data_6BXG # _model_server_result.job_id 23AOwiNMuddW-yeojtVx2Q _model_server_result.datetime_utc '2024-11-25 15:05:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6bxg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":408}' # _entry.id 6BXG # _exptl.entry_id 6BXG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6BXG _cell.length_a 35.579 _cell.length_b 35.579 _cell.length_c 118.394 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BXG _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,N,O 1 1 B 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLN 15 A GLN 254 1_555 A N MSE 16 A MSE 255 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C GLN 15 A GLN 254 1_555 A N MSE 16 A MSE 255 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.326 ? covale ? covale3 A C MSE 16 A MSE 255 1_555 A N THR 17 A THR 256 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 A C MSE 16 A MSE 255 1_555 A N THR 17 A THR 256 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.337 ? # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6BXG _atom_sites.fract_transf_matrix[1][1] 0.028106 _atom_sites.fract_transf_matrix[1][2] 0.016227 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.032455 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008446 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CL A 1 401 1 CL CL . D 3 CL A 1 402 2 CL CL . E 4 IOD A 1 403 3 IOD IOD . F 4 IOD A 1 404 4 IOD IOD . G 4 IOD A 1 405 5 IOD IOD . H 4 IOD A 1 406 6 IOD IOD . I 4 IOD A 1 407 7 IOD IOD . J 4 IOD A 1 408 8 IOD IOD . K 4 IOD A 1 409 9 IOD IOD . L 4 IOD A 1 410 10 IOD IOD . M 4 IOD A 1 411 11 IOD IOD . N 4 IOD A 1 412 12 IOD IOD . O 5 HOH A 1 501 85 HOH HOH . O 5 HOH A 2 502 90 HOH HOH . O 5 HOH A 3 503 50 HOH HOH . O 5 HOH A 4 504 95 HOH HOH . O 5 HOH A 5 505 35 HOH HOH . O 5 HOH A 6 506 89 HOH HOH . O 5 HOH A 7 507 92 HOH HOH . O 5 HOH A 8 508 36 HOH HOH . O 5 HOH A 9 509 94 HOH HOH . O 5 HOH A 10 510 96 HOH HOH . O 5 HOH A 11 511 22 HOH HOH . O 5 HOH A 12 512 24 HOH HOH . O 5 HOH A 13 513 84 HOH HOH . O 5 HOH A 14 514 17 HOH HOH . O 5 HOH A 15 515 29 HOH HOH . O 5 HOH A 16 516 32 HOH HOH . O 5 HOH A 17 517 86 HOH HOH . O 5 HOH A 18 518 18 HOH HOH . O 5 HOH A 19 519 31 HOH HOH . O 5 HOH A 20 520 38 HOH HOH . O 5 HOH A 21 521 55 HOH HOH . O 5 HOH A 22 522 28 HOH HOH . O 5 HOH A 23 523 19 HOH HOH . O 5 HOH A 24 524 48 HOH HOH . O 5 HOH A 25 525 13 HOH HOH . O 5 HOH A 26 526 33 HOH HOH . O 5 HOH A 27 527 43 HOH HOH . O 5 HOH A 28 528 34 HOH HOH . O 5 HOH A 29 529 14 HOH HOH . O 5 HOH A 30 530 44 HOH HOH . O 5 HOH A 31 531 75 HOH HOH . O 5 HOH A 32 532 45 HOH HOH . O 5 HOH A 33 533 81 HOH HOH . O 5 HOH A 34 534 70 HOH HOH . O 5 HOH A 35 535 42 HOH HOH . O 5 HOH A 36 536 87 HOH HOH . O 5 HOH A 37 537 41 HOH HOH . O 5 HOH A 38 538 27 HOH HOH . O 5 HOH A 39 539 54 HOH HOH . O 5 HOH A 40 540 52 HOH HOH . O 5 HOH A 41 541 15 HOH HOH . O 5 HOH A 42 542 49 HOH HOH . O 5 HOH A 43 543 25 HOH HOH . O 5 HOH A 44 544 23 HOH HOH . O 5 HOH A 45 545 61 HOH HOH . O 5 HOH A 46 546 16 HOH HOH . O 5 HOH A 47 547 72 HOH HOH . O 5 HOH A 48 548 63 HOH HOH . O 5 HOH A 49 549 68 HOH HOH . O 5 HOH A 50 550 53 HOH HOH . O 5 HOH A 51 551 62 HOH HOH . O 5 HOH A 52 552 26 HOH HOH . O 5 HOH A 53 553 21 HOH HOH . O 5 HOH A 54 554 77 HOH HOH . O 5 HOH A 55 555 74 HOH HOH . O 5 HOH A 56 556 60 HOH HOH . O 5 HOH A 57 557 69 HOH HOH . O 5 HOH A 58 558 79 HOH HOH . O 5 HOH A 59 559 39 HOH HOH . O 5 HOH A 60 560 51 HOH HOH . O 5 HOH A 61 561 47 HOH HOH . O 5 HOH A 62 562 67 HOH HOH . O 5 HOH A 63 563 20 HOH HOH . O 5 HOH A 64 564 65 HOH HOH . O 5 HOH A 65 565 30 HOH HOH . O 5 HOH A 66 566 58 HOH HOH . O 5 HOH A 67 567 71 HOH HOH . O 5 HOH A 68 568 76 HOH HOH . O 5 HOH A 69 569 64 HOH HOH . O 5 HOH A 70 570 57 HOH HOH . O 5 HOH A 71 571 73 HOH HOH . O 5 HOH A 72 572 88 HOH HOH . O 5 HOH A 73 573 59 HOH HOH . O 5 HOH A 74 574 46 HOH HOH . O 5 HOH A 75 575 83 HOH HOH . O 5 HOH A 76 576 66 HOH HOH . O 5 HOH A 77 577 78 HOH HOH . O 5 HOH A 78 578 80 HOH HOH . O 5 HOH A 79 579 82 HOH HOH . O 5 HOH A 80 580 40 HOH HOH . O 5 HOH A 81 581 91 HOH HOH . O 5 HOH A 82 582 37 HOH HOH . O 5 HOH A 83 583 93 HOH HOH . O 5 HOH A 84 584 97 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 I I IOD . A . J 4 -16.491 8.322 -2.016 0.4 108.03 ? I IOD 408 A 1 HETATM 2 I I IOD . B . J 4 -15.248 6.68 -2.403 0.3 131.43 ? I IOD 408 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 235 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 2 #