data_6BWY # _model_server_result.job_id spY4Vtjm055hmI6fZxOUaQ _model_server_result.datetime_utc '2024-11-22 05:11:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6bwy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"X","auth_seq_id":401}' # _entry.id 6BWY # _exptl.entry_id 6BWY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6BWY _cell.length_a 79.072 _cell.length_b 79.072 _cell.length_c 266.411 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BWY _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,I,M,N,O,P,BA,EA 1 1 B,H,J,X,Y,Z,AA,CA,HA 2 1 C,F,K,Q,R,S,DA,FA 3 1 D,G,L,T,U,V,W,GA 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 M N N ? 4 Q N N ? 4 T N N ? 4 X N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 E ND1 HIS 234 A HIS 257 1_555 M ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc2 E SG CYS 265 A CYS 288 1_555 M ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.638 ? metalc ? metalc3 E SG CYS 268 A CYS 291 1_555 M ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? metalc ? metalc4 F ND1 HIS 234 B HIS 257 1_555 Q ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc5 F SG CYS 265 B CYS 288 1_555 Q ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.919 ? metalc ? metalc6 G ND1 HIS 234 E HIS 257 1_555 T ZN ZN . E ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.939 ? metalc ? metalc7 G SG CYS 265 E CYS 288 1_555 T ZN ZN . E ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc8 H ND1 HIS 234 G HIS 257 1_555 X ZN ZN . G ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.796 ? metalc ? metalc9 H SG CYS 265 G CYS 288 1_555 X ZN ZN . G ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc10 H SG CYS 268 G CYS 291 1_555 X ZN ZN . G ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? hydrog 'DG-DT MISPAIR' hydrog1 B N2 DG 25 C DG 2 1_555 B O4 DT 27 C DT 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DG-DT MISPAIR' hydrog2 B N2 DG 26 C DG 3 1_555 B O4 DT 28 C DT 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DG-DT MISPAIR' hydrog3 C N2 DG 25 D DG 2 1_555 C O4 DT 27 D DT 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DG-DT MISPAIR' hydrog4 C N2 DG 26 D DG 3 1_555 C O4 DT 28 D DT 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DG-DT MISPAIR' hydrog5 D N2 DG 25 F DG 2 1_555 D O4 DT 27 F DT 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DG-DT MISPAIR' hydrog6 D N2 DG 26 F DG 3 1_555 D O4 DT 28 F DT 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DG-DT MISPAIR' hydrog7 A N2 DG 25 I DG 2 1_555 A O4 DT 27 I DT 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DG-DT MISPAIR' hydrog8 A N2 DG 26 I DG 3 1_555 A O4 DT 28 I DT 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6BWY _atom_sites.fract_transf_matrix[1][1] 0.012647 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012647 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003754 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 PO4 I 1 101 4 PO4 PO4 . J 3 PO4 C 1 101 1 PO4 PO4 . K 3 PO4 D 1 101 10 PO4 PO4 . L 3 PO4 F 1 101 7 PO4 PO4 . M 4 ZN A 1 401 1 ZN ZN . N 3 PO4 A 1 402 5 PO4 PO4 . O 3 PO4 A 1 403 6 PO4 PO4 . P 3 PO4 A 1 404 15 PO4 PO4 . Q 4 ZN B 1 401 2 ZN ZN . R 3 PO4 B 1 402 11 PO4 PO4 . S 3 PO4 B 1 403 12 PO4 PO4 . T 4 ZN E 1 401 3 ZN ZN . U 3 PO4 E 1 402 8 PO4 PO4 . V 3 PO4 E 1 403 9 PO4 PO4 . W 3 PO4 E 1 404 14 PO4 PO4 . X 4 ZN G 1 401 4 ZN ZN . Y 3 PO4 G 1 402 2 PO4 PO4 . Z 3 PO4 G 1 403 3 PO4 PO4 . AA 3 PO4 G 1 404 13 PO4 PO4 . BA 5 HOH I 1 201 32 HOH HOH . CA 5 HOH C 1 201 8 HOH HOH . DA 5 HOH D 1 201 30 HOH HOH . EA 5 HOH A 1 501 59 HOH HOH . EA 5 HOH A 2 502 2 HOH HOH . EA 5 HOH A 3 503 48 HOH HOH . EA 5 HOH A 4 504 28 HOH HOH . EA 5 HOH A 5 505 63 HOH HOH . EA 5 HOH A 6 506 45 HOH HOH . EA 5 HOH A 7 507 41 HOH HOH . EA 5 HOH A 8 508 16 HOH HOH . EA 5 HOH A 9 509 40 HOH HOH . EA 5 HOH A 10 510 52 HOH HOH . EA 5 HOH A 11 511 47 HOH HOH . FA 5 HOH B 1 501 5 HOH HOH . FA 5 HOH B 2 502 31 HOH HOH . FA 5 HOH B 3 503 6 HOH HOH . FA 5 HOH B 4 504 43 HOH HOH . FA 5 HOH B 5 505 39 HOH HOH . FA 5 HOH B 6 506 36 HOH HOH . FA 5 HOH B 7 507 61 HOH HOH . FA 5 HOH B 8 508 24 HOH HOH . FA 5 HOH B 9 509 50 HOH HOH . FA 5 HOH B 10 510 51 HOH HOH . FA 5 HOH B 11 511 23 HOH HOH . FA 5 HOH B 12 512 33 HOH HOH . FA 5 HOH B 13 513 37 HOH HOH . GA 5 HOH E 1 501 27 HOH HOH . GA 5 HOH E 2 502 60 HOH HOH . GA 5 HOH E 3 503 49 HOH HOH . GA 5 HOH E 4 504 55 HOH HOH . GA 5 HOH E 5 505 62 HOH HOH . GA 5 HOH E 6 506 46 HOH HOH . GA 5 HOH E 7 507 7 HOH HOH . GA 5 HOH E 8 508 25 HOH HOH . GA 5 HOH E 9 509 21 HOH HOH . GA 5 HOH E 10 510 18 HOH HOH . GA 5 HOH E 11 511 12 HOH HOH . GA 5 HOH E 12 512 29 HOH HOH . GA 5 HOH E 13 513 44 HOH HOH . GA 5 HOH E 14 514 54 HOH HOH . HA 5 HOH G 1 501 14 HOH HOH . HA 5 HOH G 2 502 3 HOH HOH . HA 5 HOH G 3 503 56 HOH HOH . HA 5 HOH G 4 504 1 HOH HOH . HA 5 HOH G 5 505 17 HOH HOH . HA 5 HOH G 6 506 38 HOH HOH . HA 5 HOH G 7 507 58 HOH HOH . HA 5 HOH G 8 508 53 HOH HOH . HA 5 HOH G 9 509 34 HOH HOH . HA 5 HOH G 10 510 35 HOH HOH . HA 5 HOH G 11 511 57 HOH HOH . HA 5 HOH G 12 512 42 HOH HOH . HA 5 HOH G 13 513 20 HOH HOH . HA 5 HOH G 14 514 22 HOH HOH . HA 5 HOH G 15 515 10 HOH HOH . HA 5 HOH G 16 516 4 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id X _atom_site.label_entity_id 4 _atom_site.Cartn_x 97.123 _atom_site.Cartn_y 123.964 _atom_site.Cartn_z -10.058 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 104.83 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id G _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #