 20.35 1 89.46 ? CBP 6EU 1001 A 1 HETATM 9 C CBN 6EU . . . C 2 -35.76 13.164 19.101 1 91.7 ? CBN 6EU 1001 A 1 HETATM 10 C CBM 6EU . . . C 2 -34.384 12.781 18.48 1 91.28 ? CBM 6EU 1001 A 1 HETATM 11 C CBK 6EU . . . C 2 -34.041 11.3 18.67 1 95.75 ? CBK 6EU 1001 A 1 HETATM 12 O OAG 6EU . . . C 2 -34.891 10.515 18.936 1 98.33 ? OAG 6EU 1001 A 1 HETATM 13 O OAF 6EU . . . C 2 -32.675 10.868 18.518 1 97.61 ? OAF 6EU 1001 A 1 HETATM 14 C CBC 6EU . . . C 2 -32.512 9.763 17.648 1 88.62 ? CBC 6EU 1001 A 1 HETATM 15 C CAX 6EU . . . C 2 -31.431 8.824 18.286 1 98.03 ? CAX 6EU 1001 A 1 HETATM 16 C CAS 6EU . . . C 2 -31.881 7.408 18.858 1 96.27 ? CAS 6EU 1001 A 1 HETATM 17 C CAK 6EU . . . C 2 -31.595 7 20.454 1 93.75 ? CAK 6EU 1001 A 1 HETATM 18 C CAU 6EU . . . C 2 -30.036 9.398 18.653 1 108.52 ? CAU 6EU 1001 A 1 HETATM 19 C CAR 6EU . . . C 2 -29.339 8.777 19.858 1 107.66 ? CAR 6EU 1001 A 1 HETATM 20 O OAD 6EU . . . C 2 -29.944 9.152 21.039 1 101.34 ? OAD 6EU 1001 A 1 HETATM 21 C CAZ 6EU . . . C 2 -27.912 9.392 19.877 1 110.46 ? CAZ 6EU 1001 A 1 HETATM 22 O OAE 6EU . . . C 2 -27.62 10.465 19.529 1 113.54 ? OAE 6EU 1001 A 1 HETATM 23 C CBA 6EU . . . C 2 -26.978 8.355 20.415 1 103.51 ? CBA 6EU 1001 A 1 HETATM 24 C CBF 6EU . . . C 2 -25.544 8.618 20.896 1 109.57 ? CBF 6EU 1001 A 1 HETATM 25 C CAW 6EU . . . C 2 -27.697 7.025 20.332 1 90.02 ? CAW 6EU 1001 A 1 HETATM 26 C CAO 6EU . . . C 2 -29.119 7.292 19.78 1 96.79 ? CAO 6EU 1001 A 1 HETATM 27 C CAJ 6EU . . . C 2 -30.211 6.373 20.571 1 92.84 ? CAJ 6EU 1001 A 1 HETATM 28 O OAA 6EU . . . C 2 -30.222 5.038 19.982 1 108.39 ? OAA 6EU 1001 A 1 HETATM 29 C CAN 6EU . . . C 2 -29.826 6.285 22.045 1 90.84 ? CAN 6EU 1001 A 1 HETATM 30 C CAT 6EU . . . C 2 -28.86 5.071 22.334 1 106.67 ? CAT 6EU 1001 A 1 HETATM 31 C CAP 6EU . . . C 2 -31.027 6.166 22.965 1 102.7 ? CAP 6EU 1001 A 1 HETATM 32 C CAM 6EU . . . C 2 -32.106 5.333 22.313 1 104.9 ? CAM 6EU 1001 A 1 HETATM 33 C CAV 6EU . . . C 2 -33.257 4.953 23.182 1 90.62 ? CAV 6EU 1001 A 1 HETATM 34 C CBB 6EU . . . C 2 -33.692 5.766 24.223 1 86.74 ? CBB 6EU 1001 A 1 HETATM 35 C CBD 6EU . . . C 2 -33.969 3.617 22.907 1 102.88 ? CBD 6EU 1001 A 1 HETATM 36 O OAC 6EU . . . C 2 -31.456 4.181 21.754 1 102.97 ? OAC 6EU 1001 A 1 HETATM 37 C CAL 6EU . . . C 2 -32.572 5.982 20.86 1 103.02 ? CAL 6EU 1001 A 1 HETATM 38 O OAB 6EU . . . C 2 -32.501 5.007 19.97 1 101.53 ? OAB 6EU 1001 A 1 HETATM 39 C CAQ 6EU . . . C 2 -31.404 4.309 20.351 1 104.97 ? CAQ 6EU 1001 A 1 HETATM 40 C CAY 6EU . . . C 2 -31.416 2.917 19.68 1 101.84 ? CAY 6EU 1001 A 1 HETATM 41 C CBE 6EU . . . C 2 -30.097 2.095 19.934 1 107.58 ? CBE 6EU 1001 A 1 HETATM 42 C CBG 6EU . . . C 2 -29.199 1.916 18.908 1 107.16 ? CBG 6EU 1001 A 1 HETATM 43 C CBI 6EU . . . C 2 -28.03 1.18 19.125 1 107.99 ? CBI 6EU 1001 A 1 HETATM 44 C CBL 6EU . . . C 2 -27.781 0.624 20.388 1 116.5 ? CBL 6EU 1001 A 1 HETATM 45 C CBJ 6EU . . . C 2 -28.682 0.799 21.415 1 117.12 ? CBJ 6EU 1001 A 1 HETATM 46 C CBH 6EU . . . C 2 -29.85 1.531 21.203 1 106.52 ? CBH 6EU 1001 A 1 HETATM 47 H H1 6EU . . . C 2 -41.125 13.657 18.66 1 119.78 ? H1 6EU 1001 A 1 HETATM 48 H H2 6EU . . . C 2 -40.551 14.081 