data_6BX6 # _model_server_result.job_id wyYCVOXgjOoMHU1wLR9cKQ _model_server_result.datetime_utc '2025-01-05 03:04:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6bx6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6BX6 # _exptl.entry_id 6BX6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 489.319 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-({5-bromo-2-[(3,4,5-trimethoxyphenyl)amino]pyrimidin-4-yl}oxy)-N-methylbenzene-1-carboximidic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.25 _cell.angle_gamma 90 _cell.entry_id 6BX6 _cell.length_a 38.43 _cell.length_b 54.783 _cell.length_c 143.188 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BX6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H21 Br N4 O5' _chem_comp.formula_weight 489.319 _chem_comp.id EDJ _chem_comp.mon_nstd_flag . _chem_comp.name '2-({5-bromo-2-[(3,4,5-trimethoxyphenyl)amino]pyrimidin-4-yl}oxy)-N-methylbenzene-1-carboximidic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAD OAT EDJ sing 83 n n CAB OAR EDJ sing 84 n n OAS CBB EDJ sing 85 n n OAS CAC EDJ sing 86 n n CAM CBB EDJ doub 87 n y CAM CAW EDJ sing 88 n y CBB CBE EDJ sing 89 n y NAQ CAW EDJ sing 90 n n NAQ C2 EDJ sing 91 n n CAW CAL EDJ doub 92 n y CBE OAT EDJ sing 93 n n CBE CBA EDJ doub 94 n y CAL CBA EDJ sing 95 n y CBA OAR EDJ sing 96 n n CAH CAG EDJ doub 97 n y CAH CAJ EDJ sing 98 n y CAG CAI EDJ sing 99 n y C2 N1 EDJ doub 100 n y C2 N3 EDJ sing 101 n y N1 C6 EDJ sing 102 n y CAJ CBC EDJ doub 103 n y CAI CAZ EDJ doub 104 n y N3 C4 EDJ doub 105 n y C6 C5 EDJ doub 106 n y CBC CAZ EDJ sing 107 n y CBC CAV EDJ sing 108 n n CAZ OAU EDJ sing 109 n n C4 C5 EDJ sing 110 n y C4 OAU EDJ sing 111 n n C5 BR5 EDJ sing 112 n n CAV OAE EDJ doub 113 n n CAV NAP EDJ sing 114 n n NAP CAA EDJ sing 115 n n C6 H1 EDJ sing 116 n n CAB H2 EDJ sing 117 n n CAB H3 EDJ sing 118 n n CAB H4 EDJ sing 119 n n CAL H5 EDJ sing 120 n n CAD H6 EDJ sing 121 n n CAD H7 EDJ sing 122 n n CAD H8 EDJ sing 123 n n CAC H9 EDJ sing 124 n n CAC H10 EDJ sing 125 n n CAC H11 EDJ sing 126 n n CAM H12 EDJ sing 127 n n NAQ H13 EDJ sing 128 n n CAI H14 EDJ sing 129 n n CAG H15 EDJ sing 130 n n CAH H16 EDJ sing 131 n n CAJ H17 EDJ sing 132 n n CAA H19 EDJ sing 133 n n CAA H20 EDJ sing 134 n n CAA H21 EDJ sing 135 n n NAP H18 EDJ sing 136 n n # _atom_sites.entry_id 6BX6 _atom_sites.fract_transf_matrix[1][1] 0.026021 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00285 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018254 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007026 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id EDJ _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 301 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id EDJ _pdbx_nonpoly_scheme.auth_mon_id DRG _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 EDJ . A . B 2 52.151 -42.164 33.102 0.5 127.19 ? C4 EDJ 301 A 1 HETATM 2 C C4 EDJ . B . B 2 51.987 -42.459 32.963 0.5 125.44 ? C4 EDJ 301 A 1 HETATM 3 C C5 EDJ . A . B 2 52.854 -43.341 33.313 0.5 127.45 ? C5 EDJ 301 A 1 HETATM 4 C C5 EDJ . B . B 2 52.857 -43.45 33.372 0.5 125.56 ? C5 EDJ 301 A 1 HETATM 5 C C6 EDJ . A . B 2 54.093 -43.475 32.717 0.5 126.59 ? C6 EDJ 301 A 1 HETATM 6 C C6 EDJ . B . B 2 54.177 -43.384 32.983 0.5 124.78 ? C6 EDJ 301 A 1 HETATM 7 N N1 EDJ . A . B 2 54.572 -42.427 31.938 0.5 126.12 ? N1 EDJ 301 A 1 HETATM 8 N N1 EDJ . B . B 2 54.564 -42.313 32.188 0.5 124.39 ? N1 EDJ 301 A 1 HETATM 9 N N3 EDJ . A . B 2 52.655 -41.18 32.346 0.5 126.69 ? N3 EDJ 301 A 1 HETATM 10 N N3 EDJ . B . B 2 52.403 -41.441 32.193 0.5 124.97 ? N3 EDJ 301 A 1 HETATM 11 C CAB EDJ . A . B 2 49.938 -36.976 30.403 0.5 126.33 ? CAB EDJ 301 A 1 HETATM 12 C CAB EDJ . B . B 2 49.846 -36.893 30.399 0.5 124.67 ? CAB EDJ 301 A 1 HETATM 13 O OAR EDJ . A . B 2 50.567 -37.496 31.574 0.5 126.31 ? OAR EDJ 301 A 1 HETATM 14 O OAR EDJ . B . B 2 50.446 -37.429 31.578 0.5 124.7 ? OAR EDJ 301 A 1 HETATM 15 C CBA EDJ . A . B 2 51.881 -37.731 31.333 0.5 126.45 ? CBA EDJ 301 A 1 HETATM 16 C CBA EDJ . B . B 2 51.753 -37.708 31.349 0.5 124.95 ? CBA EDJ 301 A 1 HETATM 17 C CAL EDJ . A . B 2 52.439 -39.003 31.306 0.5 126.48 ? CAL EDJ 301 A 1 HETATM 18 C CAL EDJ . B . B 2 52.265 -38.999 31.327 0.5 124.99 ? CAL EDJ 301 A 1 HETATM 19 C CBE EDJ . A . B 2 52.681 -36.628 31.113 0.5 126.53 ? CBE EDJ 301 A 1 HETATM 20 C CBE EDJ . B . B 2 52.592 -36.633 31.135 0.5 125.17 ? CBE EDJ 301 A 1 HETATM 21 O OAT EDJ . A . B 2 52.122 -35.392 31.153 0.5 126.4 ? OAT EDJ 301 A 1 HETATM 22 O OAT EDJ . B . B 2 52.075 -35.378 31.169 0.5 125.15 ? OAT EDJ 301 A 1 HETATM 23 C CAD EDJ . A . B 2 52.31 -34.691 29.925 0.5 126.47 ? CAD EDJ 301 A 1 HETATM 24 C CAD EDJ . B . B 2 52.3 -34.683 29.943 0.5 125.24 ? CAD EDJ 301 A 1 HETATM 25 C CBB EDJ . A . B 2 54.034 -36.762 30.868 0.5 126.68 ? CBB EDJ 301 A 1 HETATM 26 C CBB EDJ . B . B 2 53.941 -36.812 30.901 0.5 125.3 ? CBB EDJ 301 A 1 HETATM 27 O OAS EDJ . A . B 2 54.74 -35.623 30.66 0.5 126.99 ? OAS EDJ 301 A 1 HETATM 28 O OAS EDJ . B . B 2 54.689 -35.699 30.698 0.5 125.61 ? OAS EDJ 301 A 1 HETATM 29 C CAC EDJ . A . B 2 54.77 -34.826 31.847 0.5 127.1 ? CAC EDJ 301 A 1 HETATM 30 C CAC EDJ . B . B 2 54.733 -34.898 31.88 0.5 125.74 ? CAC EDJ 301 A 1 HETATM 31 C CAM EDJ . A . B 2 54.6 -38.025 30.831 0.5 126.49 ? CAM EDJ 301 A 1 HETATM 32 C CAM EDJ . B . B 2 54.462 -38.094 30.871 0.5 125.04 ? CAM EDJ 301 A 1 HETATM 33 C CAW EDJ . A . B 2 53.802 -39.143 31.055 0.5 126.43 ? CAW EDJ 301 A 1 HETATM 34 C CAW EDJ . B . B 2 53.625 -39.183 31.092 0.5 124.91 ? CAW EDJ 301 A 1 HETATM 35 N NAQ EDJ . A . B 2 54.361 -40.346 31.016 0.5 126.31 ? NAQ EDJ 301 A 1 HETATM 36 N NAQ EDJ . B . B 2 54.159 -40.397 31.049 0.5 124.71 ? NAQ EDJ 301 A 1 HETATM 37 C C2 EDJ . A . B 2 53.855 -41.312 31.771 0.5 126.26 ? C2 EDJ 301 A 1 HETATM 38 C C2 EDJ . B . B 2 53.69 -41.373 31.818 0.5 124.58 ? C2 EDJ 301 A 1 HETATM 39 BR BR5 EDJ . A . B 2 52.177 -44.728 34.363 0.5 128.47 ? BR5 EDJ 301 A 1 HETATM 40 BR BR5 EDJ . B . B 2 52.237 -44.836 34.428 0.5 126.36 ? BR5 EDJ 301 A 1 HETATM 41 O OAU EDJ . A . B 2 50.938 -42.061 33.704 0.5 127.38 ? OAU EDJ 301 A 1 HETATM 42 O OAU EDJ . B . B 2 50.714 -42.635 33.401 0.5 125.72 ? OAU EDJ 301 A 1 HETATM 43 C CAZ EDJ . A . B 2 49.99 -42.64 32.928 0.5 127.57 ? CAZ EDJ 301 A 1 HETATM 44 C CAZ EDJ . B . B 2 49.925 -41.535 33.41 0.5 125.94 ? CAZ EDJ 301 A 1 HETATM 45 C CAI EDJ . A . B 2 50.188 -43.867 32.316 0.5 127.37 ? CAI EDJ 301 A 1 HETATM 46 C CAI EDJ . B . B 2 50.319 -40.339 33.989 0.5 125.82 ? CAI EDJ 301 A 1 HETATM 47 C CAG EDJ . A . B 2 49.177 -44.405 31.532 0.5 127.56 ? CAG EDJ 301 A 1 HETATM 48 C CAG EDJ . B . B 2 49.448 -39.258 33.97 0.5 125.93 ? CAG EDJ 301 A 1 HETATM 49 C CAH EDJ . A . B 2 47.984 -43.716 31.37 0.5 127.9 ? CAH EDJ 301 A 1 HETATM 50 C CAH EDJ . B . B 2 48.196 -39.382 33.384 0.5 126.06 ? CAH EDJ 301 A 1 HETATM 51 C CAJ EDJ . A . B 2 47.796 -42.488 31.989 0.5 128.16 ? CAJ EDJ 301 A 1 HETATM 52 C CAJ EDJ . B . B 2 47.808 -40.587 32.813 0.5 126.19 ? CAJ EDJ 301 A 1 HETATM 53 C CBC EDJ . A . B 2 48.802 -41.941 32.773 0.5 128.08 ? CBC EDJ 301 A 1 HETATM 54 C CBC EDJ . B . B 2 48.673 -41.672 32.828 0.5 126.4 ? CBC EDJ 301 A 1 HETATM 55 C CAV EDJ . A . B 2 48.593 -40.708 33.384 0.5 128.31 ? CAV EDJ 301 A 1 HETATM 56 C CAV EDJ . B . B 2 48.279 -42.875 32.254 0.5 126.85 ? CAV EDJ 301 A 1 HETATM 57 O OAE EDJ . A . B 2 47.46 -40.241 33.467 0.5 128.34 ? OAE EDJ 301 A 1 HETATM 58 O OAE EDJ . B . B 2 49.088 -43.61 31.692 0.5 126.84 ? OAE EDJ 301 A 1 HETATM 59 N NAP EDJ . A . B 2 49.688 -40.089 33.844 0.5 128.48 ? NAP EDJ 301 A 1 HETATM 60 N NAP EDJ . B . B 2 46.973 -43.146 32.36 0.5 127.04 ? NAP EDJ 301 A 1 HETATM 61 C CAA EDJ . A . B 2 49.494 -38.783 34.489 0.5 128.52 ? CAA EDJ 301 A 1 HETATM 62 C CAA EDJ . B . B 2 46.502 -44.403 31.765 0.5 126.93 ? CAA EDJ 301 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 62 #