17.303 1 119.78 ? H2 6EU 1001 A 1 HETATM 49 H H3 6EU . . . C 2 -40.018 14.716 18.592 1 119.78 ? H3 6EU 1001 A 1 HETATM 50 H HBS 6EU . . . C 2 -36.877 12.435 17.605 1 118.32 ? HBS 6EU 1001 A 1 HETATM 51 H HAI 6EU . . . C 2 -39.935 13.533 20.835 1 141.23 ? HAI 6EU 1001 A 1 HETATM 52 H HBU 6EU . . . C 2 -37.089 14.603 21.727 1 116.18 ? HBU 6EU 1001 A 1 HETATM 53 H HBT 6EU . . . C 2 -35.022 14.024 20.802 1 107.35 ? HBT 6EU 1001 A 1 HETATM 54 H H4 6EU . . . C 2 -33.714 13.3 18.884 1 109.53 ? H4 6EU 1001 A 1 HETATM 55 H H5 6EU . . . C 2 -34.404 12.971 17.561 1 109.53 ? H5 6EU 1001 A 1 HETATM 56 H H6 6EU . . . C 2 -32.22 10.061 16.806 1 106.34 ? H6 6EU 1001 A 1 HETATM 57 H H7 6EU . . . C 2 -33.324 9.301 17.559 1 106.34 ? H7 6EU 1001 A 1 HETATM 58 H H8 6EU . . . C 2 -32.308 6.802 18.297 1 115.53 ? H8 6EU 1001 A 1 HETATM 59 H H9 6EU . . . C 2 -31.661 7.758 21.005 1 112.49 ? H9 6EU 1001 A 1 HETATM 60 H H10 6EU . . . C 2 -30.136 10.317 18.818 1 130.23 ? H10 6EU 1001 A 1 HETATM 61 H H11 6EU . . . C 2 -29.474 9.293 17.909 1 130.23 ? H11 6EU 1001 A 1 HETATM 62 H HAD 6EU . . . C 2 -29.85 9.972 21.15 1 121.61 ? HAD 6EU 1001 A 1 HETATM 63 H H12 6EU . . . C 2 -25.106 7.799 21.034 1 131.48 ? H12 6EU 1001 A 1 HETATM 64 H H13 6EU . . . C 2 -25.082 9.117 20.249 1 131.48 ? H13 6EU 1001 A 1 HETATM 65 H H14 6EU . . . C 2 -25.569 9.1 21.702 1 131.48 ? H14 6EU 1001 A 1 HETATM 66 H H15 6EU . . . C 2 -27.317 6.189 20.476 1 108.03 ? H15 6EU 1001 A 1 HETATM 67 H H16 6EU . . . C 2 -29.133 7.043 18.875 1 116.14 ? H16 6EU 1001 A 1 HETATM 68 H H17 6EU . . . C 2 -29.37 7.075 22.269 1 109.01 ? H17 6EU 1001 A 1 HETATM 69 H H18 6EU . . . C 2 -28.127 5.368 22.839 1 128.01 ? H18 6EU 1001 A 1 HETATM 70 H H19 6EU . . . C 2 -29.324 4.412 22.816 1 128.01 ? H19 6EU 1001 A 1 HETATM 71 H H20 6EU . . . C 2 -28.557 4.711 21.522 1 128.01 ? H20 6EU 1001 A 1 HETATM 72 H H21 6EU . . . C 2 -30.764 5.757 23.768 1 123.24 ? H21 6EU 1001 A 1 HETATM 73 H H22 6EU . . . C 2 -31.365 7.023 23.148 1 123.24 ? H22 6EU 1001 A 1 HETATM 74 H H24 6EU . . . C 2 -33.264 6.574 24.392 1 104.09 ? H24 6EU 1001 A 1 HETATM 75 H H25 6EU . . . C 2 -34.413 5.503 24.75 1 104.09 ? H25 6EU 1001 A 1 HETATM 76 H H27 6EU . . . C 2 -34.043 3.488 21.98 1 123.45 ? H27 6EU 1001 A 1 HETATM 77 H H28 6EU . . . C 2 -34.826 3.635 23.291 1 123.45 ? H28 6EU 1001 A 1 HETATM 78 H H29 6EU . . . C 2 -33.473 2.914 23.283 1 123.45 ? H29 6EU 1001 A 1 HETATM 79 H H30 6EU . . . C 2 -33.439 6.339 20.907 1 123.62 ? H30 6EU 1001 A 1 HETATM 80 H H31 6EU . . . C 2 -32.145 2.428 20.013 1 122.21 ? H31 6EU 1001 A 1 HETATM 81 H H32 6EU . . . C 2 -31.526 3.029 18.754 1 122.21 ? H32 6EU 1001 A 1 HETATM 82 H HBL 6EU . . . C 2 -29.368 2.285 18.072 1 128.59 ? HBL 6EU 1001 A 1 HETATM 83 H HBN 6EU . . . C 2 -27.419 1.06 18.436 1 129.59 ? HBN 6EU 1001 A 1 HETATM 84 H HBP 6EU . . . C 2 -27.003 0.137 20.532 1 139.8 ? HBP 6EU 1001 A 1 HETATM 85 H HBO 6EU . . . C 2 -28.511 0.429 22.25 1 140.55 ? HBO 6EU 1001 A 1 HETATM 86 H HBM 6EU . . . C 2 -30.459 1.651 21.894 1 127.82 ? HBM 6EU 1001 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 35 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 86 #